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The map label for this gene is lrp [H]

Identifier: 86747575

GI number: 86747575

Start: 495145

End: 495615

Strand: Reverse

Name: lrp [H]

Synonym: RPB_0449

Alternate gene names: 86747575

Gene position: 495615-495145 (Counterclockwise)

Preceding gene: 86747578

Following gene: 86747573

Centisome position: 9.3

GC content: 71.34

Gene sequence:

>471_bases
ATGAGCCTCGACGCGATCGACCTCAAGATCCTGGCCGAGCTGCAGGCCGACGCCCGGATTCCGAACCTCACGCTGGCCGA
GCGGGTCGGGCTGTCGCCGTCGCCCTGTTCGCGGCGGGTCCGGCTGCTGGAACAGGCGGGCGTGGTGGCGGGCTATCGGG
CGCTGATCGATCGCGCCGCGGTCGGGCTGTCGGTCACCGCCTTCGCGGGCATCCGGGTCGAGCGGCATTCGCGCGACAAT
GCCGAGGCGTTCATCGCCGCGGTGCGCGACATGCCGGAGGTCATCGCCTGCCATCTGGTCTCGGGCGACGCCGATTTCCT
GCTCGAAGTGGTGGTGCCGGATATCGCCGCCTACGAGGCCACCGTGCTGCGCGGCCTGCTGGCGCTGCCGACGGTGCGCG
ACATCCGCACCTCGTTCGCGATGCGCAGCGACAAGCTCGACGGCCCGCTGCCGCTGCCGAAGCCGGCGTAG

Upstream 100 bases:

>100_bases
CGTGAGTCCGCCTGCCAATGTTGCCAAAGATGCTACTATGGAGTTACAAATTGGCGATATCTGGCAATTTGCTGCGCAAC
AGATGGATAATCCTGCCAAG

Downstream 100 bases:

>100_bases
CGCCGCGGCTCAGCCCGGCAGATGCTCGCGCACCCAGCGCACGATCGCGCTGGCCGGCATCGCGCCGGAGGTGCGGGCGC
GTTCGCGGCCGTCCGCGAAC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSLDAIDLKILAELQADARIPNLTLAERVGLSPSPCSRRVRLLEQAGVVAGYRALIDRAAVGLSVTAFAGIRVERHSRDN
AEAFIAAVRDMPEVIACHLVSGDADFLLEVVVPDIAAYEATVLRGLLALPTVRDIRTSFAMRSDKLDGPLPLPKPA

Sequences:

>Translated_156_residues
MSLDAIDLKILAELQADARIPNLTLAERVGLSPSPCSRRVRLLEQAGVVAGYRALIDRAAVGLSVTAFAGIRVERHSRDN
AEAFIAAVRDMPEVIACHLVSGDADFLLEVVVPDIAAYEATVLRGLLALPTVRDIRTSFAMRSDKLDGPLPLPKPA
>Mature_155_residues
SLDAIDLKILAELQADARIPNLTLAERVGLSPSPCSRRVRLLEQAGVVAGYRALIDRAAVGLSVTAFAGIRVERHSRDNA
EAFIAAVRDMPEVIACHLVSGDADFLLEVVVPDIAAYEATVLRGLLALPTVRDIRTSFAMRSDKLDGPLPLPKPA

Specific function: Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different operons; lrp mediates this effect for at least some of these operons. For example it is regulator of the branched-chain amino acid transport genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=143, Percent_Identity=46.8531468531469, Blast_Score=127, Evalue=3e-31,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=37.3333333333333, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 16738; Mature: 16606

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDAIDLKILAELQADARIPNLTLAERVGLSPSPCSRRVRLLEQAGVVAGYRALIDRAA
CCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHH
VGLSVTAFAGIRVERHSRDNAEAFIAAVRDMPEVIACHLVSGDADFLLEVVVPDIAAYEA
HCCCHHHHHCEEEECCCCCCHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCHHHHHH
TVLRGLLALPTVRDIRTSFAMRSDKLDGPLPLPKPA
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLDAIDLKILAELQADARIPNLTLAERVGLSPSPCSRRVRLLEQAGVVAGYRALIDRAA
CCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHH
VGLSVTAFAGIRVERHSRDNAEAFIAAVRDMPEVIACHLVSGDADFLLEVVVPDIAAYEA
HCCCHHHHHCEEEECCCCCCHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCHHHHHH
TVLRGLLALPTVRDIRTSFAMRSDKLDGPLPLPKPA
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]