| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is tesA [H]
Identifier: 86747410
GI number: 86747410
Start: 320974
End: 321582
Strand: Reverse
Name: tesA [H]
Synonym: RPB_0284
Alternate gene names: 86747410
Gene position: 321582-320974 (Counterclockwise)
Preceding gene: 86747415
Following gene: 86747409
Centisome position: 6.03
GC content: 66.67
Gene sequence:
>609_bases ATGGCGCCGACCCGGCAGGCCGAGGCGCAGACGGCCGCCAAGCCGCTGAAGGTGGTGGTGCTGGGTGACTCGCTGTCCGC CGGTTATGGACTACCGGCCAATGCAGCGTTTCCGGCCAAGCTGCAGAAAGCGCTGCAGGCCAAGGGGATCGCGACCGACA TGATCAATGCCGGGGTGTCGGGCGACACCGCCAGCGGCGGGCTCGCCCGGCTCGACTGGTCGGTGCCGCCGGACACCGAT GCGGTGATCGTCGAGCTCGGTGCCAACGACGCGCTGCGCGGCACCGATCCCAAGGTCCCGCAACAGGCGCTGGACGAGAT CGTCAAACGGCTGAAAGCGCGCAACATCGCGGTGCTGCTCACCGGAATGCTGGCGCCGCCGAATTACGGGCCGGACTACG CCAAACAGTTCAACGCGATCTATCCCGATCTGGCGAAAAAATACGACGTGCCGCTGTACCCGTTCTTCCTCGACGGCGTC GCCGCGGTGGCCGGCCTCAATCAGCCGGACGGCATCCACCCGACCGCAGCGGGCATCGACCTGGTGGTCGCCAACATCCT GCCCACAGTGGAGGCATTTCTGCGATCGGTCGCTGGGCAGAAAGGCTGA
Upstream 100 bases:
>100_bases GCTGTCCATGGCTGCTGCATATGGCGATTGTTTCGGTGCGGTCGAGAGGGCGGGGCGCACGATTGCGTGGGCGATGGTGA CCGCCGTGTTGGTGGTGACC
Downstream 100 bases:
>100_bases AAATCCCGGCAATTCCCCTCTAAGGGGCGGATTGCCCTCAACTTTTTCGCTATCCCAGCGTTGTAGCGGTAGCGCTGTAA CATAAACGCGCTACAGAATT
Product: lipolytic protein
Products: NA
Alternate protein names: Lecithinase B; Lysophospholipase L1; Protease I [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MAPTRQAEAQTAAKPLKVVVLGDSLSAGYGLPANAAFPAKLQKALQAKGIATDMINAGVSGDTASGGLARLDWSVPPDTD AVIVELGANDALRGTDPKVPQQALDEIVKRLKARNIAVLLTGMLAPPNYGPDYAKQFNAIYPDLAKKYDVPLYPFFLDGV AAVAGLNQPDGIHPTAAGIDLVVANILPTVEAFLRSVAGQKG
Sequences:
>Translated_202_residues MAPTRQAEAQTAAKPLKVVVLGDSLSAGYGLPANAAFPAKLQKALQAKGIATDMINAGVSGDTASGGLARLDWSVPPDTD AVIVELGANDALRGTDPKVPQQALDEIVKRLKARNIAVLLTGMLAPPNYGPDYAKQFNAIYPDLAKKYDVPLYPFFLDGV AAVAGLNQPDGIHPTAAGIDLVVANILPTVEAFLRSVAGQKG >Mature_201_residues APTRQAEAQTAAKPLKVVVLGDSLSAGYGLPANAAFPAKLQKALQAKGIATDMINAGVSGDTASGGLARLDWSVPPDTDA VIVELGANDALRGTDPKVPQQALDEIVKRLKARNIAVLLTGMLAPPNYGPDYAKQFNAIYPDLAKKYDVPLYPFFLDGVA AVAGLNQPDGIHPTAAGIDLVVANILPTVEAFLRSVAGQKG
Specific function: Hydrolyzes only long chain acyl thioesters (C12-C18). Specificity similar to chymotrypsin [H]
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786702, Length=159, Percent_Identity=47.1698113207547, Blast_Score=135, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001087 - InterPro: IPR008265 [H]
Pfam domain/function: PF00657 Lipase_GDSL [H]
EC number: =3.1.1.5 [H]
Molecular weight: Translated: 20954; Mature: 20823
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTRQAEAQTAAKPLKVVVLGDSLSAGYGLPANAAFPAKLQKALQAKGIATDMINAGVS CCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCC GDTASGGLARLDWSVPPDTDAVIVELGANDALRGTDPKVPQQALDEIVKRLKARNIAVLL CCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE TGMLAPPNYGPDYAKQFNAIYPDLAKKYDVPLYPFFLDGVAAVAGLNQPDGIHPTAAGID EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH LVVANILPTVEAFLRSVAGQKG HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure APTRQAEAQTAAKPLKVVVLGDSLSAGYGLPANAAFPAKLQKALQAKGIATDMINAGVS CCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCC GDTASGGLARLDWSVPPDTDAVIVELGANDALRGTDPKVPQQALDEIVKRLKARNIAVLL CCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE TGMLAPPNYGPDYAKQFNAIYPDLAKKYDVPLYPFFLDGVAAVAGLNQPDGIHPTAAGID EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH LVVANILPTVEAFLRSVAGQKG HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]