| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is guaC [H]
Identifier: 86747343
GI number: 86747343
Start: 245119
End: 246162
Strand: Reverse
Name: guaC [H]
Synonym: RPB_0217
Alternate gene names: 86747343
Gene position: 246162-245119 (Counterclockwise)
Preceding gene: 86747345
Following gene: 86747342
Centisome position: 4.62
GC content: 66.19
Gene sequence:
>1044_bases GTGCATATCGACCTCAATCCGAAGCTGGACTTCCGCGACGTTCTGATCCGGCCGAAGCGCTCCGTGCTGTCGTCGCGGTT CGAAGCCAATATCAGCCGCAGCTTCCGGTTTCGCCATTCCAGCCAGGCGTGGACCGGCTTCCCGCTGATCGCCTCCAACA TGGATACGGTCGGGACCATCGAGATGGCCGAAGCGTTCCGGCCGTTCGGGGCGCTGGTCGCGCTGCACAAGTTCTACGAT CCGGAGCGGCTCGCTCAGTATCTCGATCGCCATGAGAATCCCAACGTGTTTCTCACTGTCGGCACCGGCGCCGCCGACTG GGAGCGGCTCGCCGCTGTCAAGGCGCAGACCCGGGTGCCGATGCTGAACATCGACGTCGCCAACGGCTACACCGAGAATT TCGTCCGGGCGGTGGGGAAGCTGCGCGACGAGAATCCCGACGCGATCATCATGGCCGGCACGGTGGTGACGGCGGAGATG ACCGAGGCGCTGGTGATCGCCGGCGCCGACATCGTCCGCGTCGGCATCGGCTCGGGCTCGGTGTGTACCACGCGCGATCT CACCGGCGTCGGCTATCCGCAGCTCTCGGCCGTGATCGAATGCGCCGACGCCGCGCACGGCCTCAAGGGCCACGTCTGCT CCGACGGCGGCTGCACCGTGCCGGGCGACATCGCCAAGGCGTATGGCGGCGGCGCCGATTTCGTGATGCTCGGCGGCATG CTCGCGGGCCACGCCGAATGCGGCGGCGAGCTGCAATATGTCGAGGAGGACGGCCGGCAGGTGCCGAAGAGCATGACGTT CTACGGCATGTCGTCCGAAACCGCGATGAACAAGTATCACGGCGGCGTCGCCGATTATCGCGCAGCGGAAGGCAAGACCG TCGCGGTGCCGTATCGTGGCGAGGTGCGGGCGACGGTGGAGACCATCGCGGGCGGGCTGCGCTCGGCGATGACCTATATG GGCGCGGAGAATCTCAAGGAGGTGCCGAAGCGGACCACCTTCATCCTGGTCAACGCCCAGCGCAACACCGTGTTCGATCG CTGA
Upstream 100 bases:
>100_bases GTCTCGGCGCAGGCGACGATTTGCGCATTGCGAGCGCGAACCAATGCGCAACCAATGCTTCTTATAGTGGCCGCCCACCG ACGCAACCGAGGATCCGCGC
Downstream 100 bases:
>100_bases TCCCGCGCGATTTGCCGCGGCTCGGAATTCGCGGCGCGCGTGTCAGGGTTGCGCTTGCCTGCGCGGCCGCAAATGGCATG GTGCGGCGACGCGCGACGCT
Product: guanosine 5'-monophosphate oxidoreductase
Products: NA
Alternate protein names: Guanosine 5'-monophosphate oxidoreductase; Guanosine monophosphate reductase [H]
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MHIDLNPKLDFRDVLIRPKRSVLSSRFEANISRSFRFRHSSQAWTGFPLIASNMDTVGTIEMAEAFRPFGALVALHKFYD PERLAQYLDRHENPNVFLTVGTGAADWERLAAVKAQTRVPMLNIDVANGYTENFVRAVGKLRDENPDAIIMAGTVVTAEM TEALVIAGADIVRVGIGSGSVCTTRDLTGVGYPQLSAVIECADAAHGLKGHVCSDGGCTVPGDIAKAYGGGADFVMLGGM LAGHAECGGELQYVEEDGRQVPKSMTFYGMSSETAMNKYHGGVADYRAAEGKTVAVPYRGEVRATVETIAGGLRSAMTYM GAENLKEVPKRTTFILVNAQRNTVFDR
Sequences:
>Translated_347_residues MHIDLNPKLDFRDVLIRPKRSVLSSRFEANISRSFRFRHSSQAWTGFPLIASNMDTVGTIEMAEAFRPFGALVALHKFYD PERLAQYLDRHENPNVFLTVGTGAADWERLAAVKAQTRVPMLNIDVANGYTENFVRAVGKLRDENPDAIIMAGTVVTAEM TEALVIAGADIVRVGIGSGSVCTTRDLTGVGYPQLSAVIECADAAHGLKGHVCSDGGCTVPGDIAKAYGGGADFVMLGGM LAGHAECGGELQYVEEDGRQVPKSMTFYGMSSETAMNKYHGGVADYRAAEGKTVAVPYRGEVRATVETIAGGLRSAMTYM GAENLKEVPKRTTFILVNAQRNTVFDR >Mature_347_residues MHIDLNPKLDFRDVLIRPKRSVLSSRFEANISRSFRFRHSSQAWTGFPLIASNMDTVGTIEMAEAFRPFGALVALHKFYD PERLAQYLDRHENPNVFLTVGTGAADWERLAAVKAQTRVPMLNIDVANGYTENFVRAVGKLRDENPDAIIMAGTVVTAEM TEALVIAGADIVRVGIGSGSVCTTRDLTGVGYPQLSAVIECADAAHGLKGHVCSDGGCTVPGDIAKAYGGGADFVMLGGM LAGHAECGGELQYVEEDGRQVPKSMTFYGMSSETAMNKYHGGVADYRAAEGKTVAVPYRGEVRATVETIAGGLRSAMTYM GAENLKEVPKRTTFILVNAQRNTVFDR
Specific function: Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides [H]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPDH/GMPR family. GuaC type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI50541956, Length=349, Percent_Identity=57.3065902578797, Blast_Score=401, Evalue=1e-112, Organism=Homo sapiens, GI50541954, Length=349, Percent_Identity=57.3065902578797, Blast_Score=400, Evalue=1e-112, Organism=Homo sapiens, GI50541952, Length=349, Percent_Identity=57.3065902578797, Blast_Score=400, Evalue=1e-112, Organism=Homo sapiens, GI50541948, Length=349, Percent_Identity=57.3065902578797, Blast_Score=400, Evalue=1e-112, Organism=Homo sapiens, GI156104880, Length=346, Percent_Identity=56.0693641618497, Blast_Score=393, Evalue=1e-109, Organism=Homo sapiens, GI66933016, Length=236, Percent_Identity=32.6271186440678, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI217035146, Length=233, Percent_Identity=30.4721030042918, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI217035152, Length=233, Percent_Identity=30.4721030042918, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI217035150, Length=233, Percent_Identity=30.4721030042918, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI34328930, Length=233, Percent_Identity=30.4721030042918, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI217035148, Length=233, Percent_Identity=30.4721030042918, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI156616279, Length=233, Percent_Identity=30.4721030042918, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI34328928, Length=233, Percent_Identity=30.4721030042918, Blast_Score=94, Evalue=2e-19, Organism=Escherichia coli, GI1786293, Length=352, Percent_Identity=57.9545454545455, Blast_Score=391, Evalue=1e-110, Organism=Escherichia coli, GI1788855, Length=235, Percent_Identity=36.1702127659575, Blast_Score=113, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17560440, Length=350, Percent_Identity=54, Blast_Score=374, Evalue=1e-104, Organism=Caenorhabditis elegans, GI71994385, Length=233, Percent_Identity=30.0429184549356, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71994389, Length=161, Percent_Identity=36.0248447204969, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6323585, Length=237, Percent_Identity=32.0675105485232, Blast_Score=102, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6322012, Length=259, Percent_Identity=32.4324324324324, Blast_Score=102, Evalue=9e-23, Organism=Saccharomyces cerevisiae, GI6323464, Length=237, Percent_Identity=31.2236286919831, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6319352, Length=120, Percent_Identity=36.6666666666667, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24641071, Length=274, Percent_Identity=29.9270072992701, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24641073, Length=274, Percent_Identity=29.9270072992701, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI28571163, Length=274, Percent_Identity=29.9270072992701, Blast_Score=102, Evalue=3e-22,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR005993 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00478 IMPDH [H]
EC number: =1.7.1.7 [H]
Molecular weight: Translated: 37480; Mature: 37480
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIDLNPKLDFRDVLIRPKRSVLSSRFEANISRSFRFRHSSQAWTGFPLIASNMDTVGTI CEECCCCCCCHHHHHCCCHHHHHHHHHHHCCCHHEEEECCCCCCCCCCEEECCCCCCCHH EMAEAFRPFGALVALHKFYDPERLAQYLDRHENPNVFLTVGTGAADWERLAAVKAQTRVP HHHHHHCHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCC MLNIDVANGYTENFVRAVGKLRDENPDAIIMAGTVVTAEMTEALVIAGADIVRVGIGSGS EEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHEEEEECCCEEEEECCCCC VCTTRDLTGVGYPQLSAVIECADAAHGLKGHVCSDGGCTVPGDIAKAYGGGADFVMLGGM EEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHCCCCCCHHHHCCH LAGHAECGGELQYVEEDGRQVPKSMTFYGMSSETAMNKYHGGVADYRAAEGKTVAVPYRG HHCCCCCCCCEEEEHHHHHHCCCCEEEECCCCHHHHHHHCCCCHHHCCCCCCEEEECCCC EVRATVETIAGGLRSAMTYMGAENLKEVPKRTTFILVNAQRNTVFDR CHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MHIDLNPKLDFRDVLIRPKRSVLSSRFEANISRSFRFRHSSQAWTGFPLIASNMDTVGTI CEECCCCCCCHHHHHCCCHHHHHHHHHHHCCCHHEEEECCCCCCCCCCEEECCCCCCCHH EMAEAFRPFGALVALHKFYDPERLAQYLDRHENPNVFLTVGTGAADWERLAAVKAQTRVP HHHHHHCHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCC MLNIDVANGYTENFVRAVGKLRDENPDAIIMAGTVVTAEMTEALVIAGADIVRVGIGSGS EEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHEEEEECCCEEEEECCCCC VCTTRDLTGVGYPQLSAVIECADAAHGLKGHVCSDGGCTVPGDIAKAYGGGADFVMLGGM EEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHCCCCCCHHHHCCH LAGHAECGGELQYVEEDGRQVPKSMTFYGMSSETAMNKYHGGVADYRAAEGKTVAVPYRG HHCCCCCCCCEEEEHHHHHHCCCCEEEECCCCHHHHHHHCCCCHHHCCCCCCEEEECCCC EVRATVETIAGGLRSAMTYMGAENLKEVPKRTTFILVNAQRNTVFDR CHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA