Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86747647

Identifier: 86747647

GI number: 86747647

Start: 582218

End: 582835

Strand: Reverse

Name: 86747647

Synonym: RPB_0521

Alternate gene names: NA

Gene position: 582835-582218 (Counterclockwise)

Preceding gene: 86747648

Following gene: 86747644

Centisome position: 10.93

GC content: 53.24

Gene sequence:

>618_bases
ATGCAAAACCGTTCACATGCCGTGATGGCTCAAAGGGCCGAAGCCTCCGACAGTCCTGATGATTTTCCGACGCCTCCATG
GGCGACGAGGGGGTTCATGGAGTATGTCATTGCAGATAAGGGTCCTTTCTCTAATATGACCGCCCTTGAGCCAGCTTGCG
GAGCGGGGCACATGGCAAAAGTACTCAAGGAGTATTTTGGGGAGGTGCGCTCCTCCGATGCCTACGCTTATGGATACGCA
CCGGTTCGCGATTATCTTGACGTCCCTTACGAGGCGAACGCTGTGGACTGGGTGATTACTAATCCACCCTTTCGGCTCGC
AGAGGAATTCGTTCACCGGTCGCTCATCGTAGCGCGAGTGGGCGTTGCGGTGTTGGTGAGAACTGTGTTTATTGAAAGCT
CAGGACGATATCGTGCCCTGTTTGAGAAAAATCCACCTACAAAATTTGCTCAGTTTGTTGAGCGCGTACCAATGGTTCGG
GGCAGATTAGACAGGAAGGCATCGACGGCAACAGGCTACGCTTGGCTGGTATGGGAGAAAGACGAACCGACTACGTCGCA
CCTGATGTGGGTACCTCCCTGCCGAAAGAGGTTTGAAAGAGATACAGACTACTCCTGA

Upstream 100 bases:

>100_bases
CACTTTGATCTTGCTCTCTGCGGTCATTTGGCCGCGGCGCTAGGATTATGTTAACCACAAAAGAACAAAATCAGAACGAT
TCGCCGCCGGGAAAAACGAG

Downstream 100 bases:

>100_bases
TCGTCAAGTTCACGCGCGTCGGCGAGGCCCTGCTCGATATTCTGGAGAGCTTCCTCCAGAGCCGCCTTAGCCTGTTCCAG
CGCAGCCACAGCCTTTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MQNRSHAVMAQRAEASDSPDDFPTPPWATRGFMEYVIADKGPFSNMTALEPACGAGHMAKVLKEYFGEVRSSDAYAYGYA
PVRDYLDVPYEANAVDWVITNPPFRLAEEFVHRSLIVARVGVAVLVRTVFIESSGRYRALFEKNPPTKFAQFVERVPMVR
GRLDRKASTATGYAWLVWEKDEPTTSHLMWVPPCRKRFERDTDYS

Sequences:

>Translated_205_residues
MQNRSHAVMAQRAEASDSPDDFPTPPWATRGFMEYVIADKGPFSNMTALEPACGAGHMAKVLKEYFGEVRSSDAYAYGYA
PVRDYLDVPYEANAVDWVITNPPFRLAEEFVHRSLIVARVGVAVLVRTVFIESSGRYRALFEKNPPTKFAQFVERVPMVR
GRLDRKASTATGYAWLVWEKDEPTTSHLMWVPPCRKRFERDTDYS
>Mature_205_residues
MQNRSHAVMAQRAEASDSPDDFPTPPWATRGFMEYVIADKGPFSNMTALEPACGAGHMAKVLKEYFGEVRSSDAYAYGYA
PVRDYLDVPYEANAVDWVITNPPFRLAEEFVHRSLIVARVGVAVLVRTVFIESSGRYRALFEKNPPTKFAQFVERVPMVR
GRLDRKASTATGYAWLVWEKDEPTTSHLMWVPPCRKRFERDTDYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23337; Mature: 23337

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRSHAVMAQRAEASDSPDDFPTPPWATRGFMEYVIADKGPFSNMTALEPACGAGHMAK
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
VLKEYFGEVRSSDAYAYGYAPVRDYLDVPYEANAVDWVITNPPFRLAEEFVHRSLIVARV
HHHHHHHHHHCCCCEEECCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
GVAVLVRTVFIESSGRYRALFEKNPPTKFAQFVERVPMVRGRLDRKASTATGYAWLVWEK
HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC
DEPTTSHLMWVPPCRKRFERDTDYS
CCCCCCEEEECCHHHHHCCCCCCCC
>Mature Secondary Structure
MQNRSHAVMAQRAEASDSPDDFPTPPWATRGFMEYVIADKGPFSNMTALEPACGAGHMAK
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
VLKEYFGEVRSSDAYAYGYAPVRDYLDVPYEANAVDWVITNPPFRLAEEFVHRSLIVARV
HHHHHHHHHHCCCCEEECCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
GVAVLVRTVFIESSGRYRALFEKNPPTKFAQFVERVPMVRGRLDRKASTATGYAWLVWEK
HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC
DEPTTSHLMWVPPCRKRFERDTDYS
CCCCCCEEEECCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA