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The map label for this gene is 86747364

Identifier: 86747364

GI number: 86747364

Start: 271551

End: 272387

Strand: Reverse

Name: 86747364

Synonym: RPB_0238

Alternate gene names: NA

Gene position: 272387-271551 (Counterclockwise)

Preceding gene: 86747365

Following gene: 86747363

Centisome position: 5.11

GC content: 68.94

Gene sequence:

>837_bases
GTGACGCCCGACAGCGATCCGGCGGGAAGCGGCCGCAGCTCCGCGCGGCGACCGTCGTTGTGGCTCACGATCCCTGCCGT
TGCGGCCGTGGCCGGACTGATCGCGCTCGGCGTCTGGCAGATCGAGCGGCGTGCCTGGAAACTGGCCCTGATCGACCGCG
TCGAGCAGCGCGCGCATGCTGCACCGACTGCGTTGCCCCCCGCCGCGTCCTGGCCCGAAGTGACCGCCGCCCGCGACGAA
TATCGGCGCGTCACCGTGACCGGCCGCTTCCTGCACGACCGCGAGACGCTGGTGCAGGCGGTCACCGATTTCGGCGGCGG
CTTCTGGGCGATCACGCCGCTGCGCACCGACGACGGCCGCAACGTGCTGATCAATCGCGGCTTCGTTCCGCCCGACTGGC
GAGATCGGGCGACGCGCAGCGCCGGCGCGCCTGCCGGCGAGATCACGGTTAACGGTCTGTTGCGCGTGACGGAACCCGGC
GGTGGCTTCCTGCGGCACAACGAGCCCGCCGCCGATCGCTGGTATTCACGCGACGTCGCGGCGATCGCACAGACGCGAAG
CGTCGCGAATGTCGCACCTTTCTTCATCGACGCCGACGCATCGTTCAACCTGGAAGGGCAGCCGATCGGTGGCCTGACCG
TGATTCGGTTCCCCAACAACCACCTGGTCTACGCGCTCACGTGGTTTTGCCTGGCATTTATGCTGGCCGGCTGGCTTGTT
GTCGCCTTCGGTGCCGGGTCATTCCGCCGCGCAGGCGGTGGCCGGAGGCCGGGCCAAGAGGCGCAATCCGCCCTTGCAAC
AGGATCACATGCTGGACCGATCTCCGGGCACCGTTGA

Upstream 100 bases:

>100_bases
GTGGTGATCGCGCTGGCCGGTTCGCTGTGGGTGATGCACCATCTGACCACCAACATGATGCCGGCTCACGACATGATCCG
GCGGTGAGGACAGCGCGATC

Downstream 100 bases:

>100_bases
CGACAAGGCCGGCTGGAGGTCGCGACAAGACATGTCGGCGTCCACATTCGTGCCGCGCCTCGGTGACGTGACTCCGGGCG
ACGATGCGACCGACCGCAAG

Product: Surfeit protein

Products: NA

Alternate protein names: SurF1 Family Protein; Surf1 Family Protein; SURF1 Family Protein; Surfeit Locus; Surfeit 1 Protein; Surfeit Protein; SURF1 Family; Cytochrome Oxidase Complex Biogenesis Factor Protein; SURF1 Protein; Transmembrane Cytochrome Oxidase Complex Biogenesis Protein; SUR1-Like Protein; Cytochrome C Oxidase Assembly Protein; Cytochrome C Oxidase Assembly; Surfeit Locus Protein; Surf1-Like Function; SURF-1 Protein; Surf1 Protein; Exported SurF1-Family Protein; Cytochrome C Oxidase Complex Biogenesis Factor Protein; Transmembrane Cytochrome Oxidase Biogenesis Protein

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTPDSDPAGSGRSSARRPSLWLTIPAVAAVAGLIALGVWQIERRAWKLALIDRVEQRAHAAPTALPPAASWPEVTAARDE
YRRVTVTGRFLHDRETLVQAVTDFGGGFWAITPLRTDDGRNVLINRGFVPPDWRDRATRSAGAPAGEITVNGLLRVTEPG
GGFLRHNEPAADRWYSRDVAAIAQTRSVANVAPFFIDADASFNLEGQPIGGLTVIRFPNNHLVYALTWFCLAFMLAGWLV
VAFGAGSFRRAGGGRRPGQEAQSALATGSHAGPISGHR

Sequences:

>Translated_278_residues
MTPDSDPAGSGRSSARRPSLWLTIPAVAAVAGLIALGVWQIERRAWKLALIDRVEQRAHAAPTALPPAASWPEVTAARDE
YRRVTVTGRFLHDRETLVQAVTDFGGGFWAITPLRTDDGRNVLINRGFVPPDWRDRATRSAGAPAGEITVNGLLRVTEPG
GGFLRHNEPAADRWYSRDVAAIAQTRSVANVAPFFIDADASFNLEGQPIGGLTVIRFPNNHLVYALTWFCLAFMLAGWLV
VAFGAGSFRRAGGGRRPGQEAQSALATGSHAGPISGHR
>Mature_277_residues
TPDSDPAGSGRSSARRPSLWLTIPAVAAVAGLIALGVWQIERRAWKLALIDRVEQRAHAAPTALPPAASWPEVTAARDEY
RRVTVTGRFLHDRETLVQAVTDFGGGFWAITPLRTDDGRNVLINRGFVPPDWRDRATRSAGAPAGEITVNGLLRVTEPGG
GFLRHNEPAADRWYSRDVAAIAQTRSVANVAPFFIDADASFNLEGQPIGGLTVIRFPNNHLVYALTWFCLAFMLAGWLVV
AFGAGSFRRAGGGRRPGQEAQSALATGSHAGPISGHR

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4507319, Length=228, Percent_Identity=36.4035087719298, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17553856, Length=238, Percent_Identity=33.6134453781513, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI17864366, Length=230, Percent_Identity=30.8695652173913, Blast_Score=94, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29908; Mature: 29777

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDSDPAGSGRSSARRPSLWLTIPAVAAVAGLIALGVWQIERRAWKLALIDRVEQRAHA
CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APTALPPAASWPEVTAARDEYRRVTVTGRFLHDRETLVQAVTDFGGGFWAITPLRTDDGR
CCCCCCCCCCCCCHHHCHHHCEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
NVLINRGFVPPDWRDRATRSAGAPAGEITVNGLLRVTEPGGGFLRHNEPAADRWYSRDVA
EEEEECCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
AIAQTRSVANVAPFFIDADASFNLEGQPIGGLTVIRFPNNHLVYALTWFCLAFMLAGWLV
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHH
VAFGAGSFRRAGGGRRPGQEAQSALATGSHAGPISGHR
HHHCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TPDSDPAGSGRSSARRPSLWLTIPAVAAVAGLIALGVWQIERRAWKLALIDRVEQRAHA
CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APTALPPAASWPEVTAARDEYRRVTVTGRFLHDRETLVQAVTDFGGGFWAITPLRTDDGR
CCCCCCCCCCCCCHHHCHHHCEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
NVLINRGFVPPDWRDRATRSAGAPAGEITVNGLLRVTEPGGGFLRHNEPAADRWYSRDVA
EEEEECCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
AIAQTRSVANVAPFFIDADASFNLEGQPIGGLTVIRFPNNHLVYALTWFCLAFMLAGWLV
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHH
VAFGAGSFRRAGGGRRPGQEAQSALATGSHAGPISGHR
HHHCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA