| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747848
Identifier: 86747848
GI number: 86747848
Start: 811148
End: 811366
Strand: Reverse
Name: 86747848
Synonym: RPB_0722
Alternate gene names: NA
Gene position: 811366-811148 (Counterclockwise)
Preceding gene: 86747849
Following gene: 86747847
Centisome position: 15.22
GC content: 67.58
Gene sequence:
>219_bases ATGTCGCCTGAGCGGCTGGTCCATATGGCCAATCAGATCGGCACCTTCTTTCGCAGCCAGGGTGCCGACAAGGCCGTGCC CGGTATCGCCGAACATCTGAAGAAATTCTGGGATCCGCGGATGCGCAAGGCGATCGTCGCGCATCTCGACGCCGGCGGCG AAGGCCTCGCGCCGGACGTCCGCGCGGCCGTGGAAGCGCTGCGGCCGCCGGCCGAGTAG
Upstream 100 bases:
>100_bases GCCGCCGGCATCACGCTGGCCGCGATCGCGCGCGCCGACGGCTTCGAAGTGTTCACCCATCCCGGCCGGATCAGCAGCGG GACGAGCGAGGGAGCCGCCG
Downstream 100 bases:
>100_bases TCGACGGCGGCGGCGATCCGCCCGCCCGACTTGGTCGGTCGATTCAGACGTCATCACCATGCCGACGCGACCGCCTTGCG GCACGGAACCTCCATGCGTT
Product: NAD-dependent formate dehydrogenase delta subunit
Products: CO2; NADH
Alternate protein names: Formate Dehydrogenase Delta Subunit; NAD-Dependent Formate Dehydrogenase Delta Subunit Protein; NAD-Dependent Formate Dehydrogenase; Formate Dehydrogenase Protein Delta Subunit; Formate Dehydrogenase Subunit Delta
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MSPERLVHMANQIGTFFRSQGADKAVPGIAEHLKKFWDPRMRKAIVAHLDAGGEGLAPDVRAAVEALRPPAE
Sequences:
>Translated_72_residues MSPERLVHMANQIGTFFRSQGADKAVPGIAEHLKKFWDPRMRKAIVAHLDAGGEGLAPDVRAAVEALRPPAE >Mature_71_residues SPERLVHMANQIGTFFRSQGADKAVPGIAEHLKKFWDPRMRKAIVAHLDAGGEGLAPDVRAAVEALRPPAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.2.1.2
Molecular weight: Translated: 7831; Mature: 7700
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPERLVHMANQIGTFFRSQGADKAVPGIAEHLKKFWDPRMRKAIVAHLDAGGEGLAPDV CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHH RAAVEALRPPAE HHHHHHHCCCCC >Mature Secondary Structure SPERLVHMANQIGTFFRSQGADKAVPGIAEHLKKFWDPRMRKAIVAHLDAGGEGLAPDV CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHH RAAVEALRPPAE HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formate; NAD+
Specific reaction: formate + NAD+ = CO2 + NADH
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA