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The map label for this gene is 86748748

Identifier: 86748748

GI number: 86748748

Start: 1829803

End: 1831314

Strand: Reverse

Name: 86748748

Synonym: RPB_1624

Alternate gene names: NA

Gene position: 1831314-1829803 (Counterclockwise)

Preceding gene: 86748750

Following gene: 86748740

Centisome position: 34.35

GC content: 71.1

Gene sequence:

>1512_bases
GTGACGCGCAGCGATTTGCGCAATGAGTCCCTGATGGCCGAAGAAGCATTCGCACTGTCGCCGATCTCCGCACGCCCGGC
GATGCCGAACGACGCGGACTACGATGCGATCCGCGAAGCCTTCATGGAAACCTCGCGGGGACGCTGGTTTCTCAGCGAAT
ACGCCAAGCGCAACCGCAACGCCGACACCCGCATGGTGCTGGATGCGGTGGCGCGGATCGAGCAGAATCTCGCCGCGCAG
AAGCAGGCCGGCGGCCCGTCCTTCGGCGAATCACTCGTCGCGATCCGGGCGATCGTCGGCGAGGCGCGCGCCGGCGTCGC
CCGGGCGATCGCCGGACTGGAGAACGAGGCGGTGCTGGCAGCGGCGCGTGACGGCGCGCGCATCATCCGCGAGGTGTCGT
GGACGCTGCGCGAATGCGGCGCCGATATCCGGATCTGCAATCTGATCGACACCCAGGTGACGGCGATCGACGCCGGCCAC
CGGCTGGTCGAGGACATCGACACAGCGGCGGTGACGGCGGCGTTCGACGGCCTGCTCGACCGCCTGCACGACCTCGCAGG
GGTCGCGCGCGAGGCCCGTGACGATGCTCGGCCCGCCGACCGGGACGAGATGGTGGCCCCCAGCGCCGACGGCGACATGG
CGGAAGCCGCAGCGCCGCCACAGACCGAAGCGGTCGTGACCGAGCCGGCGTTGGAGACCCATCCGCAGCTGGTCGCGACC
GAGCCGGCCGCGCCGGAGGCGGAGGCCGAGGCCGGCGTGACGATCGTGGCTGCGGCGGAGACCGACGGAGTCGAATTCGT
AGAGCCATGGGACCAGCCGCCGGCGGACGACGTCGAGGCGGCGGTTGCGGTCGATCAGACTCCGGACGATCAGGCCTCGT
TTCATCAGTCCCCGGTCGCTGTGCCCCCCGTCGCCCTTAATTCGACCGATCAGCCTCAGGCTGCCGAGCCGGCCGATGAA
CCGGCCGCCGATGTCGACGCGATGCTGGATCTGGTCGCGATGGAGATGTCGGCGCCGCAGCCGCCCGAGCCCGGCGAACT
CGAAGCCGCGATCGCCGCCGCGCAGGCCGAGGCCGAACAGACGGTGGACGCCAGCCCGGCAGCCGGCGAACACTCCGAGC
TCGAGACGATCGCTGCCGCGGTGGCGCTGCCGCACGCGGCCCCCGACGCCGATCTGCCCGCGGCAGCCGAAGCGCCGTCG
AGCGACACCGCCCCGATCGAAGCCCCGTCGATCGACCTGTCGAGCCTCGAGATCGGCGAGCGCGGCGAGCTCCTCGATAC
GCCGCGGCAGATGACAGAAGCGATGATGGCGGCGCCCGCAACGACTCACGCGGTCGCGCCCGCGCCAATGATGGCTGCGA
GCGCCGGGCCCGCGGCTGCAGCGGCATCGCCGTCGCTCGGCGCTGCTCTGCTTGCGAGCGGCGTTGTCGGCCAGCCTGTG
CAGTCCCACAGCGATGCGCTGGCGCCGCTGCGACGGATGAGCCAGGCCGAGAAGATCGCCTTCTTCTCCTGA

Upstream 100 bases:

>100_bases
CGATCGCGAATCGCTTCGGAGCCCTTGTTCTGGTGGGGATTTGTGATTCGGGAGACATCAATTCAATTGCGATTCAGCAC
GGTTCGTGGTGATCGTTATC

Downstream 100 bases:

>100_bases
GCCGCGCCTCGCCGGGGGTGGGATGACGCTTTCGAATCGTTTCCCGCTGCGAACGAGACTCGCGCGCCTCGTCGACTGAT
TGAAGCAATGCGGCCAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MTRSDLRNESLMAEEAFALSPISARPAMPNDADYDAIREAFMETSRGRWFLSEYAKRNRNADTRMVLDAVARIEQNLAAQ
KQAGGPSFGESLVAIRAIVGEARAGVARAIAGLENEAVLAAARDGARIIREVSWTLRECGADIRICNLIDTQVTAIDAGH
RLVEDIDTAAVTAAFDGLLDRLHDLAGVAREARDDARPADRDEMVAPSADGDMAEAAAPPQTEAVVTEPALETHPQLVAT
EPAAPEAEAEAGVTIVAAAETDGVEFVEPWDQPPADDVEAAVAVDQTPDDQASFHQSPVAVPPVALNSTDQPQAAEPADE
PAADVDAMLDLVAMEMSAPQPPEPGELEAAIAAAQAEAEQTVDASPAAGEHSELETIAAAVALPHAAPDADLPAAAEAPS
SDTAPIEAPSIDLSSLEIGERGELLDTPRQMTEAMMAAPATTHAVAPAPMMAASAGPAAAAASPSLGAALLASGVVGQPV
QSHSDALAPLRRMSQAEKIAFFS

Sequences:

>Translated_503_residues
MTRSDLRNESLMAEEAFALSPISARPAMPNDADYDAIREAFMETSRGRWFLSEYAKRNRNADTRMVLDAVARIEQNLAAQ
KQAGGPSFGESLVAIRAIVGEARAGVARAIAGLENEAVLAAARDGARIIREVSWTLRECGADIRICNLIDTQVTAIDAGH
RLVEDIDTAAVTAAFDGLLDRLHDLAGVAREARDDARPADRDEMVAPSADGDMAEAAAPPQTEAVVTEPALETHPQLVAT
EPAAPEAEAEAGVTIVAAAETDGVEFVEPWDQPPADDVEAAVAVDQTPDDQASFHQSPVAVPPVALNSTDQPQAAEPADE
PAADVDAMLDLVAMEMSAPQPPEPGELEAAIAAAQAEAEQTVDASPAAGEHSELETIAAAVALPHAAPDADLPAAAEAPS
SDTAPIEAPSIDLSSLEIGERGELLDTPRQMTEAMMAAPATTHAVAPAPMMAASAGPAAAAASPSLGAALLASGVVGQPV
QSHSDALAPLRRMSQAEKIAFFS
>Mature_502_residues
TRSDLRNESLMAEEAFALSPISARPAMPNDADYDAIREAFMETSRGRWFLSEYAKRNRNADTRMVLDAVARIEQNLAAQK
QAGGPSFGESLVAIRAIVGEARAGVARAIAGLENEAVLAAARDGARIIREVSWTLRECGADIRICNLIDTQVTAIDAGHR
LVEDIDTAAVTAAFDGLLDRLHDLAGVAREARDDARPADRDEMVAPSADGDMAEAAAPPQTEAVVTEPALETHPQLVATE
PAAPEAEAEAGVTIVAAAETDGVEFVEPWDQPPADDVEAAVAVDQTPDDQASFHQSPVAVPPVALNSTDQPQAAEPADEP
AADVDAMLDLVAMEMSAPQPPEPGELEAAIAAAQAEAEQTVDASPAAGEHSELETIAAAVALPHAAPDADLPAAAEAPSS
DTAPIEAPSIDLSSLEIGERGELLDTPRQMTEAMMAAPATTHAVAPAPMMAASAGPAAAAASPSLGAALLASGVVGQPVQ
SHSDALAPLRRMSQAEKIAFFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52050; Mature: 51919

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: PS00372 PTS_EIIA_TYPE_2_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSDLRNESLMAEEAFALSPISARPAMPNDADYDAIREAFMETSRGRWFLSEYAKRNRN
CCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC
ADTRMVLDAVARIEQNLAAQKQAGGPSFGESLVAIRAIVGEARAGVARAIAGLENEAVLA
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
AARDGARIIREVSWTLRECGADIRICNLIDTQVTAIDAGHRLVEDIDTAAVTAAFDGLLD
ECCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLHDLAGVAREARDDARPADRDEMVAPSADGDMAEAAAPPQTEAVVTEPALETHPQLVAT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCHHCCCCEEEE
EPAAPEAEAEAGVTIVAAAETDGVEFVEPWDQPPADDVEAAVAVDQTPDDQASFHQSPVA
CCCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHEEEECCCCCHHHHHCCCCCC
VPPVALNSTDQPQAAEPADEPAADVDAMLDLVAMEMSAPQPPEPGELEAAIAAAQAEAEQ
CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
TVDASPAAGEHSELETIAAAVALPHAAPDADLPAAAEAPSSDTAPIEAPSIDLSSLEIGE
HCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC
RGELLDTPRQMTEAMMAAPATTHAVAPAPMMAASAGPAAAAASPSLGAALLASGVVGQPV
CCCHHCCHHHHHHHHHHCCCHHHCCCCCCHHHCCCCCCHHCCCCCHHHHHHHCCCCCCCH
QSHSDALAPLRRMSQAEKIAFFS
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRSDLRNESLMAEEAFALSPISARPAMPNDADYDAIREAFMETSRGRWFLSEYAKRNRN
CHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC
ADTRMVLDAVARIEQNLAAQKQAGGPSFGESLVAIRAIVGEARAGVARAIAGLENEAVLA
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
AARDGARIIREVSWTLRECGADIRICNLIDTQVTAIDAGHRLVEDIDTAAVTAAFDGLLD
ECCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLHDLAGVAREARDDARPADRDEMVAPSADGDMAEAAAPPQTEAVVTEPALETHPQLVAT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCHHCCCCEEEE
EPAAPEAEAEAGVTIVAAAETDGVEFVEPWDQPPADDVEAAVAVDQTPDDQASFHQSPVA
CCCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHEEEECCCCCHHHHHCCCCCC
VPPVALNSTDQPQAAEPADEPAADVDAMLDLVAMEMSAPQPPEPGELEAAIAAAQAEAEQ
CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
TVDASPAAGEHSELETIAAAVALPHAAPDADLPAAAEAPSSDTAPIEAPSIDLSSLEIGE
HCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC
RGELLDTPRQMTEAMMAAPATTHAVAPAPMMAASAGPAAAAASPSLGAALLASGVVGQPV
CCCHHCCHHHHHHHHHHCCCHHHCCCCCCHHHCCCCCCHHCCCCCHHHHHHHCCCCCCCH
QSHSDALAPLRRMSQAEKIAFFS
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA