Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is sseA [H]
Identifier: 86749038
GI number: 86749038
Start: 2188485
End: 2189342
Strand: Direct
Name: sseA [H]
Synonym: RPB_1915
Alternate gene names: 86749038
Gene position: 2188485-2189342 (Clockwise)
Preceding gene: 86749037
Following gene: 86749040
Centisome position: 41.05
GC content: 67.83
Gene sequence:
>858_bases ATGACTGCCATTGAAGATCCGTTGGTCTCCACCGATTGGCTTGCCGCGCATCTCGGCGATCCCCAGGTCAAGGTGCTCGA CGCCTCGTTCAAGATGCCGGGCGTGCTGCCGCGGCCCGGCGACGATTATCTCGCGGCGCACATTCCCGGCGCGGTGTATT TCGACGTCGAGGAAGTCTGCGACCGCGCCGATGCGCGGCCGCATATGTATCCGGACGCGGCGCAGTTCGCGCGCGACGTC GCGGCGATGGGCGTCTCGTCTGGCGATACCGTAGTCGTCTACGATGCCGGCGGCTGGGTCGCAGCGCCCCGGGCGTGGTG GATGTTCCTGTCTTTCGGCCACGCCGACGTTCGCATCCTCGAGGGCGGCCTGAAGAAGTGGCAGGCGGAAGACCGGCCGA CCGAGTCAGGAAAGCCGTCGCCGAAGCCGGGCGTCTTCACCGCAACGCTCGATCCGACCTATCTACGCAGCAAGGAGCAG TTGGTCGCCAATTTCGACAGCGGCGCCGAGCAGGTGATCGACGCTCGTGCCGCCGATCGGTTCGAGGGCCGCGTGCCGGA GCCGCGCCCCGGCCTGCGCGCGGGCCATATCCCGGGCAGCCGCAATCTGCCTTACAACGAACTGTTCGACGCCGCGACCG GGCTGATGAAGTCACGCGATGAGTTGCGGAAGGCTTTCGTCCGGGCCGGCGTCGATCTCGACGGCCCGATCGTCACCAGT TGCGGCTCGGGCGTGTCGGCGCTGGTGTTGACGCTGGCATTGTACCGGCTCGGCGTCCGCGGCACCGCGCTGTACGACGG CTCTTGGTCGGAGTGGGGGATGCCGGATGGTCCGCCGATCGCGACGGGGCCGGCTTAG
Upstream 100 bases:
>100_bases GCGCGGACTTGACCGGCGTCGCTGTTTTCTCAATGACGATGCCGCGCCGCAGAGTTTCCGGCGATGTTGTGTTTCATTCG CCTGCGGCGGAGACTTCCCG
Downstream 100 bases:
>100_bases GCCTAGCCCGCCTCAGGTCGGCGGCAGGCCGAACGGCGATTCCTCGGAAGACGGCCGGGCGACGACCGGACGCCGGCGCC GCTCCTCGGCCTGACGGCGC
Product: 3-mercaptopyruvate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTAIEDPLVSTDWLAAHLGDPQVKVLDASFKMPGVLPRPGDDYLAAHIPGAVYFDVEEVCDRADARPHMYPDAAQFARDV AAMGVSSGDTVVVYDAGGWVAAPRAWWMFLSFGHADVRILEGGLKKWQAEDRPTESGKPSPKPGVFTATLDPTYLRSKEQ LVANFDSGAEQVIDARAADRFEGRVPEPRPGLRAGHIPGSRNLPYNELFDAATGLMKSRDELRKAFVRAGVDLDGPIVTS CGSGVSALVLTLALYRLGVRGTALYDGSWSEWGMPDGPPIATGPA
Sequences:
>Translated_285_residues MTAIEDPLVSTDWLAAHLGDPQVKVLDASFKMPGVLPRPGDDYLAAHIPGAVYFDVEEVCDRADARPHMYPDAAQFARDV AAMGVSSGDTVVVYDAGGWVAAPRAWWMFLSFGHADVRILEGGLKKWQAEDRPTESGKPSPKPGVFTATLDPTYLRSKEQ LVANFDSGAEQVIDARAADRFEGRVPEPRPGLRAGHIPGSRNLPYNELFDAATGLMKSRDELRKAFVRAGVDLDGPIVTS CGSGVSALVLTLALYRLGVRGTALYDGSWSEWGMPDGPPIATGPA >Mature_284_residues TAIEDPLVSTDWLAAHLGDPQVKVLDASFKMPGVLPRPGDDYLAAHIPGAVYFDVEEVCDRADARPHMYPDAAQFARDVA AMGVSSGDTVVVYDAGGWVAAPRAWWMFLSFGHADVRILEGGLKKWQAEDRPTESGKPSPKPGVFTATLDPTYLRSKEQL VANFDSGAEQVIDARAADRFEGRVPEPRPGLRAGHIPGSRNLPYNELFDAATGLMKSRDELRKAFVRAGVDLDGPIVTSC GSGVSALVLTLALYRLGVRGTALYDGSWSEWGMPDGPPIATGPA
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI194473668, Length=273, Percent_Identity=42.1245421245421, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI61835204, Length=273, Percent_Identity=42.1245421245421, Blast_Score=222, Evalue=2e-58, Organism=Homo sapiens, GI194473681, Length=273, Percent_Identity=42.1245421245421, Blast_Score=222, Evalue=2e-58, Organism=Homo sapiens, GI17402865, Length=272, Percent_Identity=43.0147058823529, Blast_Score=205, Evalue=3e-53, Organism=Escherichia coli, GI87082121, Length=268, Percent_Identity=45.5223880597015, Blast_Score=228, Evalue=4e-61, Organism=Escherichia coli, GI87081967, Length=273, Percent_Identity=26.3736263736264, Blast_Score=74, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17561888, Length=292, Percent_Identity=28.4246575342466, Blast_Score=104, Evalue=6e-23, Organism=Caenorhabditis elegans, GI115534702, Length=212, Percent_Identity=30.188679245283, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17543836, Length=291, Percent_Identity=27.4914089347079, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17543838, Length=291, Percent_Identity=27.4914089347079, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71997283, Length=294, Percent_Identity=25.8503401360544, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17559150, Length=278, Percent_Identity=25.8992805755396, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6324825, Length=271, Percent_Identity=32.1033210332103, Blast_Score=138, Evalue=1e-33,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 30607; Mature: 30476
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIEDPLVSTDWLAAHLGDPQVKVLDASFKMPGVLPRPGDDYLAAHIPGAVYFDVEEVC CCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEECHHHHH DRADARPHMYPDAAQFARDVAAMGVSSGDTVVVYDAGGWVAAPRAWWMFLSFGHADVRIL HHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEECCHHEEHHHHCCCCCEEEH EGGLKKWQAEDRPTESGKPSPKPGVFTATLDPTYLRSKEQLVANFDSGAEQVIDARAADR HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHCHHHHHHHCCCHHHHHHHHHHHHH FEGRVPEPRPGLRAGHIPGSRNLPYNELFDAATGLMKSRDELRKAFVRAGVDLDGPIVTS HCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC CGSGVSALVLTLALYRLGVRGTALYDGSWSEWGMPDGPPIATGPA CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAIEDPLVSTDWLAAHLGDPQVKVLDASFKMPGVLPRPGDDYLAAHIPGAVYFDVEEVC CCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEECHHHHH DRADARPHMYPDAAQFARDVAAMGVSSGDTVVVYDAGGWVAAPRAWWMFLSFGHADVRIL HHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEECCHHEEHHHHCCCCCEEEH EGGLKKWQAEDRPTESGKPSPKPGVFTATLDPTYLRSKEQLVANFDSGAEQVIDARAADR HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHCHHHHHHHCCCHHHHHHHHHHHHH FEGRVPEPRPGLRAGHIPGSRNLPYNELFDAATGLMKSRDELRKAFVRAGVDLDGPIVTS HCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC CGSGVSALVLTLALYRLGVRGTALYDGSWSEWGMPDGPPIATGPA CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]