Click here to switch to the map view.

The map label for this gene is 86747744

Identifier: 86747744

GI number: 86747744

Start: 696546

End: 697928

Strand: Direct

Name: 86747744

Synonym: RPB_0618

Alternate gene names: NA

Gene position: 696546-697928 (Clockwise)

Preceding gene: 86747742

Following gene: 86747746

Centisome position: 13.06

GC content: 68.91

Gene sequence:

>1383_bases
ATGAGAACGATGCTGGCCGCAACCTTGATGATCGCGAGCGCCACCGGCCTCGCCGCGGCGCAGACCGCGCCGCCGTCCGG
TGCCGTGCCCGCCGTCAAGCCGAAGCCGGTGGCGACCACGCCGGTTCGCCCGGCGCTGCAGACCCCGGCCGAGACCGCGC
AGGCGATGACGCCCGCCGAGCGCCAGGCGATCCAGTCGGATCTCGCCTGGACCGGCGACTACAACGGCGTCATCAATGGC
GAGCCGTCCGAGCGCATGGTCACGGCCATCAAGGCGTTCCAGAAGAATCACGGCGGCAAGCAGACCGGCGTGCTCAATCC
GCAGGAGCGCGCCCAGCTCACCGAGGCCGCGCGAAAACTGCAGGGCAATGTCGGCTGGAAGCTGATCAGCGATATGGTCA
CCGGCGCGCGGCTCGGGATTCCGGCCAAGCTGGTGCCGCAGCAGACCTCCGACGCCAATGGCAGCAAATGGGCGTCGTCG
ACCGGCACCATCCAGATCGTGCTGGCGCGGCGCAAGGAGGCCGGAATCACCATCGCGAAACTCGCCGATCAGGAGAAGAA
GGAGCCGGGCCGCAAGGTCGGCTACAGCGCGATCAAACCGGATTTCTTCGTGCTGTCGGGCACCCAGGGTCTGAAGAAGT
TCTACATGCGCGGCGCCTTCAAGGATTCCGAGGTCCGCATTCTCACCATCCTGTACGATCAGGCCACCGAGGGCACGATG
GAGCCGGTGGTGGTCGCGATGTCGAGCGCGTTCAATCCGTTCCCCTCGGGCGCCCTGGCCGGTCCGCCGCCACGCAAAAA
GGTCGAGTACTCGACCGGCACCATCGTCAGCGACGACGGCGCCATCCTGGCCGATCGCGACGCGGTCGAGGCCTGCCAGT
CGATCGTGATCGCAGGACAAATCGCAGCACACGGCAATGCCGACCTCGCCGCCACCGACAAGGCGCATGATCTGGCGCTG
CTGCGGATCTATGGCGCGCGCGGCCTGAAGCCGCTGGCGCTCGGCAGCGGCGCGGCGAAAGCGTCGGTCGATGTCGTCGG
CATCGCTGATCCGCAGAATCAGGGCGGTGGTTCGGCGGTCAGCGTCAGCAAGGCCGGCGTCACACCGGTCGGCAGCAATG
GCGGTCTCGCGCTGGCACCCGCGCCCGGCCTCGGCTTCTCCGGCGCCCCGGCGCGTGACGCCGACGGCCGTTTCGCCGGC
CTCGCGCTGCTGCGCCCGTCGGTCGTCGCCGGCGCAACCAACGGCGCCGTCGCGCCGCAAGCGGCGCTGGTGGATGCCGA
GACGGTGCGTAAGTTTCTCGTGAGCAACGCCATCAAGCCCGCCACCGACGCGCCCGCCGACGCCAAGGCCAGCGTCGTGC
GCGTGATCTGCGTGCGGAAGTAA

Upstream 100 bases:

>100_bases
CCGGCCCCGAACATCGAACCCGGCGGCGATTGTTTCCGACCAAGCATCTATGGTTATCTGCGCCGGACTCAACCGACGCG
CGACACAAGGCGGAATTGTC

Downstream 100 bases:

>100_bases
CAACTATCACCGGCGCCGTGCCCGCGTCGCCCTCACCCCACCCCTCTCCCGCAAGCGGGAGAGAGAGTCCGGCCGCATCG
CGGGGCGACTTATGAGAATG

Product: peptidoglycan binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MRTMLAATLMIASATGLAAAQTAPPSGAVPAVKPKPVATTPVRPALQTPAETAQAMTPAERQAIQSDLAWTGDYNGVING
EPSERMVTAIKAFQKNHGGKQTGVLNPQERAQLTEAARKLQGNVGWKLISDMVTGARLGIPAKLVPQQTSDANGSKWASS
TGTIQIVLARRKEAGITIAKLADQEKKEPGRKVGYSAIKPDFFVLSGTQGLKKFYMRGAFKDSEVRILTILYDQATEGTM
EPVVVAMSSAFNPFPSGALAGPPPRKKVEYSTGTIVSDDGAILADRDAVEACQSIVIAGQIAAHGNADLAATDKAHDLAL
LRIYGARGLKPLALGSGAAKASVDVVGIADPQNQGGGSAVSVSKAGVTPVGSNGGLALAPAPGLGFSGAPARDADGRFAG
LALLRPSVVAGATNGAVAPQAALVDAETVRKFLVSNAIKPATDAPADAKASVVRVICVRK

Sequences:

>Translated_460_residues
MRTMLAATLMIASATGLAAAQTAPPSGAVPAVKPKPVATTPVRPALQTPAETAQAMTPAERQAIQSDLAWTGDYNGVING
EPSERMVTAIKAFQKNHGGKQTGVLNPQERAQLTEAARKLQGNVGWKLISDMVTGARLGIPAKLVPQQTSDANGSKWASS
TGTIQIVLARRKEAGITIAKLADQEKKEPGRKVGYSAIKPDFFVLSGTQGLKKFYMRGAFKDSEVRILTILYDQATEGTM
EPVVVAMSSAFNPFPSGALAGPPPRKKVEYSTGTIVSDDGAILADRDAVEACQSIVIAGQIAAHGNADLAATDKAHDLAL
LRIYGARGLKPLALGSGAAKASVDVVGIADPQNQGGGSAVSVSKAGVTPVGSNGGLALAPAPGLGFSGAPARDADGRFAG
LALLRPSVVAGATNGAVAPQAALVDAETVRKFLVSNAIKPATDAPADAKASVVRVICVRK
>Mature_460_residues
MRTMLAATLMIASATGLAAAQTAPPSGAVPAVKPKPVATTPVRPALQTPAETAQAMTPAERQAIQSDLAWTGDYNGVING
EPSERMVTAIKAFQKNHGGKQTGVLNPQERAQLTEAARKLQGNVGWKLISDMVTGARLGIPAKLVPQQTSDANGSKWASS
TGTIQIVLARRKEAGITIAKLADQEKKEPGRKVGYSAIKPDFFVLSGTQGLKKFYMRGAFKDSEVRILTILYDQATEGTM
EPVVVAMSSAFNPFPSGALAGPPPRKKVEYSTGTIVSDDGAILADRDAVEACQSIVIAGQIAAHGNADLAATDKAHDLAL
LRIYGARGLKPLALGSGAAKASVDVVGIADPQNQGGGSAVSVSKAGVTPVGSNGGLALAPAPGLGFSGAPARDADGRFAG
LALLRPSVVAGATNGAVAPQAALVDAETVRKFLVSNAIKPATDAPADAKASVVRVICVRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47104; Mature: 47104

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTMLAATLMIASATGLAAAQTAPPSGAVPAVKPKPVATTPVRPALQTPAETAQAMTPAE
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHH
RQAIQSDLAWTGDYNGVINGEPSERMVTAIKAFQKNHGGKQTGVLNPQERAQLTEAARKL
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
QGNVGWKLISDMVTGARLGIPAKLVPQQTSDANGSKWASSTGTIQIVLARRKEAGITIAK
CCCCCHHHHHHHHCCHHCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEHHH
LADQEKKEPGRKVGYSAIKPDFFVLSGTQGLKKFYMRGAFKDSEVRILTILYDQATEGTM
HHCHHHHCCCHHCCCHHCCCCEEEEECCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC
EPVVVAMSSAFNPFPSGALAGPPPRKKVEYSTGTIVSDDGAILADRDAVEACQSIVIAGQ
CHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCEEECCHHHHHHHHHHHEEE
IAAHGNADLAATDKAHDLALLRIYGARGLKPLALGSGAAKASVDVVGIADPQNQGGGSAV
EEECCCCCEEECCCCCCEEEEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCEE
SVSKAGVTPVGSNGGLALAPAPGLGFSGAPARDADGRFAGLALLRPSVVAGATNGAVAPQ
EEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEHEECCCHHEECCCCCCCCCH
AALVDAETVRKFLVSNAIKPATDAPADAKASVVRVICVRK
HHHCCHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEEEECC
>Mature Secondary Structure
MRTMLAATLMIASATGLAAAQTAPPSGAVPAVKPKPVATTPVRPALQTPAETAQAMTPAE
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHH
RQAIQSDLAWTGDYNGVINGEPSERMVTAIKAFQKNHGGKQTGVLNPQERAQLTEAARKL
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
QGNVGWKLISDMVTGARLGIPAKLVPQQTSDANGSKWASSTGTIQIVLARRKEAGITIAK
CCCCCHHHHHHHHCCHHCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEHHH
LADQEKKEPGRKVGYSAIKPDFFVLSGTQGLKKFYMRGAFKDSEVRILTILYDQATEGTM
HHCHHHHCCCHHCCCHHCCCCEEEEECCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC
EPVVVAMSSAFNPFPSGALAGPPPRKKVEYSTGTIVSDDGAILADRDAVEACQSIVIAGQ
CHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCEEECCHHHHHHHHHHHEEE
IAAHGNADLAATDKAHDLALLRIYGARGLKPLALGSGAAKASVDVVGIADPQNQGGGSAV
EEECCCCCEEECCCCCCEEEEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCEE
SVSKAGVTPVGSNGGLALAPAPGLGFSGAPARDADGRFAGLALLRPSVVAGATNGAVAPQ
EEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEHEECCCHHEECCCCCCCCCH
AALVDAETVRKFLVSNAIKPATDAPADAKASVVRVICVRK
HHHCCHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA