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The map label for this gene is 86747605

Identifier: 86747605

GI number: 86747605

Start: 527607

End: 528389

Strand: Direct

Name: 86747605

Synonym: RPB_0479

Alternate gene names: NA

Gene position: 527607-528389 (Clockwise)

Preceding gene: 86747604

Following gene: 86747606

Centisome position: 9.9

GC content: 66.67

Gene sequence:

>783_bases
GTGTCCCGCCAGCACGTGCCTGATGACAGGAGGGGCGGGGCCACCAGATCGCTCATGGCCCGTTTGGCGGCTTTGGGATC
CAAGCCTCGAAGCCGACTTGGTTTCGCGGCTTCGGCCACCGTAGCCACCATAGCGGGTACATGGGTGGCAAGCCTGGAGC
TGGTGAAGGCTGCTTCCGCACCGAGCACTCCCTCGATCATTGCTTTCGACATTGCGGCACAGCCGCTGAGTTCGGCGCTC
GACGCGTTCAGCGCGGTCACCGGACTTCAGCTCGTCTATGATGGGGCTTTGGCGCAAGGCCGCCGCTCGAATGCAGTCTT
TGGCACGATGTCTCCGCAAGAGGCGCTCCGCGGACTGCTGGCGGGTTCCGGTCTCATGCCGGTGCGCGGCTCTGATGCGT
TCACGGTGATTCCTTCGGACGCCGCAGGCCCCCCCAAGCAGACGCTTGCCGGTTTGATGCCTTATCTCGGCGCCATGCAG
GCCAGCCTTGCGAGCGCCTTTTGCCGTTTACCGGAGACGCGGCCCGGCAGCTATGCCACCACGCTCGAATTCTGGATCGG
CCCGAGCGGACAGATCCTGAAGCCGCATCTGTTCGGCTCGACCGATCCGGCGCGCGACCAGGCGATCGTGCGGTTGCTCG
GCGACCTGTCGATCCAGCATCCGCCGCCGGATTTGCCGCAGCCGATTATCATCGCCATCGGCTCTCGCCCGCCGGCCGAG
ACCGGCGATTGCGCGCCGGAGCGGGGTGGCGCGCCGGCGCAGGCTCGGGCGCGCCATGACTGA

Upstream 100 bases:

>100_bases
GGGATTGTCCGACGCGCGGCTGTCATAAAGCATTCTTATATTGTGGCGATAAGCTCTACAGTATCGTCCAAATCGTCCGA
TTTCGAGATGTGGGTCTGCT

Downstream 100 bases:

>100_bases
GGCGAGCTGGACCGTGCTCCGCGAGGTGCTGGCGGAGCGCTATGACGAATTGTGCCGGCGGCTCGCTGTCCGTCTCGGTT
CGAAAGAAGCCGCGCGCGAG

Product: secretin/TonB, short-like protein

Products: NA

Alternate protein names: Secretin/nB Short N-Terminal Domain-Containing Protein; NB Family Protein; NB-Ferrisiderophore Receptor Protein; Secretin/nB-Like Protein; Secretin/nB Short-Like; NB-Dependent Siderophore Receptor; NB Dependent Family Protein

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSRQHVPDDRRGGATRSLMARLAALGSKPRSRLGFAASATVATIAGTWVASLELVKAASAPSTPSIIAFDIAAQPLSSAL
DAFSAVTGLQLVYDGALAQGRRSNAVFGTMSPQEALRGLLAGSGLMPVRGSDAFTVIPSDAAGPPKQTLAGLMPYLGAMQ
ASLASAFCRLPETRPGSYATTLEFWIGPSGQILKPHLFGSTDPARDQAIVRLLGDLSIQHPPPDLPQPIIIAIGSRPPAE
TGDCAPERGGAPAQARARHD

Sequences:

>Translated_260_residues
MSRQHVPDDRRGGATRSLMARLAALGSKPRSRLGFAASATVATIAGTWVASLELVKAASAPSTPSIIAFDIAAQPLSSAL
DAFSAVTGLQLVYDGALAQGRRSNAVFGTMSPQEALRGLLAGSGLMPVRGSDAFTVIPSDAAGPPKQTLAGLMPYLGAMQ
ASLASAFCRLPETRPGSYATTLEFWIGPSGQILKPHLFGSTDPARDQAIVRLLGDLSIQHPPPDLPQPIIIAIGSRPPAE
TGDCAPERGGAPAQARARHD
>Mature_259_residues
SRQHVPDDRRGGATRSLMARLAALGSKPRSRLGFAASATVATIAGTWVASLELVKAASAPSTPSIIAFDIAAQPLSSALD
AFSAVTGLQLVYDGALAQGRRSNAVFGTMSPQEALRGLLAGSGLMPVRGSDAFTVIPSDAAGPPKQTLAGLMPYLGAMQA
SLASAFCRLPETRPGSYATTLEFWIGPSGQILKPHLFGSTDPARDQAIVRLLGDLSIQHPPPDLPQPIIIAIGSRPPAET
GDCAPERGGAPAQARARHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26865; Mature: 26734

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQHVPDDRRGGATRSLMARLAALGSKPRSRLGFAASATVATIAGTWVASLELVKAASA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PSTPSIIAFDIAAQPLSSALDAFSAVTGLQLVYDGALAQGRRSNAVFGTMSPQEALRGLL
CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHH
AGSGLMPVRGSDAFTVIPSDAAGPPKQTLAGLMPYLGAMQASLASAFCRLPETRPGSYAT
HCCCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
TLEFWIGPSGQILKPHLFGSTDPARDQAIVRLLGDLSIQHPPPDLPQPIIIAIGSRPPAE
EEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
TGDCAPERGGAPAQARARHD
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRQHVPDDRRGGATRSLMARLAALGSKPRSRLGFAASATVATIAGTWVASLELVKAASA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PSTPSIIAFDIAAQPLSSALDAFSAVTGLQLVYDGALAQGRRSNAVFGTMSPQEALRGLL
CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHH
AGSGLMPVRGSDAFTVIPSDAAGPPKQTLAGLMPYLGAMQASLASAFCRLPETRPGSYAT
HCCCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
TLEFWIGPSGQILKPHLFGSTDPARDQAIVRLLGDLSIQHPPPDLPQPIIIAIGSRPPAE
EEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
TGDCAPERGGAPAQARARHD
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA