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The map label for this gene is 86747721

Identifier: 86747721

GI number: 86747721

Start: 668322

End: 668741

Strand: Direct

Name: 86747721

Synonym: RPB_0595

Alternate gene names: NA

Gene position: 668322-668741 (Clockwise)

Preceding gene: 86747720

Following gene: 86747722

Centisome position: 12.53

GC content: 61.9

Gene sequence:

>420_bases
ATGTCGACCAAAGCGCCCAATCCTGTTGACAAATACGTCGGCAGCCGTGTGCGCATGCGACGCATCATGCTCGGCATGAG
CCAGGAAAAGCTCGGCGAAGCATTGGGCCTGACCTTCCAGCAAGTGCAGAAATACGAGAAGGGCACCAACCGCGTCGGTG
CCAGCCGGATTCAGCAGATCTCGGAAGTTCTTCAAGTGCCGGTGTCGTTTCTGTTCGAAGGCGGCCCCAGCGGGGGCCTC
GCCAACGGCAGCGGTTTCAGCGAAGCGCCGTCACCGTCGTATGTGTCCGACTTCCTCGCGACGTCGGAAGGCCTGGCGCT
GACGCGCGCCTTCACCAAGATCACCGATGCCAAGCTTCGCCGCAGCATCGTCGATCTGGTCGAGCAAATCGCCGCGCGCG
AGCCGAACGAGTCGCACTGA

Upstream 100 bases:

>100_bases
TCCGAAGGCATTTGACGGCTTCGATATTTCAGGCGTATTCCATCCCGCGATCGCAGTCGCTTCCTGTTAGCGACTGCATG
TGCCTTGAGGAGTAACTGAG

Downstream 100 bases:

>100_bases
CTTTAGCACTTCATTAACCGCCGCGATCCGTGCGCTGAACTAATTCAGTGCCACGGATCGCGGCGATTTGTTTGTGTCGT
GGGTTGAACTAATTCCGACT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSTKAPNPVDKYVGSRVRMRRIMLGMSQEKLGEALGLTFQQVQKYEKGTNRVGASRIQQISEVLQVPVSFLFEGGPSGGL
ANGSGFSEAPSPSYVSDFLATSEGLALTRAFTKITDAKLRRSIVDLVEQIAAREPNESH

Sequences:

>Translated_139_residues
MSTKAPNPVDKYVGSRVRMRRIMLGMSQEKLGEALGLTFQQVQKYEKGTNRVGASRIQQISEVLQVPVSFLFEGGPSGGL
ANGSGFSEAPSPSYVSDFLATSEGLALTRAFTKITDAKLRRSIVDLVEQIAAREPNESH
>Mature_138_residues
STKAPNPVDKYVGSRVRMRRIMLGMSQEKLGEALGLTFQQVQKYEKGTNRVGASRIQQISEVLQVPVSFLFEGGPSGGLA
NGSGFSEAPSPSYVSDFLATSEGLALTRAFTKITDAKLRRSIVDLVEQIAAREPNESH

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 15089; Mature: 14958

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKAPNPVDKYVGSRVRMRRIMLGMSQEKLGEALGLTFQQVQKYEKGTNRVGASRIQQI
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SEVLQVPVSFLFEGGPSGGLANGSGFSEAPSPSYVSDFLATSEGLALTRAFTKITDAKLR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RSIVDLVEQIAAREPNESH
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
STKAPNPVDKYVGSRVRMRRIMLGMSQEKLGEALGLTFQQVQKYEKGTNRVGASRIQQI
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SEVLQVPVSFLFEGGPSGGLANGSGFSEAPSPSYVSDFLATSEGLALTRAFTKITDAKLR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RSIVDLVEQIAAREPNESH
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]