| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is nhaK [H]
Identifier: 86747645
GI number: 86747645
Start: 580156
End: 581775
Strand: Direct
Name: nhaK [H]
Synonym: RPB_0519
Alternate gene names: 86747645
Gene position: 580156-581775 (Clockwise)
Preceding gene: 86747642
Following gene: 86747646
Centisome position: 10.88
GC content: 69.07
Gene sequence:
>1620_bases GTGGGTCCGGTGGAAGCGAAGTTCCAGATTTTCCTGATCCTGCTCGCGGTGCTGGCGGCGACCGCGCTGCTGGCGCGCCG TCTTCACGTGGCCCCGGCGATCCTCTGGCTGCTGGTCGGCATCGTGCTGGCGTTCATCCCCGGCATGCCGGCGATCGAGC TGCCGCCGGACCTGATCCTGCTGCTGGTGCTGCCGCCGCTGATATATTCGGCGAGCGTGGCGATGAGCTGGCGTGAATTC CGCGCCAATCTGCGGTCGATCGGCCTGCTGGCGATCGGCTGCGTGATCTTCACCGCCGGCGCCGTCGCGGTGGCGACGCA CTATCTGCTCGGCCTACCATGGGCGGTCGGCTTCCTGCTCGGCGCCATCGTCGCGCCGCCCGACGTGGTGGCGCCGCTGG CGATCGCGCGCAGGCTCGGTCTGCCGCGGCGGATCGTGGTGGTGCTGGAGGGCGAGGGGCTCGCCAACGACGCCACCGCG CTGATCCTGTATCGCTTCGCGCTGGCCGCGATCATGACCGGGATGTTCTCTCTGCCGCAGGCGTCGGGTGCCTTCGTGGC GATTCTCGCCGGCGAAATCGGCTTCGGCATTGCGGTCGGCTGGCTCAGCCTGCGCGCCCGGCACTCCGCGCGCGATCCGC GGATCGAGATCACGCTGTCGCTGCTGACGCCCTACATCGCCTACTGGATTCCGGAGCATCTCGGCGGCTCCGGCGTGATC GCGACGGTGGCGTGCGGCCTCTACATCTCTTGGAACGGCCCGCTGCTGATCCCCGCGGCGACAAGGCTGCAGGGCATCTT CTTCTGGGACTTGATCATCTATCTGATCGAGGGGCTGCTGTTCCTGCTCACCGGCTTTCAGATGCGCGCGATCCTGGAGC GGTCGAAAGGGCTTCCGGTCGACGACATCGTGGTCGCGACGCTGCTGGTGGCGGCGATCGTCATCGTGGCGCGGTTTCTG TGGGTGTATCCGGCGACCTATCTGCCGCGCCTGCTGAGCAAGCGGATTCGCACGCGCGAACGGCGGCCGAGCTGGCGCGC GGTGTTCGTGGTCGGCTTCACCGGCGTGCGCGGTGCGGTGTCGCTCGCCACCGCGCTGGCGCTGCCGTTCGCGCTGCCGG ACGGCTCCGCCTTTCCCGATCGCGACCTGATCCTGTTCGTCGCCTTCGGCGTCATCCTGATCACGCTGGTCGGGCTCGGC CTGACGCTGCCGGCGCTGGTCGGCGTGCTCGGACTGACCCGCGACGGCCGCAGCGAGCACATCGCCGAACACGAAGCCGA GATCGCGGCGCGGCGCGCGGCGCTGGCGGCCGCGTTGCAATCGCTCGACGCGCTGACCAACGATCGCGCATTGTCCGACG AGGTGGTGGCGCTGCTGCATGCGCGGCACGACATCCGCGCCCATCAATTGCCGACGGCGCTCGACGACGCCGCCTATGCG GCGACCGCCAATGCGCGCGCGCTGGTCCGCGAACTCATCGCGGCGGAGCGGCAATTCATCCACGCCCAGCTCCGCGCCGG CAAGATCACCGACGAAGCGCGGCGACGGATCGAGCGCGACCTCGATCTGGAAGAGGCGAGTTTGGCGAACAGGGAGTTTC GGAGCGGAGGGCAGCGCTAA
Upstream 100 bases:
>100_bases TCGCCGCGAGCGCGGCGGCCGGCGGCGGCGAGGCGGTTCTCTTGACCTGCCCCGGCGGCCGGGCGATGCAGTCGGCGTCG GTCCTTCGACCGACGACATC
Downstream 100 bases:
>100_bases CTGCTAGTGCACCGGCTAGGATGCTCCATCTATTTGGTAGGCTGTCCAAACGACAAATATGTCGACGTGCAGCGAGCGAG TAGCTAACCTTGTTCCCGTT
Product: Na+/H+ antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 538
Protein sequence:
>539_residues MGPVEAKFQIFLILLAVLAATALLARRLHVAPAILWLLVGIVLAFIPGMPAIELPPDLILLLVLPPLIYSASVAMSWREF RANLRSIGLLAIGCVIFTAGAVAVATHYLLGLPWAVGFLLGAIVAPPDVVAPLAIARRLGLPRRIVVVLEGEGLANDATA LILYRFALAAIMTGMFSLPQASGAFVAILAGEIGFGIAVGWLSLRARHSARDPRIEITLSLLTPYIAYWIPEHLGGSGVI ATVACGLYISWNGPLLIPAATRLQGIFFWDLIIYLIEGLLFLLTGFQMRAILERSKGLPVDDIVVATLLVAAIVIVARFL WVYPATYLPRLLSKRIRTRERRPSWRAVFVVGFTGVRGAVSLATALALPFALPDGSAFPDRDLILFVAFGVILITLVGLG LTLPALVGVLGLTRDGRSEHIAEHEAEIAARRAALAAALQSLDALTNDRALSDEVVALLHARHDIRAHQLPTALDDAAYA ATANARALVRELIAAERQFIHAQLRAGKITDEARRRIERDLDLEEASLANREFRSGGQR
Sequences:
>Translated_539_residues MGPVEAKFQIFLILLAVLAATALLARRLHVAPAILWLLVGIVLAFIPGMPAIELPPDLILLLVLPPLIYSASVAMSWREF RANLRSIGLLAIGCVIFTAGAVAVATHYLLGLPWAVGFLLGAIVAPPDVVAPLAIARRLGLPRRIVVVLEGEGLANDATA LILYRFALAAIMTGMFSLPQASGAFVAILAGEIGFGIAVGWLSLRARHSARDPRIEITLSLLTPYIAYWIPEHLGGSGVI ATVACGLYISWNGPLLIPAATRLQGIFFWDLIIYLIEGLLFLLTGFQMRAILERSKGLPVDDIVVATLLVAAIVIVARFL WVYPATYLPRLLSKRIRTRERRPSWRAVFVVGFTGVRGAVSLATALALPFALPDGSAFPDRDLILFVAFGVILITLVGLG LTLPALVGVLGLTRDGRSEHIAEHEAEIAARRAALAAALQSLDALTNDRALSDEVVALLHARHDIRAHQLPTALDDAAYA ATANARALVRELIAAERQFIHAQLRAGKITDEARRRIERDLDLEEASLANREFRSGGQR >Mature_538_residues GPVEAKFQIFLILLAVLAATALLARRLHVAPAILWLLVGIVLAFIPGMPAIELPPDLILLLVLPPLIYSASVAMSWREFR ANLRSIGLLAIGCVIFTAGAVAVATHYLLGLPWAVGFLLGAIVAPPDVVAPLAIARRLGLPRRIVVVLEGEGLANDATAL ILYRFALAAIMTGMFSLPQASGAFVAILAGEIGFGIAVGWLSLRARHSARDPRIEITLSLLTPYIAYWIPEHLGGSGVIA TVACGLYISWNGPLLIPAATRLQGIFFWDLIIYLIEGLLFLLTGFQMRAILERSKGLPVDDIVVATLLVAAIVIVARFLW VYPATYLPRLLSKRIRTRERRPSWRAVFVVGFTGVRGAVSLATALALPFALPDGSAFPDRDLILFVAFGVILITLVGLGL TLPALVGVLGLTRDGRSEHIAEHEAEIAARRAALAAALQSLDALTNDRALSDEVVALLHARHDIRAHQLPTALDDAAYAA TANARALVRELIAAERQFIHAQLRAGKITDEARRRIERDLDLEEASLANREFRSGGQR
Specific function: Transporter involved in the efflux of sodium, potassium, lithium and rubidium [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. Nhak (TC 2.A.36.3.2) subfamily [H]
Homologues:
Organism=Homo sapiens, GI15529998, Length=446, Percent_Identity=24.6636771300448, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI41872703, Length=537, Percent_Identity=21.2290502793296, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI27734935, Length=364, Percent_Identity=21.7032967032967, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI148727259, Length=434, Percent_Identity=23.963133640553, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI14211919, Length=399, Percent_Identity=22.3057644110276, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI194239733, Length=386, Percent_Identity=24.3523316062176, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI294997330, Length=416, Percent_Identity=23.5576923076923, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI5454070, Length=440, Percent_Identity=22.7272727272727, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI110227626, Length=416, Percent_Identity=23.3173076923077, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI27777632, Length=465, Percent_Identity=25.1612903225806, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI1790501, Length=558, Percent_Identity=29.5698924731183, Blast_Score=178, Evalue=7e-46, Organism=Caenorhabditis elegans, GI25147678, Length=467, Percent_Identity=22.4839400428266, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71980847, Length=395, Percent_Identity=25.0632911392405, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71992107, Length=333, Percent_Identity=20.7207207207207, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71992101, Length=333, Percent_Identity=20.7207207207207, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI25150332, Length=404, Percent_Identity=22.029702970297, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71993590, Length=390, Percent_Identity=24.8717948717949, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71993582, Length=390, Percent_Identity=24.8717948717949, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71990932, Length=393, Percent_Identity=24.9363867684478, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71987559, Length=457, Percent_Identity=21.6630196936543, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71987545, Length=457, Percent_Identity=21.6630196936543, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71990924, Length=393, Percent_Identity=24.9363867684478, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71987535, Length=406, Percent_Identity=21.6748768472906, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71987537, Length=406, Percent_Identity=21.6748768472906, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320663, Length=403, Percent_Identity=22.5806451612903, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI281360447, Length=494, Percent_Identity=22.2672064777328, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI221510734, Length=382, Percent_Identity=23.2984293193717, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI221510738, Length=382, Percent_Identity=23.2984293193717, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI221473212, Length=337, Percent_Identity=25.2225519287834, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI281364513, Length=337, Percent_Identity=25.2225519287834, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI221473215, Length=337, Percent_Identity=25.2225519287834, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI221473222, Length=337, Percent_Identity=25.2225519287834, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI221510732, Length=379, Percent_Identity=23.4828496042216, Blast_Score=69, Evalue=9e-12, Organism=Drosophila melanogaster, GI221510736, Length=379, Percent_Identity=23.4828496042216, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24585580, Length=379, Percent_Identity=23.4828496042216, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24585578, Length=379, Percent_Identity=23.4828496042216, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI221510740, Length=379, Percent_Identity=23.4828496042216, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR018422 - InterPro: IPR018417 - InterPro: IPR004705 - InterPro: IPR002014 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 58122; Mature: 57990
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPVEAKFQIFLILLAVLAATALLARRLHVAPAILWLLVGIVLAFIPGMPAIELPPDLIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LLVLPPLIYSASVAMSWREFRANLRSIGLLAIGCVIFTAGAVAVATHYLLGLPWAVGFLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAIVAPPDVVAPLAIARRLGLPRRIVVVLEGEGLANDATALILYRFALAAIMTGMFSLPQ HHHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC ASGAFVAILAGEIGFGIAVGWLSLRARHSARDPRIEITLSLLTPYIAYWIPEHLGGSGVI CCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHH ATVACGLYISWNGPLLIPAATRLQGIFFWDLIIYLIEGLLFLLTGFQMRAILERSKGLPV HHHHCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH DDIVVATLLVAAIVIVARFLWVYPATYLPRLLSKRIRTRERRPSWRAVFVVGFTGVRGAV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHH SLATALALPFALPDGSAFPDRDLILFVAFGVILITLVGLGLTLPALVGVLGLTRDGRSEH HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IAEHEAEIAARRAALAAALQSLDALTNDRALSDEVVALLHARHDIRAHQLPTALDDAAYA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ATANARALVRELIAAERQFIHAQLRAGKITDEARRRIERDLDLEEASLANREFRSGGQR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure GPVEAKFQIFLILLAVLAATALLARRLHVAPAILWLLVGIVLAFIPGMPAIELPPDLIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LLVLPPLIYSASVAMSWREFRANLRSIGLLAIGCVIFTAGAVAVATHYLLGLPWAVGFLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAIVAPPDVVAPLAIARRLGLPRRIVVVLEGEGLANDATALILYRFALAAIMTGMFSLPQ HHHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC ASGAFVAILAGEIGFGIAVGWLSLRARHSARDPRIEITLSLLTPYIAYWIPEHLGGSGVI CCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHH ATVACGLYISWNGPLLIPAATRLQGIFFWDLIIYLIEGLLFLLTGFQMRAILERSKGLPV HHHHCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH DDIVVATLLVAAIVIVARFLWVYPATYLPRLLSKRIRTRERRPSWRAVFVVGFTGVRGAV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHH SLATALALPFALPDGSAFPDRDLILFVAFGVILITLVGLGLTLPALVGVLGLTRDGRSEH HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IAEHEAEIAARRAALAAALQSLDALTNDRALSDEVVALLHARHDIRAHQLPTALDDAAYA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ATANARALVRELIAAERQFIHAQLRAGKITDEARRRIERDLDLEEASLANREFRSGGQR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA