Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is metA [H]
Identifier: 86748127
GI number: 86748127
Start: 1147693
End: 1148694
Strand: Direct
Name: metA [H]
Synonym: RPB_1002
Alternate gene names: 86748127
Gene position: 1147693-1148694 (Clockwise)
Preceding gene: 86748126
Following gene: 86748128
Centisome position: 21.53
GC content: 70.26
Gene sequence:
>1002_bases ATGTCCCTGCTGTTCGACAACGCCGATCCGATCGACAGCCCGATGCTGGTCCCGAGCGGCCGGCGTGACGGGCGCAGACG CCGCGACGCCGCCGGGCGCGACGCGGCGATCGAGATCGGGCTCGTCAACAACATGGGCGACGCCGCGCTGCGGGCCACCG AGCGGCAGTTCGCGCGCCTGCTCGAGGCCGGCGCCGGCGATCGCCCGGTGCGGCTGCATTGCTTCGCGCTGCCCTCGGTG CAGCGTTCGCCGGCGGCGCGTCATCGCATCGACAGCCTCTATGCCGGCATCTCCGAGCTGCGCACCATCAGGCTCGACGG GCTGATCGTGACCGGGGCCGAACCGCGCGCCGCCACGTTGCGCGAGGAGCCGTATTGGGACGAGATGCGCGCGCTGGTCG ACTGGGCCGAGGCCAACACCACTTCGACGATCTGGTCGTGCCTCGCCGCGCATGCGGCAGTGCTGCATCTCGACGGCATC GAGCGGGAACGCCTGCCGAAGAAATGTTCCGGCATCTATGCCGGCGAGCGATTGCAGGACGATCCGCTGCTGATCGACCT GCCGGCTCAGATGCAGGTGCCGCATTCGCGGCTGAACGACCTGCCGGCGGACCGGCTGGCCGCGAGCGGCTACGAGGTGC TGACGCAGGCGCGCGACGCCGGCGTCGACGTCTTCATGCGCCGCGGGCGCAGCCGCTTCGTGTTCTTCCAGGGCCACCCC GAATACGACATCGGCTCGCTGCAGCGCGAGTATCTGCGCGACATCGGCCGTTTCCTCACCGGCGAGCGCGAATCCTATCC GGAGATTCCGGTCGATTATTTCGATGCCGCGACCGAGGCCGCGCTCGGCGCGTTCGGCGCGCAAGCCGAGGCCGAACCGG AGCCCGCGCTGATTTCCCGGCTGCCGCAATTGGCGCTGCGCGCCGGCGTCGCCGACGCCATCGAGGCCACGGCCACCACG CTGTTCCGCAACTGGCTCGACTCCCTCGCAGGCCGCTCATGA
Upstream 100 bases:
>100_bases AACACATCGCCGACATCATCGAAGATCTCGATCAGGCGCTGGCGCAGGCCGGTGGCCGGCGCACGCAACTGATCGCGGCG GAATAAAGCGGCGCGCCGGC
Downstream 100 bases:
>100_bases ACATCCGCCCCGCCGCGCTGCATCGCGAATCCGCCGCCGACAGCTTCAAGGCGGCGATGCGCCACCTCGCCGGTGGCGTC AGCATCGTCACCAGCGGGCA
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSLLFDNADPIDSPMLVPSGRRDGRRRRDAAGRDAAIEIGLVNNMGDAALRATERQFARLLEAGAGDRPVRLHCFALPSV QRSPAARHRIDSLYAGISELRTIRLDGLIVTGAEPRAATLREEPYWDEMRALVDWAEANTTSTIWSCLAAHAAVLHLDGI ERERLPKKCSGIYAGERLQDDPLLIDLPAQMQVPHSRLNDLPADRLAASGYEVLTQARDAGVDVFMRRGRSRFVFFQGHP EYDIGSLQREYLRDIGRFLTGERESYPEIPVDYFDAATEAALGAFGAQAEAEPEPALISRLPQLALRAGVADAIEATATT LFRNWLDSLAGRS
Sequences:
>Translated_333_residues MSLLFDNADPIDSPMLVPSGRRDGRRRRDAAGRDAAIEIGLVNNMGDAALRATERQFARLLEAGAGDRPVRLHCFALPSV QRSPAARHRIDSLYAGISELRTIRLDGLIVTGAEPRAATLREEPYWDEMRALVDWAEANTTSTIWSCLAAHAAVLHLDGI ERERLPKKCSGIYAGERLQDDPLLIDLPAQMQVPHSRLNDLPADRLAASGYEVLTQARDAGVDVFMRRGRSRFVFFQGHP EYDIGSLQREYLRDIGRFLTGERESYPEIPVDYFDAATEAALGAFGAQAEAEPEPALISRLPQLALRAGVADAIEATATT LFRNWLDSLAGRS >Mature_332_residues SLLFDNADPIDSPMLVPSGRRDGRRRRDAAGRDAAIEIGLVNNMGDAALRATERQFARLLEAGAGDRPVRLHCFALPSVQ RSPAARHRIDSLYAGISELRTIRLDGLIVTGAEPRAATLREEPYWDEMRALVDWAEANTTSTIWSCLAAHAAVLHLDGIE RERLPKKCSGIYAGERLQDDPLLIDLPAQMQVPHSRLNDLPADRLAASGYEVLTQARDAGVDVFMRRGRSRFVFFQGHPE YDIGSLQREYLRDIGRFLTGERESYPEIPVDYFDAATEAALGAFGAQAEAEPEPALISRLPQLALRAGVADAIEATATTL FRNWLDSLAGRS
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family [H]
Homologues:
Organism=Escherichia coli, GI1790443, Length=224, Percent_Identity=29.4642857142857, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005697 - ProDom: PD037892 [H]
Pfam domain/function: PF04204 HTS [H]
EC number: =2.3.1.46 [H]
Molecular weight: Translated: 36733; Mature: 36602
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLFDNADPIDSPMLVPSGRRDGRRRRDAAGRDAAIEIGLVNNMGDAALRATERQFARL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH LEAGAGDRPVRLHCFALPSVQRSPAARHRIDSLYAGISELRTIRLDGLIVTGAEPRAATL HHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEECCEEEECCCCCHHHC REEPYWDEMRALVDWAEANTTSTIWSCLAAHAAVLHLDGIERERLPKKCSGIYAGERLQD CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCHHHHCCCCCCCCCCC DPLLIDLPAQMQVPHSRLNDLPADRLAASGYEVLTQARDAGVDVFMRRGRSRFVFFQGHP CCEEEECCCHHCCCHHHHHCCCHHHHHHCHHHHHHHHHHCCHHHHHHCCCCEEEEEECCC EYDIGSLQREYLRDIGRFLTGERESYPEIPVDYFDAATEAALGAFGAQAEAEPEPALISR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LPQLALRAGVADAIEATATTLFRNWLDSLAGRS HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLLFDNADPIDSPMLVPSGRRDGRRRRDAAGRDAAIEIGLVNNMGDAALRATERQFARL CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH LEAGAGDRPVRLHCFALPSVQRSPAARHRIDSLYAGISELRTIRLDGLIVTGAEPRAATL HHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEECCEEEECCCCCHHHC REEPYWDEMRALVDWAEANTTSTIWSCLAAHAAVLHLDGIERERLPKKCSGIYAGERLQD CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCHHHHCCCCCCCCCCC DPLLIDLPAQMQVPHSRLNDLPADRLAASGYEVLTQARDAGVDVFMRRGRSRFVFFQGHP CCEEEECCCHHCCCHHHHHCCCHHHHHHCHHHHHHHHHHCCHHHHHHCCCCEEEEEECCC EYDIGSLQREYLRDIGRFLTGERESYPEIPVDYFDAATEAALGAFGAQAEAEPEPALISR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LPQLALRAGVADAIEATATTLFRNWLDSLAGRS HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA