Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749071
Identifier: 86749071
GI number: 86749071
Start: 2215371
End: 2215835
Strand: Direct
Name: 86749071
Synonym: RPB_1948
Alternate gene names: NA
Gene position: 2215371-2215835 (Clockwise)
Preceding gene: 86749069
Following gene: 86749072
Centisome position: 41.55
GC content: 68.82
Gene sequence:
>465_bases ATGTCGATGGAAATCTACGTGTTCTCGGACCAGAGACTGACCACGATCGAGGACTGGCAGCAGGCGCTCGATCGCCGCGG CGCGCCGCTGCGTCTCTCCGCCGCCCGGCCGTTCGCGGAGCTCAACGGCGCGCTGCCGGCGGTGCTGCGCGATCGACCGA CGGCGTTCGAATGCGATCATTTCGACGCCGGTGAACTGATGGACGAGGCGGAGGACGTCGCGTTCGACCATCGCTGGCGC CACGCGCTGGCGTTCCGCTGGGGCGCCGATCTGGCGGCCGGCGAGGCGGCCTATCTGGCGGCCGCCGCCTATGCCGACGC CACCGGCGGCTGCATCTTCGACTGCGAAGAGGGCGCGCTGATCACGCCGGATCGTGCCACCGAAATCGCCGCCGAGCTGC AGAAGAGCGGACCGATGATCGAGGAGGTGATCCGTCGGACGCAACAACGCTTCGGCGAGCCGTGA
Upstream 100 bases:
>100_bases TTACCGTTTTGCGGGTGTCGCCGACGTCATCGCTCGGCGGCAGGCCGCGCATCGCCGGACCGCGGTCGCGCGCCGCCGAT GCGGATCAGGAGCAACCGAC
Downstream 100 bases:
>100_bases GAGCGTCGCGTCGTCGCCTGCGTGGAGCGAAGCGAACGCGCGGGTGGGCGCGGCGGTGGGGAACTCGCGCAGCACCGCAA CGGCATCGCACGGAAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSMEIYVFSDQRLTTIEDWQQALDRRGAPLRLSAARPFAELNGALPAVLRDRPTAFECDHFDAGELMDEAEDVAFDHRWR HALAFRWGADLAAGEAAYLAAAAYADATGGCIFDCEEGALITPDRATEIAAELQKSGPMIEEVIRRTQQRFGEP
Sequences:
>Translated_154_residues MSMEIYVFSDQRLTTIEDWQQALDRRGAPLRLSAARPFAELNGALPAVLRDRPTAFECDHFDAGELMDEAEDVAFDHRWR HALAFRWGADLAAGEAAYLAAAAYADATGGCIFDCEEGALITPDRATEIAAELQKSGPMIEEVIRRTQQRFGEP >Mature_153_residues SMEIYVFSDQRLTTIEDWQQALDRRGAPLRLSAARPFAELNGALPAVLRDRPTAFECDHFDAGELMDEAEDVAFDHRWRH ALAFRWGADLAAGEAAYLAAAAYADATGGCIFDCEEGALITPDRATEIAAELQKSGPMIEEVIRRTQQRFGEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17076; Mature: 16945
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMEIYVFSDQRLTTIEDWQQALDRRGAPLRLSAARPFAELNGALPAVLRDRPTAFECDH CCEEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCHHHCCCCCEECCCC FDAGELMDEAEDVAFDHRWRHALAFRWGADLAAGEAAYLAAAAYADATGGCIFDCEEGAL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCE ITPDRATEIAAELQKSGPMIEEVIRRTQQRFGEP ECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SMEIYVFSDQRLTTIEDWQQALDRRGAPLRLSAARPFAELNGALPAVLRDRPTAFECDH CEEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCHHHCCCCCEECCCC FDAGELMDEAEDVAFDHRWRHALAFRWGADLAAGEAAYLAAAAYADATGGCIFDCEEGAL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCE ITPDRATEIAAELQKSGPMIEEVIRRTQQRFGEP ECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA