| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748819
Identifier: 86748819
GI number: 86748819
Start: 1932392
End: 1932772
Strand: Reverse
Name: 86748819
Synonym: RPB_1696
Alternate gene names: NA
Gene position: 1932772-1932392 (Counterclockwise)
Preceding gene: 86748821
Following gene: 86748814
Centisome position: 36.25
GC content: 65.09
Gene sequence:
>381_bases ATGAGCGATCCTGTGACGTTATTCCCCAACCTGTTGCCCGCAGCTCGAACTTACGGCCCCGTCGGAGTGAAGTTCTGGGA GGGCGAGGAAGCCATTCTGGCGGGCATGAAGGAGTTCGCGGACGGCTGGTTCGAGCGTCGGCGGATTGGAACCCACGCCG CACTGGAAACCGCGCGTCGGATGAGCGAAGCGGCAACGCCACTCGATGCGGTGCGCGAGTATCAGGACTGGCTGAGCGGC GCGGCCGCACGGGTGCTCGAAGACGGCATCGCCTGTCAGCAACAATTCCTCAAAGCCAATGCCCGGCTGGCGCCGCATCT GCCGCACACCTCAAAGGCCGAGGCGCCGCCTCCGGAAGCGGATGATCGCCTGAGCGCCTGA
Upstream 100 bases:
>100_bases TCGTTCATCGGGTTGTGATCACTCCCGTGCCGCAATCGGCGTTTATTGCTCCAAGTGCGACTTAGCGATTTGATTTCACC GGTCACCACGGAGATTTCAG
Downstream 100 bases:
>100_bases CTGCCGCGCATCGTAAATAACAGCGCCCATGACCAGTCATGCGCGCGTCGGCTTTTTATGGTCGGAGCGTTGCTGTGGCT CGTCGCCCGACTCCGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSDPVTLFPNLLPAARTYGPVGVKFWEGEEAILAGMKEFADGWFERRRIGTHAALETARRMSEAATPLDAVREYQDWLSG AAARVLEDGIACQQQFLKANARLAPHLPHTSKAEAPPPEADDRLSA
Sequences:
>Translated_126_residues MSDPVTLFPNLLPAARTYGPVGVKFWEGEEAILAGMKEFADGWFERRRIGTHAALETARRMSEAATPLDAVREYQDWLSG AAARVLEDGIACQQQFLKANARLAPHLPHTSKAEAPPPEADDRLSA >Mature_125_residues SDPVTLFPNLLPAARTYGPVGVKFWEGEEAILAGMKEFADGWFERRRIGTHAALETARRMSEAATPLDAVREYQDWLSGA AARVLEDGIACQQQFLKANARLAPHLPHTSKAEAPPPEADDRLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13815; Mature: 13683
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPVTLFPNLLPAARTYGPVGVKFWEGEEAILAGMKEFADGWFERRRIGTHAALETARR CCCCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSEAATPLDAVREYQDWLSGAAARVLEDGIACQQQFLKANARLAPHLPHTSKAEAPPPEA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DDRLSA CCCCCC >Mature Secondary Structure SDPVTLFPNLLPAARTYGPVGVKFWEGEEAILAGMKEFADGWFERRRIGTHAALETARR CCCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSEAATPLDAVREYQDWLSGAAARVLEDGIACQQQFLKANARLAPHLPHTSKAEAPPPEA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DDRLSA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA