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The map label for this gene is rimP [H]

Identifier: 86747723

GI number: 86747723

Start: 670170

End: 670949

Strand: Direct

Name: rimP [H]

Synonym: RPB_0597

Alternate gene names: 86747723

Gene position: 670170-670949 (Clockwise)

Preceding gene: 86747722

Following gene: 86747724

Centisome position: 12.57

GC content: 69.23

Gene sequence:

>780_bases
ATGACCGATCCCATCGCCGATTCCGTCGCCCCCGATTTGCTGGACGAGCCGCGCCTGGTGGTCGAGCCCGGCGTCGCCGC
GCGGTTCGGCGCGGTCGCCGAGCCGGTGCTGCTGGCGATGGGCTATCGGCTGGTGCGGATCAAGGTGTCGGCCGAGGCCG
GCTGCACCGTGCAGATCATGGCCGAGCGGCCCGACGGCACTATGCTGATCGAGGATTGCGAGGCGGTGTCGAAGGCGCTG
TCGCCGGTGCTCGACGTCACCGATCCGATCGAGAAGGCCTACCGGCTGGAGATTTCGTCGCCCGGAATCGACCGCCCGCT
GGTGCGGCGTTCGGATTTCGCCCGCTACAGCGGCCATCTGGTCAAGATCGAGATGGCGGTGCCGCATCAGGGCCGCAAGC
GCTATCGCGGCCTGCTCGACGGCGTCGAGGGCGACGCCATCCGGATCCAGCGCGAGGGCGTCAAGGACGAAGACCCGCTG
GTGCTGCTGCCGATGCACGACATCGGCGACGCGCGGCTGGTGCTGACCGACGAACTGATCGCCGAATCGATGCGCCGCGG
CAAGCAGGCCGAACGCGAGCTGAAGCAGAGCCTCGGGCTGGCGCCGCCGCCGCCGCCGCACGCCAAGCGCAGCGATCCGA
AAAAGAGCAACGCGCCGAAGCCGAAGCCGAAGCCGCCCGTGAAAGCGGCCGCCAAGCCGAAGCCCACCAATACCAAGCAA
CATCGTCTCGCCGCCGGCAGGTCGCGGCGTGGCGACACCGACCTGTCCGAGGGAGACTGA

Upstream 100 bases:

>100_bases
CGAAACGTATCGCCGGACCGACCCTCCGGATTGCCGCTGACACCATTGGAAAGCGCCGAGACTGCCCCAAGCTGACCGCC
AAAGCCCGATCGAGCCGGAC

Downstream 100 bases:

>100_bases
CCATGGCCGTCAGCGCCAACAAGCTGGAATTGCTGCAGATCGCCGACGCGGTGGCGCGGGAGAAATCGATCGACCGCGGC
ATCGTGATCGCCGCGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTDPIADSVAPDLLDEPRLVVEPGVAARFGAVAEPVLLAMGYRLVRIKVSAEAGCTVQIMAERPDGTMLIEDCEAVSKAL
SPVLDVTDPIEKAYRLEISSPGIDRPLVRRSDFARYSGHLVKIEMAVPHQGRKRYRGLLDGVEGDAIRIQREGVKDEDPL
VLLPMHDIGDARLVLTDELIAESMRRGKQAERELKQSLGLAPPPPPHAKRSDPKKSNAPKPKPKPPVKAAAKPKPTNTKQ
HRLAAGRSRRGDTDLSEGD

Sequences:

>Translated_259_residues
MTDPIADSVAPDLLDEPRLVVEPGVAARFGAVAEPVLLAMGYRLVRIKVSAEAGCTVQIMAERPDGTMLIEDCEAVSKAL
SPVLDVTDPIEKAYRLEISSPGIDRPLVRRSDFARYSGHLVKIEMAVPHQGRKRYRGLLDGVEGDAIRIQREGVKDEDPL
VLLPMHDIGDARLVLTDELIAESMRRGKQAERELKQSLGLAPPPPPHAKRSDPKKSNAPKPKPKPPVKAAAKPKPTNTKQ
HRLAAGRSRRGDTDLSEGD
>Mature_258_residues
TDPIADSVAPDLLDEPRLVVEPGVAARFGAVAEPVLLAMGYRLVRIKVSAEAGCTVQIMAERPDGTMLIEDCEAVSKALS
PVLDVTDPIEKAYRLEISSPGIDRPLVRRSDFARYSGHLVKIEMAVPHQGRKRYRGLLDGVEGDAIRIQREGVKDEDPLV
LLPMHDIGDARLVLTDELIAESMRRGKQAERELKQSLGLAPPPPPHAKRSDPKKSNAPKPKPKPPVKAAAKPKPTNTKQH
RLAAGRSRRGDTDLSEGD

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=136, Percent_Identity=38.2352941176471, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 28238; Mature: 28107

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPIADSVAPDLLDEPRLVVEPGVAARFGAVAEPVLLAMGYRLVRIKVSAEAGCTVQIM
CCCCCCHHHCHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEE
AERPDGTMLIEDCEAVSKALSPVLDVTDPIEKAYRLEISSPGIDRPLVRRSDFARYSGHL
EECCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCCE
VKIEMAVPHQGRKRYRGLLDGVEGDAIRIQREGVKDEDPLVLLPMHDIGDARLVLTDELI
EEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEHHHH
AESMRRGKQAERELKQSLGLAPPPPPHAKRSDPKKSNAPKPKPKPPVKAAAKPKPTNTKQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
HRLAAGRSRRGDTDLSEGD
HHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDPIADSVAPDLLDEPRLVVEPGVAARFGAVAEPVLLAMGYRLVRIKVSAEAGCTVQIM
CCCCCHHHCHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEE
AERPDGTMLIEDCEAVSKALSPVLDVTDPIEKAYRLEISSPGIDRPLVRRSDFARYSGHL
EECCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCCE
VKIEMAVPHQGRKRYRGLLDGVEGDAIRIQREGVKDEDPLVLLPMHDIGDARLVLTDELI
EEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEHHHH
AESMRRGKQAERELKQSLGLAPPPPPHAKRSDPKKSNAPKPKPKPPVKAAAKPKPTNTKQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
HRLAAGRSRRGDTDLSEGD
HHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA