Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is phoH [H]
Identifier: 86747717
GI number: 86747717
Start: 663749
End: 664783
Strand: Direct
Name: phoH [H]
Synonym: RPB_0591
Alternate gene names: 86747717
Gene position: 663749-664783 (Clockwise)
Preceding gene: 86747716
Following gene: 86747718
Centisome position: 12.45
GC content: 68.6
Gene sequence:
>1035_bases ATGTCCCGCCGCAAGCCCGATCGCGATTCCCTGACCCCGCCCGAAGCCCAGCCCGAGACTCAGGTCGTCATCGCCTTCGA CGACAACCGCGCCGCCTCGGCGCTGGTCGGGCCGTATGGCCAGAACCTCGCCCAGATCGAGCGCCGGCTCGCCGTGGTGG TGGATTCGCGCGGCAACCACATCACCATCGCGGGCTCCCGCGAGGGCTGCGACGCCGCCCGGCGGGTGCTGGAAGCGCTG TATGCTCAGGCGGTGGCGGGCAACGATCTCAGCCAGGGCGACGTCGACGGCGCGATCCGCGCGGTGATCGCGCAGGGCTC GCTGTTCGAGTTCGACGCCAAATCGACCGCCGGCGCGTTCGAGGCGATCAATCTGCGCAAGCGCCCGGTGCGGGCGCGCA CCGCGGCGCAGGATTCCTACATCCGGGCGCTGAAGCGCCACGAGCTGGTGTTCGGCGTCGGCCCGGCCGGCACCGGCAAG ACCTGGCTCGCGGTCGCCCATGCGGCGCAATTGTTCGAACGCAAGGAAGTCGACAAGATCATCCTCACCCGCCCCGCGGT CGAGGCCGGCGAGCGGCTCGGCTTCCTGCCGGGCGATCTGCGCGAGAAGGTCGATCCGTATCTGCGGCCGATCTACGACG CGCTGTATGATCTGATGGATTCGCGGATCGTCGAGCGCGCGCTGCAGACCAACGAGATCGAGATCGCGCCGCTCGCCTTC ATGCGCGGCCGCACTTTGACCAACGCCGCCATCATCCTCGACGAGGCGCAGAACACCACCTCGATGCAGATGAAAATGTT TCTCACCCGGCTCGGCGAGAACTCGCGGATGATCGTCACCGGCGACCCGAGCCAGGTCGACCTGCCGAACGGCCAGACCT CGGGACTGTCCGAGGCCGTGAAGCTGCTGGCCGGCGTCGAGGGCATCGCCCAGGTCAAGTTCACCGCCGAGGACGTCATT CGCCACGAATTGGTGGCGCGGATCGTCGCCGCCTATGAGGGGATCCCGCCGAAACCGGCGGGCGGCGCAGCCTGA
Upstream 100 bases:
>100_bases TCGGCGAACTGGCGGCCACGCCGCCGCGGCATGCTCGTCCTCTGGCCGCCACAGGAGCCTGAGCCCCTTGGCAAAAAGCG CATCGGAGTCGTCCTCGCTG
Downstream 100 bases:
>100_bases TGTCACAATTCAAAACCGGGAGCCGTGCCGATTGCATCGGGCCGGCTCGGGGCAGTAATTTCGGACCGATGAGTCATTCC GCCGTTCCCGCCACCGAGGT
Product: PhoH-like protein, phosphate starvation inducible
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSRRKPDRDSLTPPEAQPETQVVIAFDDNRAASALVGPYGQNLAQIERRLAVVVDSRGNHITIAGSREGCDAARRVLEAL YAQAVAGNDLSQGDVDGAIRAVIAQGSLFEFDAKSTAGAFEAINLRKRPVRARTAAQDSYIRALKRHELVFGVGPAGTGK TWLAVAHAAQLFERKEVDKIILTRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDSRIVERALQTNEIEIAPLAF MRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIVTGDPSQVDLPNGQTSGLSEAVKLLAGVEGIAQVKFTAEDVI RHELVARIVAAYEGIPPKPAGGAA
Sequences:
>Translated_344_residues MSRRKPDRDSLTPPEAQPETQVVIAFDDNRAASALVGPYGQNLAQIERRLAVVVDSRGNHITIAGSREGCDAARRVLEAL YAQAVAGNDLSQGDVDGAIRAVIAQGSLFEFDAKSTAGAFEAINLRKRPVRARTAAQDSYIRALKRHELVFGVGPAGTGK TWLAVAHAAQLFERKEVDKIILTRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDSRIVERALQTNEIEIAPLAF MRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIVTGDPSQVDLPNGQTSGLSEAVKLLAGVEGIAQVKFTAEDVI RHELVARIVAAYEGIPPKPAGGAA >Mature_343_residues SRRKPDRDSLTPPEAQPETQVVIAFDDNRAASALVGPYGQNLAQIERRLAVVVDSRGNHITIAGSREGCDAARRVLEALY AQAVAGNDLSQGDVDGAIRAVIAQGSLFEFDAKSTAGAFEAINLRKRPVRARTAAQDSYIRALKRHELVFGVGPAGTGKT WLAVAHAAQLFERKEVDKIILTRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDSRIVERALQTNEIEIAPLAFM RGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIVTGDPSQVDLPNGQTSGLSEAVKLLAGVEGIAQVKFTAEDVIR HELVARIVAAYEGIPPKPAGGAA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=309, Percent_Identity=48.5436893203884, Blast_Score=284, Evalue=6e-78, Organism=Escherichia coli, GI1787257, Length=222, Percent_Identity=47.7477477477478, Blast_Score=214, Evalue=7e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 37223; Mature: 37092
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRKPDRDSLTPPEAQPETQVVIAFDDNRAASALVGPYGQNLAQIERRLAVVVDSRGNH CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHEEEEECCCCE ITIAGSREGCDAARRVLEALYAQAVAGNDLSQGDVDGAIRAVIAQGSLFEFDAKSTAGAF EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHH EAINLRKRPVRARTAAQDSYIRALKRHELVFGVGPAGTGKTWLAVAHAAQLFERKEVDKI HHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH ILTRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDSRIVERALQTNEIEIAPLAF EEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH MRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIVTGDPSQVDLPNGQTSGLSEAV HCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCHHHHH KLLAGVEGIAQVKFTAEDVIRHELVARIVAAYEGIPPKPAGGAA HHHHCCCHHHHEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SRRKPDRDSLTPPEAQPETQVVIAFDDNRAASALVGPYGQNLAQIERRLAVVVDSRGNH CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHEEEEECCCCE ITIAGSREGCDAARRVLEALYAQAVAGNDLSQGDVDGAIRAVIAQGSLFEFDAKSTAGAF EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHH EAINLRKRPVRARTAAQDSYIRALKRHELVFGVGPAGTGKTWLAVAHAAQLFERKEVDKI HHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH ILTRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDSRIVERALQTNEIEIAPLAF EEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH MRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIVTGDPSQVDLPNGQTSGLSEAV HCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCHHHHH KLLAGVEGIAQVKFTAEDVIRHELVARIVAAYEGIPPKPAGGAA HHHHCCCHHHHEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]