| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747584
Identifier: 86747584
GI number: 86747584
Start: 504642
End: 505445
Strand: Direct
Name: 86747584
Synonym: RPB_0458
Alternate gene names: NA
Gene position: 504642-505445 (Clockwise)
Preceding gene: 86747581
Following gene: 86747585
Centisome position: 9.47
GC content: 70.65
Gene sequence:
>804_bases ATGCTGACGGGAATCACCTCCGCCGACCTCATCACCGTCGCCAGCGGCGGGCTGGTCGGGTTCATTCTGGCGCTGATCGG CGGCGGCGGCTCGGTGCTGGCGGTGCCGCTGCTGGTCTATGTGGTCGGCGTGCGCTCGCCGCATGTGGCGATCGGCACCA GCGCGATCGCGGTGGCGATCTCGGCGCTCGCCAACATGCTGAGCCACTGGGCCGCCGGCCATGTGCGCTGGGCTTGCGCG CTGGTGTTCTCCGCGGCCGGGATCGGCGGCGCGTTCGCCGGCTCCAGCGTCGCCAAGCAGATCGACGGCCAGCAATTGCT GGTGCTGTTCGGCGTCCTGATGATCGTGATCGGGGTGCTGATGTCGCGCGGCCGCGCCGGCGGCGGCGACCCGACCATCC GGCTGACGATGGCGACCGCGAAGGCGATGCTGCCGAAGCTGATCGGCACCGGCTTCGGCGTCGGCGTGCTCGCCGGCTTC TTCGGCATCGGCGGCGGCTTCCTGATCGTGCCCGGGCTGATCCTCGCCACCGGCATGCCGCTGACTTACGCGATCGGCAG CTCGCTGGTCGCGGTGTTCGCGTTCGGCGCGTCCACCGCGGCGAGCTACGCGCTGTCCGGACTGATCGACTGGCGGCTCG CCGGCTTCTTCATCGGCGGTGGCCTCGCCGGCGGCCTGATCGGCATCGGCGCCGGCAAACTGATCGGCACCCACGACAAG GCGCTGCGCGCGGTGTTCTCCGCCGTCGTGGTGATCGTCGGGCTGTATGTCTGCGCCCGCGGCGTGATGGTCTTCCTGTC CTGA
Upstream 100 bases:
>100_bases TGGTCACGAGCAATTTCCCTGATCCGGTAGAATGGCTGTTGCGCCCCAAGCCTATCTATTAGCATATCCCACCCGTGCAA GCGCCGATTTGTAGAATTTC
Downstream 100 bases:
>100_bases TACCAAGCGGCGGTCTTGCGACCGTCATCGATGCGGCTCAAGGGCTTTTCCGGTTCTGATCGAATCAGAACCGGAGCTCC AGATTCTTGATTTGACGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MLTGITSADLITVASGGLVGFILALIGGGGSVLAVPLLVYVVGVRSPHVAIGTSAIAVAISALANMLSHWAAGHVRWACA LVFSAAGIGGAFAGSSVAKQIDGQQLLVLFGVLMIVIGVLMSRGRAGGGDPTIRLTMATAKAMLPKLIGTGFGVGVLAGF FGIGGGFLIVPGLILATGMPLTYAIGSSLVAVFAFGASTAASYALSGLIDWRLAGFFIGGGLAGGLIGIGAGKLIGTHDK ALRAVFSAVVVIVGLYVCARGVMVFLS
Sequences:
>Translated_267_residues MLTGITSADLITVASGGLVGFILALIGGGGSVLAVPLLVYVVGVRSPHVAIGTSAIAVAISALANMLSHWAAGHVRWACA LVFSAAGIGGAFAGSSVAKQIDGQQLLVLFGVLMIVIGVLMSRGRAGGGDPTIRLTMATAKAMLPKLIGTGFGVGVLAGF FGIGGGFLIVPGLILATGMPLTYAIGSSLVAVFAFGASTAASYALSGLIDWRLAGFFIGGGLAGGLIGIGAGKLIGTHDK ALRAVFSAVVVIVGLYVCARGVMVFLS >Mature_267_residues MLTGITSADLITVASGGLVGFILALIGGGGSVLAVPLLVYVVGVRSPHVAIGTSAIAVAISALANMLSHWAAGHVRWACA LVFSAAGIGGAFAGSSVAKQIDGQQLLVLFGVLMIVIGVLMSRGRAGGGDPTIRLTMATAKAMLPKLIGTGFGVGVLAGF FGIGGGFLIVPGLILATGMPLTYAIGSSLVAVFAFGASTAASYALSGLIDWRLAGFFIGGGLAGGLIGIGAGKLIGTHDK ALRAVFSAVVVIVGLYVCARGVMVFLS
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 26357; Mature: 26357
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGITSADLITVASGGLVGFILALIGGGGSVLAVPLLVYVVGVRSPHVAIGTSAIAVAI CCCCCCCCCHHEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH SALANMLSHWAAGHVRWACALVFSAAGIGGAFAGSSVAKQIDGQQLLVLFGVLMIVIGVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHCCCHHHHHHHHHHHHHHHHH MSRGRAGGGDPTIRLTMATAKAMLPKLIGTGFGVGVLAGFFGIGGGFLIVPGLILATGMP HHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC LTYAIGSSLVAVFAFGASTAASYALSGLIDWRLAGFFIGGGLAGGLIGIGAGKLIGTHDK HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEECCHHH ALRAVFSAVVVIVGLYVCARGVMVFLS HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLTGITSADLITVASGGLVGFILALIGGGGSVLAVPLLVYVVGVRSPHVAIGTSAIAVAI CCCCCCCCCHHEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH SALANMLSHWAAGHVRWACALVFSAAGIGGAFAGSSVAKQIDGQQLLVLFGVLMIVIGVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHCCCHHHHHHHHHHHHHHHHH MSRGRAGGGDPTIRLTMATAKAMLPKLIGTGFGVGVLAGFFGIGGGFLIVPGLILATGMP HHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC LTYAIGSSLVAVFAFGASTAASYALSGLIDWRLAGFFIGGGLAGGLIGIGAGKLIGTHDK HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEECCHHH ALRAVFSAVVVIVGLYVCARGVMVFLS HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]