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The map label for this gene is fdhD [H]

Identifier: 86747849

GI number: 86747849

Start: 811356

End: 812189

Strand: Reverse

Name: fdhD [H]

Synonym: RPB_0723

Alternate gene names: 86747849

Gene position: 812189-811356 (Counterclockwise)

Preceding gene: 86747850

Following gene: 86747848

Centisome position: 15.23

GC content: 71.7

Gene sequence:

>834_bases
ATGACGCTGCGCCCGACCGCCCACAGCCAGCCGACCCGGACCTGGCGCAATGGCCGGATGCAGGACGGCACCCGCGCCGT
TCCGGAGGAGACGCCGGTCGCGATCAGCTACAATGGCGGCACCCACGCGGTGATGATGGCGACGCCGGCCGACCTCGAGG
ACTTCGCGATCGGCTTCAGCCTCGGCGAAGGCGTGATCGCAAACCCATCGCAGATCGACAGCTTGGAGATCGTGCCGCTC
GACGACGGCGTCGAATTGCGGATGTGGATCGGCGGCGCCGAGGGCGAGCGGCTGCAGCAACGCCGCCGCCATATCGCAGG
CCCCACCGGCTGCGGCCTGTGCGGCGTCGATTCGATCGCCGAAGCGCTACGCCCGGCGGCGATCGTGCATGCCGGCGGCC
GGTTCTCGCCGCAGCAGATCATCGCCGCGATCGATGCGCTGCCGCCGCTGCAAGCGCTCAATATCGAAACCCGCGCCGTC
CACGGCGCGGCGTTCTGGACGCCGGCGCGCGGCGTCGTCGCCTTGCGCGAGGACGTCGGCCGCCACAACGCGCTCGACAA
GCTCGCCGGCGCGCTGGCGCGGCAGCAGATCGTCGCCCGGGACGGCATCGTGCTGCTCACCAGCCGCGTCTCGGTCGAAA
TGGTGCAGAAGACCGCCGCGCTCGGCGCGCCTTTGCTGGTCGCCGTCTCCGCACCGACCGCGCTGGCGGTGCGGATGGCG
AACGCCGCCGGCATCACGCTGGCCGCGATCGCGCGCGCCGACGGCTTCGAAGTGTTCACCCATCCCGGCCGGATCAGCAG
CGGGACGAGCGAGGGAGCCGCCGATGTCGCCTGA

Upstream 100 bases:

>100_bases
TGCAGGTGACGCCGTCCAATGGTCCATCGGAATGGCAGCGCGACTATGCCCAGCAGGCGGCCGCCGCTCGCCGGATCGCG
ACGCCTGCAGAGGCCGCAGA

Downstream 100 bases:

>100_bases
GCGGCTGGTCCATATGGCCAATCAGATCGGCACCTTCTTTCGCAGCCAGGGTGCCGACAAGGCCGTGCCCGGTATCGCCG
AACATCTGAAGAAATTCTGG

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTLRPTAHSQPTRTWRNGRMQDGTRAVPEETPVAISYNGGTHAVMMATPADLEDFAIGFSLGEGVIANPSQIDSLEIVPL
DDGVELRMWIGGAEGERLQQRRRHIAGPTGCGLCGVDSIAEALRPAAIVHAGGRFSPQQIIAAIDALPPLQALNIETRAV
HGAAFWTPARGVVALREDVGRHNALDKLAGALARQQIVARDGIVLLTSRVSVEMVQKTAALGAPLLVAVSAPTALAVRMA
NAAGITLAAIARADGFEVFTHPGRISSGTSEGAADVA

Sequences:

>Translated_277_residues
MTLRPTAHSQPTRTWRNGRMQDGTRAVPEETPVAISYNGGTHAVMMATPADLEDFAIGFSLGEGVIANPSQIDSLEIVPL
DDGVELRMWIGGAEGERLQQRRRHIAGPTGCGLCGVDSIAEALRPAAIVHAGGRFSPQQIIAAIDALPPLQALNIETRAV
HGAAFWTPARGVVALREDVGRHNALDKLAGALARQQIVARDGIVLLTSRVSVEMVQKTAALGAPLLVAVSAPTALAVRMA
NAAGITLAAIARADGFEVFTHPGRISSGTSEGAADVA
>Mature_276_residues
TLRPTAHSQPTRTWRNGRMQDGTRAVPEETPVAISYNGGTHAVMMATPADLEDFAIGFSLGEGVIANPSQIDSLEIVPLD
DGVELRMWIGGAEGERLQQRRRHIAGPTGCGLCGVDSIAEALRPAAIVHAGGRFSPQQIIAAIDALPPLQALNIETRAVH
GAAFWTPARGVVALREDVGRHNALDKLAGALARQQIVARDGIVLLTSRVSVEMVQKTAALGAPLLVAVSAPTALAVRMAN
AAGITLAAIARADGFEVFTHPGRISSGTSEGAADVA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=254, Percent_Identity=40.5511811023622, Blast_Score=183, Evalue=9e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 28890; Mature: 28759

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRPTAHSQPTRTWRNGRMQDGTRAVPEETPVAISYNGGTHAVMMATPADLEDFAIGFS
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHEEEEE
LGEGVIANPSQIDSLEIVPLDDGVELRMWIGGAEGERLQQRRRHIAGPTGCGLCGVDSIA
CCCCEECCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
EALRPAAIVHAGGRFSPQQIIAAIDALPPLQALNIETRAVHGAAFWTPARGVVALREDVG
HHHCCEEEEECCCCCCHHHHHHHHHCCCCCHHCCCHHHEECCEEEECCCCCHHHHHHHHC
RHNALDKLAGALARQQIVARDGIVLLTSRVSVEMVQKTAALGAPLLVAVSAPTALAVRMA
CHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEC
NAAGITLAAIARADGFEVFTHPGRISSGTSEGAADVA
CCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLRPTAHSQPTRTWRNGRMQDGTRAVPEETPVAISYNGGTHAVMMATPADLEDFAIGFS
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHEEEEE
LGEGVIANPSQIDSLEIVPLDDGVELRMWIGGAEGERLQQRRRHIAGPTGCGLCGVDSIA
CCCCEECCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
EALRPAAIVHAGGRFSPQQIIAAIDALPPLQALNIETRAVHGAAFWTPARGVVALREDVG
HHHCCEEEEECCCCCCHHHHHHHHHCCCCCHHCCCHHHEECCEEEECCCCCHHHHHHHHC
RHNALDKLAGALARQQIVARDGIVLLTSRVSVEMVQKTAALGAPLLVAVSAPTALAVRMA
CHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEC
NAAGITLAAIARADGFEVFTHPGRISSGTSEGAADVA
CCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA