Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86748819

Identifier: 86748819

GI number: 86748819

Start: 1932392

End: 1932772

Strand: Reverse

Name: 86748819

Synonym: RPB_1696

Alternate gene names: NA

Gene position: 1932772-1932392 (Counterclockwise)

Preceding gene: 86748821

Following gene: 86748814

Centisome position: 36.25

GC content: 65.09

Gene sequence:

>381_bases
ATGAGCGATCCTGTGACGTTATTCCCCAACCTGTTGCCCGCAGCTCGAACTTACGGCCCCGTCGGAGTGAAGTTCTGGGA
GGGCGAGGAAGCCATTCTGGCGGGCATGAAGGAGTTCGCGGACGGCTGGTTCGAGCGTCGGCGGATTGGAACCCACGCCG
CACTGGAAACCGCGCGTCGGATGAGCGAAGCGGCAACGCCACTCGATGCGGTGCGCGAGTATCAGGACTGGCTGAGCGGC
GCGGCCGCACGGGTGCTCGAAGACGGCATCGCCTGTCAGCAACAATTCCTCAAAGCCAATGCCCGGCTGGCGCCGCATCT
GCCGCACACCTCAAAGGCCGAGGCGCCGCCTCCGGAAGCGGATGATCGCCTGAGCGCCTGA

Upstream 100 bases:

>100_bases
TCGTTCATCGGGTTGTGATCACTCCCGTGCCGCAATCGGCGTTTATTGCTCCAAGTGCGACTTAGCGATTTGATTTCACC
GGTCACCACGGAGATTTCAG

Downstream 100 bases:

>100_bases
CTGCCGCGCATCGTAAATAACAGCGCCCATGACCAGTCATGCGCGCGTCGGCTTTTTATGGTCGGAGCGTTGCTGTGGCT
CGTCGCCCGACTCCGCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSDPVTLFPNLLPAARTYGPVGVKFWEGEEAILAGMKEFADGWFERRRIGTHAALETARRMSEAATPLDAVREYQDWLSG
AAARVLEDGIACQQQFLKANARLAPHLPHTSKAEAPPPEADDRLSA

Sequences:

>Translated_126_residues
MSDPVTLFPNLLPAARTYGPVGVKFWEGEEAILAGMKEFADGWFERRRIGTHAALETARRMSEAATPLDAVREYQDWLSG
AAARVLEDGIACQQQFLKANARLAPHLPHTSKAEAPPPEADDRLSA
>Mature_125_residues
SDPVTLFPNLLPAARTYGPVGVKFWEGEEAILAGMKEFADGWFERRRIGTHAALETARRMSEAATPLDAVREYQDWLSGA
AARVLEDGIACQQQFLKANARLAPHLPHTSKAEAPPPEADDRLSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13815; Mature: 13683

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPVTLFPNLLPAARTYGPVGVKFWEGEEAILAGMKEFADGWFERRRIGTHAALETARR
CCCCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSEAATPLDAVREYQDWLSGAAARVLEDGIACQQQFLKANARLAPHLPHTSKAEAPPPEA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DDRLSA
CCCCCC
>Mature Secondary Structure 
SDPVTLFPNLLPAARTYGPVGVKFWEGEEAILAGMKEFADGWFERRRIGTHAALETARR
CCCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSEAATPLDAVREYQDWLSGAAARVLEDGIACQQQFLKANARLAPHLPHTSKAEAPPPEA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DDRLSA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA