| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yjeE [C]
Identifier: 86747751
GI number: 86747751
Start: 706206
End: 707723
Strand: Direct
Name: yjeE [C]
Synonym: RPB_0625
Alternate gene names: 86747751
Gene position: 706206-707723 (Clockwise)
Preceding gene: 86747750
Following gene: 86747752
Centisome position: 13.25
GC content: 70.55
Gene sequence:
>1518_bases ATGAGCGACCCCGCGACATTCTCGGTCGCGCTCGCCAACGAGGCGGCGACGGCGCGGCTGATGGCGGACATCGCGCTGCT GATCGGCCCGGGCGATGTCGTCACGCTGTCGGGCGATCTCGGCGCCGGCAAGACCGCCGCGGCGCGGGCGATGATCCGCT ATCTGGCCGGCGACGATGAGCTCGAAGTGCCGAGCCCGACCTTCACGCTGGTGCAGAGCTACGACCTGCCGCCGTTCCCG CTCCTGCACGCCGATCTGTATCGCGTCGAGGATCCGTCCGAACTCGAGGAGATCGGTCTGTCGCCGCTGCCGGACGGCAC GGTGGCGCTGATCGAATGGCCGGAGCGCGCGCCCGGCGCGATGCCGCCCGACCGCATCGACATCGCGCTCAGTCATCGCC CGGCACTCGGCTCGATGGCGCGCGCCGCCGAGATCACCGGCCACGGCAAGGCGGCCGCGCAGGTCGAGCGGCTGGCGGCG CTGCGCAGTTTCATCGAGACGTCGGGCCATGCTGACGCCGATCGCCGCCACATGCCGGGCGACGCCTCGACGCGGTCCTA TGCGCGGCTGGTCAAAGACGGCGCCTCGCTGATCCTGATGAACGCGCCGCGGCGGCCCGACGGGCCCGCTTTGTACGCCG GCAAGAGCTACAGCGCAGCCGTGCACCTCGCGGAAGACATCCGGCCGTTCGTCGCGATCGCGAACGGCCTGCGCGCGCAA GGCGTCTCGGCGCCGCAGATCCATCACGCCGATCTCGATTCCGGATTCCTGATCACCGAGGATTTCGGCACCGCGGGCTT CGTCGAAGGCTCGCCGCCCGTGCCGATCGTCGAGCGCTATCAGGCCGCGGCCGACATGCTGGCGGCGCTGCACGGCCAGT CGCTGCCCGATACGCTGCCGCTGCCGCACGGCGACTACGCGATCCCGGTGTTCGACACCGACGCGATGCTGATCGAGGTG TCGCTGATGCCGGAATGGTACCTGCCGGACCGCGGCGCCCCGCCCTCCGCCGCGCAGCGCGGCGAATTCGTCGCGATGTG GCGGCGCTTGCTCGACGGCATCGCCGGCGAGACGCGAACCTGGGTGCTGCGCGACTATCACTCGCCGAATCTGATCTGGC TCGACGCGCGCAGCGACATCGCCCGCGTCGGCGTGATCGACTTCCAGGACACCGTGCTCGGGCCCGCCGCCTACGACGTG GTGTCGCTGCTGCAGGACGCCCGCGTCGATGTGCCCGAAGCGCTCGAACTGGCGCTGCTCGGCCGCTACATCAAGGCCCG GCTCGCCGCCGAACCGGGCTTCGATCCGGCTGCTTTCGCGCGGCTCTATGCGGTGATGTCGGCGCAGCGCAACACAAGGC TGCTCGGCACCTTCGCGCGGCTCAACCGGCGCGACGGCAAGCCGCAATATCTGCGCCACCAGCCGCGGATCTGGACCTAT CTGGCCCGCTCCCTGGCGCATCCGTCGCTGGCCGAGTTCCGCGCCTGGTATCAGGCCAATGTGCCGGCGCCGTTCTGA
Upstream 100 bases:
>100_bases TGCACGGCGGCAAGGTCGAGGTCGATTCGGTGGTCGGGCACGGCACCTCGGTGATCTGCGAATTCCCGATCGAGCCGGGC GCGCAGCGCAACGCCGCCGA
Downstream 100 bases:
>100_bases TTTGAAAGGTCGAATTTACGTCTTGTTAGTCGGGCTTTCGCTAGGGTCGGCCTCCGTAGTCTTCCCAGGAACGGCATGCC GTTGCCGCTGTTTCGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MSDPATFSVALANEAATARLMADIALLIGPGDVVTLSGDLGAGKTAAARAMIRYLAGDDELEVPSPTFTLVQSYDLPPFP LLHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAPGAMPPDRIDIALSHRPALGSMARAAEITGHGKAAAQVERLAA LRSFIETSGHADADRRHMPGDASTRSYARLVKDGASLILMNAPRRPDGPALYAGKSYSAAVHLAEDIRPFVAIANGLRAQ GVSAPQIHHADLDSGFLITEDFGTAGFVEGSPPVPIVERYQAAADMLAALHGQSLPDTLPLPHGDYAIPVFDTDAMLIEV SLMPEWYLPDRGAPPSAAQRGEFVAMWRRLLDGIAGETRTWVLRDYHSPNLIWLDARSDIARVGVIDFQDTVLGPAAYDV VSLLQDARVDVPEALELALLGRYIKARLAAEPGFDPAAFARLYAVMSAQRNTRLLGTFARLNRRDGKPQYLRHQPRIWTY LARSLAHPSLAEFRAWYQANVPAPF
Sequences:
>Translated_505_residues MSDPATFSVALANEAATARLMADIALLIGPGDVVTLSGDLGAGKTAAARAMIRYLAGDDELEVPSPTFTLVQSYDLPPFP LLHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAPGAMPPDRIDIALSHRPALGSMARAAEITGHGKAAAQVERLAA LRSFIETSGHADADRRHMPGDASTRSYARLVKDGASLILMNAPRRPDGPALYAGKSYSAAVHLAEDIRPFVAIANGLRAQ GVSAPQIHHADLDSGFLITEDFGTAGFVEGSPPVPIVERYQAAADMLAALHGQSLPDTLPLPHGDYAIPVFDTDAMLIEV SLMPEWYLPDRGAPPSAAQRGEFVAMWRRLLDGIAGETRTWVLRDYHSPNLIWLDARSDIARVGVIDFQDTVLGPAAYDV VSLLQDARVDVPEALELALLGRYIKARLAAEPGFDPAAFARLYAVMSAQRNTRLLGTFARLNRRDGKPQYLRHQPRIWTY LARSLAHPSLAEFRAWYQANVPAPF >Mature_504_residues SDPATFSVALANEAATARLMADIALLIGPGDVVTLSGDLGAGKTAAARAMIRYLAGDDELEVPSPTFTLVQSYDLPPFPL LHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAPGAMPPDRIDIALSHRPALGSMARAAEITGHGKAAAQVERLAAL RSFIETSGHADADRRHMPGDASTRSYARLVKDGASLILMNAPRRPDGPALYAGKSYSAAVHLAEDIRPFVAIANGLRAQG VSAPQIHHADLDSGFLITEDFGTAGFVEGSPPVPIVERYQAAADMLAALHGQSLPDTLPLPHGDYAIPVFDTDAMLIEVS LMPEWYLPDRGAPPSAAQRGEFVAMWRRLLDGIAGETRTWVLRDYHSPNLIWLDARSDIARVGVIDFQDTVLGPAAYDVV SLLQDARVDVPEALELALLGRYIKARLAAEPGFDPAAFARLYAVMSAQRNTRLLGTFARLNRRDGKPQYLRHQPRIWTYL ARSLAHPSLAEFRAWYQANVPAPF
Specific function: Unknown
COG id: COG3178
COG function: function code R; Predicted phosphotransferase related to Ser/Thr protein kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=143, Percent_Identity=34.965034965035, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 54691; Mature: 54560
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS50007 PIPLC_X_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPATFSVALANEAATARLMADIALLIGPGDVVTLSGDLGAGKTAAARAMIRYLAGDDE CCCCCEEEEEECCCHHHHHHHHHEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC LEVPSPTFTLVQSYDLPPFPLLHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAPGA CCCCCCCEEEEECCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCC MPPDRIDIALSHRPALGSMARAAEITGHGKAAAQVERLAALRSFIETSGHADADRRHMPG CCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DASTRSYARLVKDGASLILMNAPRRPDGPALYAGKSYSAAVHLAEDIRPFVAIANGLRAQ CCCHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCHHEEHHHHHHHHHHHHHCCHHHC GVSAPQIHHADLDSGFLITEDFGTAGFVEGSPPVPIVERYQAAADMLAALHGQSLPDTLP CCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC LPHGDYAIPVFDTDAMLIEVSLMPEWYLPDRGAPPSAAQRGEFVAMWRRLLDGIAGETRT CCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCEE WVLRDYHSPNLIWLDARSDIARVGVIDFQDTVLGPAAYDVVSLLQDARVDVPEALELALL EEEEECCCCCEEEEECCCCEEEEEEEECHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHH GRYIKARLAAEPGFDPAAFARLYAVMSAQRNTRLLGTFARLNRRDGKPQYLRHQPRIWTY HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCCCHHHHH LARSLAHPSLAEFRAWYQANVPAPF HHHHHCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure SDPATFSVALANEAATARLMADIALLIGPGDVVTLSGDLGAGKTAAARAMIRYLAGDDE CCCCEEEEEECCCHHHHHHHHHEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC LEVPSPTFTLVQSYDLPPFPLLHADLYRVEDPSELEEIGLSPLPDGTVALIEWPERAPGA CCCCCCCEEEEECCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCC MPPDRIDIALSHRPALGSMARAAEITGHGKAAAQVERLAALRSFIETSGHADADRRHMPG CCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DASTRSYARLVKDGASLILMNAPRRPDGPALYAGKSYSAAVHLAEDIRPFVAIANGLRAQ CCCHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCHHEEHHHHHHHHHHHHHCCHHHC GVSAPQIHHADLDSGFLITEDFGTAGFVEGSPPVPIVERYQAAADMLAALHGQSLPDTLP CCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC LPHGDYAIPVFDTDAMLIEVSLMPEWYLPDRGAPPSAAQRGEFVAMWRRLLDGIAGETRT CCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCEE WVLRDYHSPNLIWLDARSDIARVGVIDFQDTVLGPAAYDVVSLLQDARVDVPEALELALL EEEEECCCCCEEEEECCCCEEEEEEEECHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHH GRYIKARLAAEPGFDPAAFARLYAVMSAQRNTRLLGTFARLNRRDGKPQYLRHQPRIWTY HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCCCHHHHH LARSLAHPSLAEFRAWYQANVPAPF HHHHHCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]