Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86747647
Identifier: 86747647
GI number: 86747647
Start: 582218
End: 582835
Strand: Reverse
Name: 86747647
Synonym: RPB_0521
Alternate gene names: NA
Gene position: 582835-582218 (Counterclockwise)
Preceding gene: 86747648
Following gene: 86747644
Centisome position: 10.93
GC content: 53.24
Gene sequence:
>618_bases ATGCAAAACCGTTCACATGCCGTGATGGCTCAAAGGGCCGAAGCCTCCGACAGTCCTGATGATTTTCCGACGCCTCCATG GGCGACGAGGGGGTTCATGGAGTATGTCATTGCAGATAAGGGTCCTTTCTCTAATATGACCGCCCTTGAGCCAGCTTGCG GAGCGGGGCACATGGCAAAAGTACTCAAGGAGTATTTTGGGGAGGTGCGCTCCTCCGATGCCTACGCTTATGGATACGCA CCGGTTCGCGATTATCTTGACGTCCCTTACGAGGCGAACGCTGTGGACTGGGTGATTACTAATCCACCCTTTCGGCTCGC AGAGGAATTCGTTCACCGGTCGCTCATCGTAGCGCGAGTGGGCGTTGCGGTGTTGGTGAGAACTGTGTTTATTGAAAGCT CAGGACGATATCGTGCCCTGTTTGAGAAAAATCCACCTACAAAATTTGCTCAGTTTGTTGAGCGCGTACCAATGGTTCGG GGCAGATTAGACAGGAAGGCATCGACGGCAACAGGCTACGCTTGGCTGGTATGGGAGAAAGACGAACCGACTACGTCGCA CCTGATGTGGGTACCTCCCTGCCGAAAGAGGTTTGAAAGAGATACAGACTACTCCTGA
Upstream 100 bases:
>100_bases CACTTTGATCTTGCTCTCTGCGGTCATTTGGCCGCGGCGCTAGGATTATGTTAACCACAAAAGAACAAAATCAGAACGAT TCGCCGCCGGGAAAAACGAG
Downstream 100 bases:
>100_bases TCGTCAAGTTCACGCGCGTCGGCGAGGCCCTGCTCGATATTCTGGAGAGCTTCCTCCAGAGCCGCCTTAGCCTGTTCCAG CGCAGCCACAGCCTTTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MQNRSHAVMAQRAEASDSPDDFPTPPWATRGFMEYVIADKGPFSNMTALEPACGAGHMAKVLKEYFGEVRSSDAYAYGYA PVRDYLDVPYEANAVDWVITNPPFRLAEEFVHRSLIVARVGVAVLVRTVFIESSGRYRALFEKNPPTKFAQFVERVPMVR GRLDRKASTATGYAWLVWEKDEPTTSHLMWVPPCRKRFERDTDYS
Sequences:
>Translated_205_residues MQNRSHAVMAQRAEASDSPDDFPTPPWATRGFMEYVIADKGPFSNMTALEPACGAGHMAKVLKEYFGEVRSSDAYAYGYA PVRDYLDVPYEANAVDWVITNPPFRLAEEFVHRSLIVARVGVAVLVRTVFIESSGRYRALFEKNPPTKFAQFVERVPMVR GRLDRKASTATGYAWLVWEKDEPTTSHLMWVPPCRKRFERDTDYS >Mature_205_residues MQNRSHAVMAQRAEASDSPDDFPTPPWATRGFMEYVIADKGPFSNMTALEPACGAGHMAKVLKEYFGEVRSSDAYAYGYA PVRDYLDVPYEANAVDWVITNPPFRLAEEFVHRSLIVARVGVAVLVRTVFIESSGRYRALFEKNPPTKFAQFVERVPMVR GRLDRKASTATGYAWLVWEKDEPTTSHLMWVPPCRKRFERDTDYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23337; Mature: 23337
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNRSHAVMAQRAEASDSPDDFPTPPWATRGFMEYVIADKGPFSNMTALEPACGAGHMAK CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH VLKEYFGEVRSSDAYAYGYAPVRDYLDVPYEANAVDWVITNPPFRLAEEFVHRSLIVARV HHHHHHHHHHCCCCEEECCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH GVAVLVRTVFIESSGRYRALFEKNPPTKFAQFVERVPMVRGRLDRKASTATGYAWLVWEK HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC DEPTTSHLMWVPPCRKRFERDTDYS CCCCCCEEEECCHHHHHCCCCCCCC >Mature Secondary Structure MQNRSHAVMAQRAEASDSPDDFPTPPWATRGFMEYVIADKGPFSNMTALEPACGAGHMAK CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH VLKEYFGEVRSSDAYAYGYAPVRDYLDVPYEANAVDWVITNPPFRLAEEFVHRSLIVARV HHHHHHHHHHCCCCEEECCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH GVAVLVRTVFIESSGRYRALFEKNPPTKFAQFVERVPMVRGRLDRKASTATGYAWLVWEK HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC DEPTTSHLMWVPPCRKRFERDTDYS CCCCCCEEEECCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA