| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747784
Identifier: 86747784
GI number: 86747784
Start: 742518
End: 743249
Strand: Reverse
Name: 86747784
Synonym: RPB_0658
Alternate gene names: NA
Gene position: 743249-742518 (Counterclockwise)
Preceding gene: 86747785
Following gene: 86747783
Centisome position: 13.94
GC content: 66.39
Gene sequence:
>732_bases ATGGAGGTGCGCTTCGCGGCAGCGGCGCGCCATAGCCGGCTGGTGCGGACGCTGCGGATCGCTGTGCCGCTGGTGGTGGC GCTGTCGATGGCCGCGATCATTGCGATCTCGCTGTTCAACCCGTTTCGCCTGCTGTCGAAACTACCGCTCGAGGTCGGCG ATCTGGTGGTGTCGGGAACCAAGATTACAATGGAATCGCCGCATATGGCCGGCTTCACCGACGACGGCCGGCCCTACGAG ATGTGGGCGCGGTCGGCGACGCAGGATCTGACCAGCCAGGACCATGTCGACCTGCATACGCTGCGGGCCAAGGTCGTCAG CGACGATCAATCCACCGTGCTGATCGAGGCGCGCGACGGCAAATTCAACACCAAGGCGCAACTCCTGAATCTGCAGAAGG ACGTCTATCTGCGCACCTCGACCGGCAGCGAGGCCTGGATGACCCAGGCCGACATCGACATGAGCAAGGGCACCGTGGCG TCCGACGAGCCGGTCGACGTCAAATGGCTCGGCGGCACGTTGCGCGGCCAGCGGCTGCGGATTACCGAGAAAGGCGACGT GATCCGATTCGAGGGCGGAGTGGTGATGAACCTGGACAACACCGCCATGCCGGCATCTGCCGAGGCGGCCGCGGCGCAGC CGACGCCGGCCTCGGCGCCGAAGGCCGATCCGGCGGCGAAAGCCAAACCATCGCCGGCCACCCCGCGCCAGCGCGACGCG AATCGCCCATGA
Upstream 100 bases:
>100_bases AGTGAGACAGCAGGGCTCGAACCCCGGCCCATGAGGCCGGGCTCGGCACCAGGCGGGAGCAGCGGTGGCTTCGGTTCAGG CGGCATCCTATCAGGCCGGC
Downstream 100 bases:
>100_bases CCGCTGCTGGCTTCCAGCTCTGCCGCATCGTCGCGATCTGCGGCGCAGCCTTCCTCGCCGGCGCCACCTGTGGCGGAGCC TGGGCGCAAAGCGCGGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MEVRFAAAARHSRLVRTLRIAVPLVVALSMAAIIAISLFNPFRLLSKLPLEVGDLVVSGTKITMESPHMAGFTDDGRPYE MWARSATQDLTSQDHVDLHTLRAKVVSDDQSTVLIEARDGKFNTKAQLLNLQKDVYLRTSTGSEAWMTQADIDMSKGTVA SDEPVDVKWLGGTLRGQRLRITEKGDVIRFEGGVVMNLDNTAMPASAEAAAAQPTPASAPKADPAAKAKPSPATPRQRDA NRP
Sequences:
>Translated_243_residues MEVRFAAAARHSRLVRTLRIAVPLVVALSMAAIIAISLFNPFRLLSKLPLEVGDLVVSGTKITMESPHMAGFTDDGRPYE MWARSATQDLTSQDHVDLHTLRAKVVSDDQSTVLIEARDGKFNTKAQLLNLQKDVYLRTSTGSEAWMTQADIDMSKGTVA SDEPVDVKWLGGTLRGQRLRITEKGDVIRFEGGVVMNLDNTAMPASAEAAAAQPTPASAPKADPAAKAKPSPATPRQRDA NRP >Mature_243_residues MEVRFAAAARHSRLVRTLRIAVPLVVALSMAAIIAISLFNPFRLLSKLPLEVGDLVVSGTKITMESPHMAGFTDDGRPYE MWARSATQDLTSQDHVDLHTLRAKVVSDDQSTVLIEARDGKFNTKAQLLNLQKDVYLRTSTGSEAWMTQADIDMSKGTVA SDEPVDVKWLGGTLRGQRLRITEKGDVIRFEGGVVMNLDNTAMPASAEAAAAQPTPASAPKADPAAKAKPSPATPRQRDA NRP
Specific function: Unknown
COG id: COG5375
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26301; Mature: 26301
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVRFAAAARHSRLVRTLRIAVPLVVALSMAAIIAISLFNPFRLLSKLPLEVGDLVVSGT CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECC KITMESPHMAGFTDDGRPYEMWARSATQDLTSQDHVDLHTLRAKVVSDDQSTVLIEARDG EEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCCEEEEEECCC KFNTKAQLLNLQKDVYLRTSTGSEAWMTQADIDMSKGTVASDEPVDVKWLGGTLRGQRLR CCCCHHHHHCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEE ITEKGDVIRFEGGVVMNLDNTAMPASAEAAAAQPTPASAPKADPAAKAKPSPATPRQRDA EECCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NRP CCC >Mature Secondary Structure MEVRFAAAARHSRLVRTLRIAVPLVVALSMAAIIAISLFNPFRLLSKLPLEVGDLVVSGT CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECC KITMESPHMAGFTDDGRPYEMWARSATQDLTSQDHVDLHTLRAKVVSDDQSTVLIEARDG EEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCCEEEEEECCC KFNTKAQLLNLQKDVYLRTSTGSEAWMTQADIDMSKGTVASDEPVDVKWLGGTLRGQRLR CCCCHHHHHCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEE ITEKGDVIRFEGGVVMNLDNTAMPASAEAAAAQPTPASAPKADPAAKAKPSPATPRQRDA EECCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NRP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA