Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86748281

Identifier: 86748281

GI number: 86748281

Start: 1328036

End: 1328176

Strand: Reverse

Name: 86748281

Synonym: RPB_1156

Alternate gene names: NA

Gene position: 1328176-1328036 (Counterclockwise)

Preceding gene: 86748289

Following gene: 86748280

Centisome position: 24.91

GC content: 62.41

Gene sequence:

>141_bases
ATGGGTTTGGGACTGGAACGGAAGCTGCAGCGCTGGCTCGACGAGCACAGCCTGCCGCAGATCATCATCGCGGTGCTCGG
CGTGATCATTGTGCTGGCGCTGATCCTGGTGGTCGGCGGCTATTGGCTGGTGACGCCTTGA

Upstream 100 bases:

>100_bases
GCCGCACGCGAATTGGCGCGCGCCGGCCGGCAAAGTGCTAGATCAGCGGCCCGGCCGCAGAATCCCTCGCCGGCCGAGCC
GCAGGACAAGTGAGCGATCG

Downstream 100 bases:

>100_bases
CGGCAGACGCGGCGACGGCGCTGCGGATTCACGGCGGCCGGATCGACATCGCGGCGACATGCTATCCCGACGCGCCGCGG
CCCTGGATCGATCTGTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 45

Protein sequence:

>46_residues
MGLGLERKLQRWLDEHSLPQIIIAVLGVIIVLALILVVGGYWLVTP

Sequences:

>Translated_46_residues
MGLGLERKLQRWLDEHSLPQIIIAVLGVIIVLALILVVGGYWLVTP
>Mature_45_residues
GLGLERKLQRWLDEHSLPQIIIAVLGVIIVLALILVVGGYWLVTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5107; Mature: 4976

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLGLERKLQRWLDEHSLPQIIIAVLGVIIVLALILVVGGYWLVTP
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
GLGLERKLQRWLDEHSLPQIIIAVLGVIIVLALILVVGGYWLVTP
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA