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The map label for this gene is yncC [H]

Identifier: 86748041

GI number: 86748041

Start: 1055753

End: 1057234

Strand: Direct

Name: yncC [H]

Synonym: RPB_0915

Alternate gene names: 86748041

Gene position: 1055753-1057234 (Clockwise)

Preceding gene: 86748040

Following gene: 86748042

Centisome position: 19.8

GC content: 65.38

Gene sequence:

>1482_bases
ATGGCCGTTTCCACAAGCGCCGCTTGGACGCAACCACCACCGGCCCCGCGCGTCGGCGGTTGCATCATTGAAACCGACAT
TCCGGCGCGGCTGGACGGCCTGCTGTGGAGCGGCTTTCATACCCGCGTGGTGGTCGCGCTCGGCGTCACCTGGATTCTGG
ACGGTCTCGAAGTGACGCTCGCCGGCACGCTCTCGGGCGCGCTGAAGCAGCAGCTTCAGTTCTCCAACCTCGATGTCGGC
GTCGCCAACAGCGCCTATCTCGCCGGCGCGGTGCTCGGCGCGCTCGGCTTCGGCTGGCTGACCGACCGGATCGGCCGCAA
GAAACTGTTCTTCATCACGCTGGCGCTGTATCTCGCCGCGACCGCGGCGACGGCGCTGTCCTGGAATGTCTGGAGCTACG
CGCTGTTTCGATTTCTCACCGGAGCCGGCATCGGCGGCGAATACACCGCCATCAACTCGACGATCCAGGAGCTGATGCCG
GCGCGCTATCGCGGCTGGACCGATCTGGTGATCAACGGCAGCTTCTGGCTCGGCGCGGCGCTCGGTGCGGTCTGCGCCAT
CGTGCTGCTCGACCCGGCGGTGATCGATCCCGAATATGGCTGGCGGCTCGCTTACTTCACCGGCGCCGTGCTCGGCATCG
TGGTGTTCGTGATGCGGTTGTGGATTCCGGAAAGCCCGCGCTGGCTCATGATTCACGGCCGCCCGGAACAGGCCGAGGCG
ATCGTCGCCGAGATCGAGCGGACGGCGCGGATCGCAACCGAGCCGGAGCATCGCATCAAGTCGAAGATCCGCCTGCAGAT
GCGCAGCCACACGCCGCTGCGCGAGGTCGCGCACACGCTGCTCACCACATACAGGCAACGTTCGTTCGTCGGACTGACGC
TGATGGCGGCGCAGGCGTTCTTCTACAATGCGATCTTCTTCACCTACGCGCTGATCCTGACCGACTTCTTCGGCATTCCG
TCCAGCCATATCGGCTGGTACATCCTGCCGTTCGCCGCCGGCAATTTTCTCGGGCCGTTGCTGCTCGGTCGATTGTTCGA
TACGCTCGGCCGCCGCAAGATGATCGCGTTCACCTACGGCATCTCGGGACTGCTGCTCGCCGGCTCCGGCTATCTGTTCT
CGATCGGTGCGCTGACCGCGCAGAGCCAGACGATCGCCTGGATGGTGATCTTCTTCTTCGCATCGCCGGCCGCGAGCGCG
GCCTATCTCACGGTCAGCGAGACCTTCCCGCTCGAGGTTCGTGCGCTGGCGATCGCGATCTTCTACGCGATCGGCACAGG
AATCGGCGGCGTCGCCGGCCCGGCGCTGTTCGGCGCGCTGATCGATACCGGATCGCGCACCACCGTGTTCGCCGGCTATC
TGCTCGGCGCGGCTCTGATGATCGTCGCCGCAATGGTCGGTTGGCGTTATGGTGTGGCGGCCGAACGCAGGTCGCTGGAA
CAAGTGGCGCGGCCGCTGGCCGCCATAGAGGAAAACCGATGA

Upstream 100 bases:

>100_bases
ACCGTTGCGGCCCCGTTCCGTTAGCCTGCGACCGGTCCGTCCTGGGTGACGGATCGCCACGTTCGGCGCTTGCGGCGTGG
CTCAACGCCGGAGCGAGGTA

Downstream 100 bases:

>100_bases
CTTCGAATCTCGCCGACGACGCCTCGCGGCCGACTACCAATTCCGTACCGGTGCCGAGCGCGCTGGTGCCGCATCTCGAT
CAGTGCGCGCTGCTGCTCGA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MAVSTSAAWTQPPPAPRVGGCIIETDIPARLDGLLWSGFHTRVVVALGVTWILDGLEVTLAGTLSGALKQQLQFSNLDVG
VANSAYLAGAVLGALGFGWLTDRIGRKKLFFITLALYLAATAATALSWNVWSYALFRFLTGAGIGGEYTAINSTIQELMP
ARYRGWTDLVINGSFWLGAALGAVCAIVLLDPAVIDPEYGWRLAYFTGAVLGIVVFVMRLWIPESPRWLMIHGRPEQAEA
IVAEIERTARIATEPEHRIKSKIRLQMRSHTPLREVAHTLLTTYRQRSFVGLTLMAAQAFFYNAIFFTYALILTDFFGIP
SSHIGWYILPFAAGNFLGPLLLGRLFDTLGRRKMIAFTYGISGLLLAGSGYLFSIGALTAQSQTIAWMVIFFFASPAASA
AYLTVSETFPLEVRALAIAIFYAIGTGIGGVAGPALFGALIDTGSRTTVFAGYLLGAALMIVAAMVGWRYGVAAERRSLE
QVARPLAAIEENR

Sequences:

>Translated_493_residues
MAVSTSAAWTQPPPAPRVGGCIIETDIPARLDGLLWSGFHTRVVVALGVTWILDGLEVTLAGTLSGALKQQLQFSNLDVG
VANSAYLAGAVLGALGFGWLTDRIGRKKLFFITLALYLAATAATALSWNVWSYALFRFLTGAGIGGEYTAINSTIQELMP
ARYRGWTDLVINGSFWLGAALGAVCAIVLLDPAVIDPEYGWRLAYFTGAVLGIVVFVMRLWIPESPRWLMIHGRPEQAEA
IVAEIERTARIATEPEHRIKSKIRLQMRSHTPLREVAHTLLTTYRQRSFVGLTLMAAQAFFYNAIFFTYALILTDFFGIP
SSHIGWYILPFAAGNFLGPLLLGRLFDTLGRRKMIAFTYGISGLLLAGSGYLFSIGALTAQSQTIAWMVIFFFASPAASA
AYLTVSETFPLEVRALAIAIFYAIGTGIGGVAGPALFGALIDTGSRTTVFAGYLLGAALMIVAAMVGWRYGVAAERRSLE
QVARPLAAIEENR
>Mature_492_residues
AVSTSAAWTQPPPAPRVGGCIIETDIPARLDGLLWSGFHTRVVVALGVTWILDGLEVTLAGTLSGALKQQLQFSNLDVGV
ANSAYLAGAVLGALGFGWLTDRIGRKKLFFITLALYLAATAATALSWNVWSYALFRFLTGAGIGGEYTAINSTIQELMPA
RYRGWTDLVINGSFWLGAALGAVCAIVLLDPAVIDPEYGWRLAYFTGAVLGIVVFVMRLWIPESPRWLMIHGRPEQAEAI
VAEIERTARIATEPEHRIKSKIRLQMRSHTPLREVAHTLLTTYRQRSFVGLTLMAAQAFFYNAIFFTYALILTDFFGIPS
SHIGWYILPFAAGNFLGPLLLGRLFDTLGRRKMIAFTYGISGLLLAGSGYLFSIGALTAQSQTIAWMVIFFFASPAASAA
YLTVSETFPLEVRALAIAIFYAIGTGIGGVAGPALFGALIDTGSRTTVFAGYLLGAALMIVAAMVGWRYGVAAERRSLEQ
VARPLAAIEENR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI213021148, Length=481, Percent_Identity=23.0769230769231, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI166197673, Length=218, Percent_Identity=28.4403669724771, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI8923870, Length=369, Percent_Identity=26.0162601626016, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI24308167, Length=431, Percent_Identity=25.5220417633411, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI296080721, Length=255, Percent_Identity=25.8823529411765, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI296080734, Length=249, Percent_Identity=25.7028112449799, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI296080719, Length=243, Percent_Identity=25.1028806584362, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI24497499, Length=243, Percent_Identity=25.1028806584362, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1786229, Length=403, Percent_Identity=24.0694789081886, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI87082159, Length=220, Percent_Identity=30.4545454545455, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788068, Length=480, Percent_Identity=25, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788074, Length=478, Percent_Identity=25.5230125523013, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1789312, Length=444, Percent_Identity=23.8738738738739, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789207, Length=467, Percent_Identity=25.0535331905782, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1790550, Length=413, Percent_Identity=24.455205811138, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI32564663, Length=419, Percent_Identity=25.0596658711217, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17565978, Length=304, Percent_Identity=26.9736842105263, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17565976, Length=300, Percent_Identity=26, Blast_Score=72, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6320766, Length=376, Percent_Identity=24.468085106383, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6324400, Length=372, Percent_Identity=24.7311827956989, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322618, Length=371, Percent_Identity=24.5283018867925, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6319956, Length=371, Percent_Identity=24.5283018867925, Blast_Score=71, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6324011, Length=374, Percent_Identity=23.2620320855615, Blast_Score=70, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6323653, Length=396, Percent_Identity=24.7474747474747, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6321886, Length=370, Percent_Identity=23.5135135135135, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6319718, Length=305, Percent_Identity=25.5737704918033, Blast_Score=64, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320552, Length=370, Percent_Identity=23.7837837837838, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI19922616, Length=364, Percent_Identity=24.4505494505494, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24649618, Length=175, Percent_Identity=26.8571428571429, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24640198, Length=298, Percent_Identity=23.8255033557047, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24640196, Length=298, Percent_Identity=23.8255033557047, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24640200, Length=298, Percent_Identity=23.8255033557047, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221330907, Length=191, Percent_Identity=28.7958115183246, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI19922874, Length=334, Percent_Identity=23.3532934131737, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585484, Length=356, Percent_Identity=24.438202247191, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI20129657, Length=382, Percent_Identity=24.6073298429319, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI62484254, Length=165, Percent_Identity=29.6969696969697, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828
- InterPro:   IPR003663
- InterPro:   IPR005829 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 53338; Mature: 53207

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSTSAAWTQPPPAPRVGGCIIETDIPARLDGLLWSGFHTRVVVALGVTWILDGLEVTL
CCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEE
AGTLSGALKQQLQFSNLDVGVANSAYLAGAVLGALGFGWLTDRIGRKKLFFITLALYLAA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TAATALSWNVWSYALFRFLTGAGIGGEYTAINSTIQELMPARYRGWTDLVINGSFWLGAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHH
LGAVCAIVLLDPAVIDPEYGWRLAYFTGAVLGIVVFVMRLWIPESPRWLMIHGRPEQAEA
HHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
IVAEIERTARIATEPEHRIKSKIRLQMRSHTPLREVAHTLLTTYRQRSFVGLTLMAAQAF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYNAIFFTYALILTDFFGIPSSHIGWYILPFAAGNFLGPLLLGRLFDTLGRRKMIAFTYG
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHCCCEEEEEEEC
ISGLLLAGSGYLFSIGALTAQSQTIAWMVIFFFASPAASAAYLTVSETFPLEVRALAIAI
CCEEEEECCCCEEEEEHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHH
FYAIGTGIGGVAGPALFGALIDTGSRTTVFAGYLLGAALMIVAAMVGWRYGVAAERRSLE
HHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
QVARPLAAIEENR
HHHHHHHHHCCCC
>Mature Secondary Structure 
AVSTSAAWTQPPPAPRVGGCIIETDIPARLDGLLWSGFHTRVVVALGVTWILDGLEVTL
CCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEE
AGTLSGALKQQLQFSNLDVGVANSAYLAGAVLGALGFGWLTDRIGRKKLFFITLALYLAA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TAATALSWNVWSYALFRFLTGAGIGGEYTAINSTIQELMPARYRGWTDLVINGSFWLGAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHH
LGAVCAIVLLDPAVIDPEYGWRLAYFTGAVLGIVVFVMRLWIPESPRWLMIHGRPEQAEA
HHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
IVAEIERTARIATEPEHRIKSKIRLQMRSHTPLREVAHTLLTTYRQRSFVGLTLMAAQAF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYNAIFFTYALILTDFFGIPSSHIGWYILPFAAGNFLGPLLLGRLFDTLGRRKMIAFTYG
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHCCCEEEEEEEC
ISGLLLAGSGYLFSIGALTAQSQTIAWMVIFFFASPAASAAYLTVSETFPLEVRALAIAI
CCEEEEECCCCEEEEEHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHH
FYAIGTGIGGVAGPALFGALIDTGSRTTVFAGYLLGAALMIVAAMVGWRYGVAAERRSLE
HHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
QVARPLAAIEENR
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]