| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is deaD [H]
Identifier: 86747306
GI number: 86747306
Start: 193912
End: 195951
Strand: Reverse
Name: deaD [H]
Synonym: RPB_0179
Alternate gene names: 86747306
Gene position: 195951-193912 (Counterclockwise)
Preceding gene: 86747307
Following gene: 86747304
Centisome position: 3.68
GC content: 69.36
Gene sequence:
>2040_bases GTGCCATTCTCGACCACTCTCCCGCCGCTCGCCCGAGCCCTGGCGGAGCGCCATTATTCCGAAGCCACGCCGGTGCAAAG CGCGGTGCTGGCGCCCGATGCCGCGGGCCGCGATCTGCTGGTGTCGGCGCAGACCGGCTCCGGCAAGACCGTCGCCTATG GCCTGGCCATCGCGCCCGATCTGCTCGGCGAGGCCGAGCGCTTCGAGCCGGCCGCCGCGCCGCTGGCGCTGATCGTGGCG CCGACCCGCGAACTCGCGCTGCAGGTGCATCGCGAACTCGGCTGGTTGTACGGCGCCACCGGCGCACGGGTGGTGTCCTG CGTCGGCGGCATGGACCCGCGCCGCGAGCAGCGCGAACTGGCCGAGGGCGCGCATATCGTGGTCGGCACGCCGGGGCGGC TGTGCGACCATCTGCGCCGCAACCGGCTCGACGTCTCGCAATTGAAGGCCGTGGTGCTCGACGAGGCCGACGAGATGCTC GATCTCGGCTTTCGCGAGGACATGGAGTTCATCCTCAAGACCACGCCCGACAGCCGCCGCACGCTGCTGTTTTCGGCGAC GCTGCCGCGCGGCATCATCGCGCTGGCCAAGACCTATCAGCACAACGCGTTCCGCGTCGAAGTCGCCGGCCGCGAAGGCG GCCACGCCGATATCGAATATCGCGCCATCCGGATCGCGCCGAACGATGTCGAACACGCGGTGGTCAACACCCTGCGCTAC GTCGAATCGCCGACCGCGATCGTGTTCTGTGCCACCCGCAGCGGCGTGACCCATCTGCAGACCGCGCTGCTGGAGCGCGG CTTCTCGGTGGTGGCGCTATCGGGCGAGCTCACCCAGAACGAGCGCACCAACGCGCTCAACGCGCTGCGCGACGGCCGCG CCAGGGTCTGCGTCGCCACCGATGTCGCCGCCCGCGGCATCGATCTGCCCAATCTCGGCCTGGTCATCCACGCCGATCTG CCCAACGATCCGGAAGTGATGCAGCATCGCTCGGGCCGCACCGGGCGCGCCGGCAAGAAGGGCATCAGCGTTCTGTTGGT GCCGCCGGCGCGGCGGCGACGCGCCGAATCGCTGCTCGGCCTCGCCGGCATCGAAGCGATCTGGGGCACCGCGCCGCAGG CCGACGAGATCCGCGTGCTCGATCAGCAGCGCATGATGCAGGATGCGCTGTTCACCGAGGAGACCACGCCCGACGATCAG GCGTTGGCGCAAGCGCTGCTCGCCGAGCGCTCTGCCGAGGAGATCGCGGTCGCGTTGGCGCGGCTGTATCGCGCCCGGCT GCCGGCCCCGGAGGACATTCTCGATCCGGGCGAACGCCCGGCCCGCGGCCGCGACGATCGCGCCCCCGCCAAGGGTGCGC GGGCGCCACGCGAGGAGCGCGACTATGGTCCGCGCGACCCCGGTTCGCGGGCGCGCCCGGGCAAGGCCGGGCAGAAACAT GCGATCACCGACGGGGTCTGGTTTCGCGCCGCGATCGGCAAGCGCAAGAACGCCGAGGCGCGCTGGCTGCTGCCGATGAT CTGCCGCCGCGGCGGCATCGATCGTCAGGCGATCGGCGCCATCCGGATCCTCGACACCACCACCGAATTCGAGATCGCGG CCGCGGCCGCGGTGGACTTCGCCGCGCAGATCAAGCGTCCGGACAAGGACGACAACATCCGGATCGAGCCCTTGATCGGC GCCAAGCCGATCGAAGCGGGCGCCGAGCGAGCCTTGTCCAAGCCGCATGGCGGTCAATTGTCCGAACGCGAGACGCGCCG CAGCAAGCGGCCCGATTCGTGGTCGCCGCAGATCGAACCGCTGGCCGACCCGCGCCCGCCACGCGCCGGCAAGGATGCGG GGTTCAAGGACGCCGGATTCAAGAAGAAGCAAGTCTTCAAGAAGGATGGCTTCAAGCCGGAAGGTTTCAAGCAGGACGGC TTGAAGACGAAAAAGTCGCGTGACGACAAGCCGGCCTATGTCAGCAAGGCACGCCGTGCCGATCCGTCGGCGCCCAACCC GGGCTTCAAGAAAAAGCCCAAGAAGAAGTTTCGCGACTGA
Upstream 100 bases:
>100_bases CGCCGGCCGCTTGCGGCTGTGCATCGCCGCGGCATGCCGCGTGGATCCGCTGGGTCCCGGGACTTCCCATTCGGCGTCAT CGCCCAGAAGGTCTCTATCC
Downstream 100 bases:
>100_bases CAGGACGCCAACTACGCGACGCCATGCGTGCCGCGGGCGAGGAAGAACAGTTCGACCAGCCGGCCCTTCTTGCCGGCGAG GGCGAAGATGCATTCCGGCA
Product: DEAD/DEAH box helicase
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 679; Mature: 678
Protein sequence:
>679_residues MPFSTTLPPLARALAERHYSEATPVQSAVLAPDAAGRDLLVSAQTGSGKTVAYGLAIAPDLLGEAERFEPAAAPLALIVA PTRELALQVHRELGWLYGATGARVVSCVGGMDPRREQRELAEGAHIVVGTPGRLCDHLRRNRLDVSQLKAVVLDEADEML DLGFREDMEFILKTTPDSRRTLLFSATLPRGIIALAKTYQHNAFRVEVAGREGGHADIEYRAIRIAPNDVEHAVVNTLRY VESPTAIVFCATRSGVTHLQTALLERGFSVVALSGELTQNERTNALNALRDGRARVCVATDVAARGIDLPNLGLVIHADL PNDPEVMQHRSGRTGRAGKKGISVLLVPPARRRRAESLLGLAGIEAIWGTAPQADEIRVLDQQRMMQDALFTEETTPDDQ ALAQALLAERSAEEIAVALARLYRARLPAPEDILDPGERPARGRDDRAPAKGARAPREERDYGPRDPGSRARPGKAGQKH AITDGVWFRAAIGKRKNAEARWLLPMICRRGGIDRQAIGAIRILDTTTEFEIAAAAAVDFAAQIKRPDKDDNIRIEPLIG AKPIEAGAERALSKPHGGQLSERETRRSKRPDSWSPQIEPLADPRPPRAGKDAGFKDAGFKKKQVFKKDGFKPEGFKQDG LKTKKSRDDKPAYVSKARRADPSAPNPGFKKKPKKKFRD
Sequences:
>Translated_679_residues MPFSTTLPPLARALAERHYSEATPVQSAVLAPDAAGRDLLVSAQTGSGKTVAYGLAIAPDLLGEAERFEPAAAPLALIVA PTRELALQVHRELGWLYGATGARVVSCVGGMDPRREQRELAEGAHIVVGTPGRLCDHLRRNRLDVSQLKAVVLDEADEML DLGFREDMEFILKTTPDSRRTLLFSATLPRGIIALAKTYQHNAFRVEVAGREGGHADIEYRAIRIAPNDVEHAVVNTLRY VESPTAIVFCATRSGVTHLQTALLERGFSVVALSGELTQNERTNALNALRDGRARVCVATDVAARGIDLPNLGLVIHADL PNDPEVMQHRSGRTGRAGKKGISVLLVPPARRRRAESLLGLAGIEAIWGTAPQADEIRVLDQQRMMQDALFTEETTPDDQ ALAQALLAERSAEEIAVALARLYRARLPAPEDILDPGERPARGRDDRAPAKGARAPREERDYGPRDPGSRARPGKAGQKH AITDGVWFRAAIGKRKNAEARWLLPMICRRGGIDRQAIGAIRILDTTTEFEIAAAAAVDFAAQIKRPDKDDNIRIEPLIG AKPIEAGAERALSKPHGGQLSERETRRSKRPDSWSPQIEPLADPRPPRAGKDAGFKDAGFKKKQVFKKDGFKPEGFKQDG LKTKKSRDDKPAYVSKARRADPSAPNPGFKKKPKKKFRD >Mature_678_residues PFSTTLPPLARALAERHYSEATPVQSAVLAPDAAGRDLLVSAQTGSGKTVAYGLAIAPDLLGEAERFEPAAAPLALIVAP TRELALQVHRELGWLYGATGARVVSCVGGMDPRREQRELAEGAHIVVGTPGRLCDHLRRNRLDVSQLKAVVLDEADEMLD LGFREDMEFILKTTPDSRRTLLFSATLPRGIIALAKTYQHNAFRVEVAGREGGHADIEYRAIRIAPNDVEHAVVNTLRYV ESPTAIVFCATRSGVTHLQTALLERGFSVVALSGELTQNERTNALNALRDGRARVCVATDVAARGIDLPNLGLVIHADLP NDPEVMQHRSGRTGRAGKKGISVLLVPPARRRRAESLLGLAGIEAIWGTAPQADEIRVLDQQRMMQDALFTEETTPDDQA LAQALLAERSAEEIAVALARLYRARLPAPEDILDPGERPARGRDDRAPAKGARAPREERDYGPRDPGSRARPGKAGQKHA ITDGVWFRAAIGKRKNAEARWLLPMICRRGGIDRQAIGAIRILDTTTEFEIAAAAAVDFAAQIKRPDKDDNIRIEPLIGA KPIEAGAERALSKPHGGQLSERETRRSKRPDSWSPQIEPLADPRPPRAGKDAGFKDAGFKKKQVFKKDGFKPEGFKQDGL KTKKSRDDKPAYVSKARRADPSAPNPGFKKKPKKKFRD
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI13129006, Length=353, Percent_Identity=37.6770538243626, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI41327773, Length=372, Percent_Identity=34.9462365591398, Blast_Score=210, Evalue=4e-54, Organism=Homo sapiens, GI50659095, Length=366, Percent_Identity=35.2459016393443, Blast_Score=206, Evalue=8e-53, Organism=Homo sapiens, GI262118318, Length=340, Percent_Identity=35.8823529411765, Blast_Score=206, Evalue=9e-53, Organism=Homo sapiens, GI216548263, Length=340, Percent_Identity=35.8823529411765, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI262231852, Length=340, Percent_Identity=35.8823529411765, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI13518015, Length=340, Percent_Identity=35.8823529411765, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI7661920, Length=369, Percent_Identity=31.9783197831978, Blast_Score=202, Evalue=1e-51, Organism=Homo sapiens, GI45446747, Length=353, Percent_Identity=33.7110481586402, Blast_Score=198, Evalue=2e-50, Organism=Homo sapiens, GI45446743, Length=353, Percent_Identity=33.7110481586402, Blast_Score=198, Evalue=2e-50, Organism=Homo sapiens, GI20149629, Length=379, Percent_Identity=31.9261213720317, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI21071032, Length=349, Percent_Identity=32.9512893982808, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI301171467, Length=363, Percent_Identity=35.2617079889807, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI87196351, Length=363, Percent_Identity=35.2617079889807, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI301171475, Length=363, Percent_Identity=35.2617079889807, Blast_Score=192, Evalue=9e-49, Organism=Homo sapiens, GI169881239, Length=363, Percent_Identity=35.2617079889807, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI13514809, Length=363, Percent_Identity=35.2617079889807, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI224593278, Length=406, Percent_Identity=31.7733990147783, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI41327771, Length=373, Percent_Identity=32.171581769437, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI148613856, Length=353, Percent_Identity=32.2946175637394, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38201710, Length=353, Percent_Identity=32.2946175637394, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI222352149, Length=363, Percent_Identity=33.3333333333333, Blast_Score=186, Evalue=8e-47, Organism=Homo sapiens, GI83700235, Length=374, Percent_Identity=34.2245989304813, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI31542656, Length=334, Percent_Identity=35.9281437125749, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=32.8877005347594, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI188035877, Length=348, Percent_Identity=31.6091954022989, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI4758138, Length=355, Percent_Identity=31.2676056338028, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI164664518, Length=358, Percent_Identity=28.7709497206704, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI38327634, Length=375, Percent_Identity=31.2, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI13514831, Length=356, Percent_Identity=32.0224719101124, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI55749865, Length=356, Percent_Identity=28.9325842696629, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI17505907, Length=398, Percent_Identity=28.643216080402, Blast_Score=159, Evalue=7e-39, Organism=Homo sapiens, GI4758112, Length=346, Percent_Identity=27.7456647398844, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI18375623, Length=346, Percent_Identity=27.7456647398844, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI41327779, Length=377, Percent_Identity=32.0954907161804, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI41327776, Length=380, Percent_Identity=28.4210526315789, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI21040371, Length=346, Percent_Identity=27.7456647398844, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI51094101, Length=393, Percent_Identity=29.5165394402036, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI164419743, Length=393, Percent_Identity=29.5165394402036, Blast_Score=151, Evalue=3e-36, Organism=Homo sapiens, GI256223453, Length=352, Percent_Identity=28.9772727272727, Blast_Score=148, Evalue=2e-35, Organism=Homo sapiens, GI38569505, Length=344, Percent_Identity=29.9418604651163, Blast_Score=144, Evalue=4e-34, Organism=Homo sapiens, GI164419732, Length=323, Percent_Identity=32.1981424148607, Blast_Score=143, Evalue=6e-34, Organism=Homo sapiens, GI38569503, Length=344, Percent_Identity=29.9418604651163, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI8922886, Length=324, Percent_Identity=32.0987654320988, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI6005743, Length=324, Percent_Identity=32.0987654320988, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI62241022, Length=324, Percent_Identity=32.0987654320988, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI62241024, Length=324, Percent_Identity=32.0987654320988, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI9966805, Length=305, Percent_Identity=30.8196721311475, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI9506931, Length=385, Percent_Identity=26.7532467532467, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI256773275, Length=345, Percent_Identity=28.695652173913, Blast_Score=116, Evalue=8e-26, Organism=Homo sapiens, GI20336298, Length=216, Percent_Identity=32.8703703703704, Blast_Score=116, Evalue=9e-26, Organism=Homo sapiens, GI4826686, Length=347, Percent_Identity=29.6829971181556, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI154759257, Length=424, Percent_Identity=28.5377358490566, Blast_Score=111, Evalue=3e-24, Organism=Escherichia coli, GI87082221, Length=545, Percent_Identity=32.1100917431193, Blast_Score=226, Evalue=3e-60, Organism=Escherichia coli, GI1787605, Length=383, Percent_Identity=37.0757180156658, Blast_Score=218, Evalue=1e-57, Organism=Escherichia coli, GI1787016, Length=340, Percent_Identity=36.4705882352941, Blast_Score=201, Evalue=2e-52, Organism=Escherichia coli, GI1790214, Length=372, Percent_Identity=36.2903225806452, Blast_Score=189, Evalue=5e-49, Organism=Escherichia coli, GI1788930, Length=343, Percent_Identity=37.0262390670554, Blast_Score=179, Evalue=5e-46, Organism=Caenorhabditis elegans, GI71987143, Length=362, Percent_Identity=33.9779005524862, Blast_Score=219, Evalue=4e-57, Organism=Caenorhabditis elegans, GI86570094, Length=351, Percent_Identity=36.4672364672365, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI17555296, Length=340, Percent_Identity=34.1176470588235, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=31.4363143631436, Blast_Score=198, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=31.4363143631436, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI32565321, Length=369, Percent_Identity=33.8753387533875, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17510307, Length=360, Percent_Identity=35.2777777777778, Blast_Score=190, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17510309, Length=360, Percent_Identity=35.2777777777778, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI71995514, Length=352, Percent_Identity=35.7954545454545, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI115533224, Length=372, Percent_Identity=32.258064516129, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17507945, Length=335, Percent_Identity=33.7313432835821, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71995718, Length=360, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17552642, Length=342, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17552114, Length=354, Percent_Identity=28.8135593220339, Blast_Score=176, Evalue=4e-44, Organism=Caenorhabditis elegans, GI193206561, Length=428, Percent_Identity=28.9719626168224, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17510559, Length=363, Percent_Identity=31.129476584022, Blast_Score=171, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17537549, Length=355, Percent_Identity=32.3943661971831, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI71999646, Length=340, Percent_Identity=31.1764705882353, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI71999644, Length=340, Percent_Identity=30.5882352941176, Blast_Score=169, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17509811, Length=353, Percent_Identity=30.8781869688385, Blast_Score=168, Evalue=9e-42, Organism=Caenorhabditis elegans, GI71982858, Length=346, Percent_Identity=28.3236994219653, Blast_Score=165, Evalue=9e-41, Organism=Caenorhabditis elegans, GI115532548, Length=348, Percent_Identity=30.7471264367816, Blast_Score=158, Evalue=7e-39, Organism=Caenorhabditis elegans, GI115532546, Length=348, Percent_Identity=30.7471264367816, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=31.1224489795918, Blast_Score=153, Evalue=3e-37, Organism=Caenorhabditis elegans, GI32564046, Length=386, Percent_Identity=31.3471502590674, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17505370, Length=343, Percent_Identity=31.1953352769679, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17507877, Length=353, Percent_Identity=29.1784702549575, Blast_Score=148, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17507879, Length=359, Percent_Identity=28.4122562674095, Blast_Score=146, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17507881, Length=378, Percent_Identity=29.6296296296296, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI193208216, Length=405, Percent_Identity=29.1358024691358, Blast_Score=139, Evalue=6e-33, Organism=Caenorhabditis elegans, GI17508543, Length=369, Percent_Identity=28.9972899728997, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17553716, Length=336, Percent_Identity=27.6785714285714, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI17536099, Length=375, Percent_Identity=29.8666666666667, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI17536101, Length=375, Percent_Identity=29.8666666666667, Blast_Score=135, Evalue=7e-32, Organism=Caenorhabditis elegans, GI17536103, Length=340, Percent_Identity=31.1764705882353, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71990816, Length=349, Percent_Identity=28.3667621776504, Blast_Score=122, Evalue=6e-28, Organism=Caenorhabditis elegans, GI71997889, Length=397, Percent_Identity=28.7153652392947, Blast_Score=120, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17556951, Length=355, Percent_Identity=27.0422535211268, Blast_Score=118, Evalue=1e-26, Organism=Caenorhabditis elegans, GI25148203, Length=394, Percent_Identity=22.5888324873096, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI25148291, Length=338, Percent_Identity=25.4437869822485, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71982862, Length=200, Percent_Identity=30, Blast_Score=103, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17557982, Length=385, Percent_Identity=26.2337662337662, Blast_Score=100, Evalue=4e-21, Organism=Caenorhabditis elegans, GI71987152, Length=96, Percent_Identity=38.5416666666667, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71987997, Length=384, Percent_Identity=24.4791666666667, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71987993, Length=384, Percent_Identity=24.4791666666667, Blast_Score=68, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321856, Length=346, Percent_Identity=36.7052023121387, Blast_Score=206, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6321360, Length=347, Percent_Identity=34.5821325648415, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6324778, Length=357, Percent_Identity=35.8543417366947, Blast_Score=199, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6325138, Length=377, Percent_Identity=34.4827586206897, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6323021, Length=361, Percent_Identity=33.2409972299169, Blast_Score=187, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6324217, Length=335, Percent_Identity=33.7313432835821, Blast_Score=184, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6322912, Length=325, Percent_Identity=33.8461538461538, Blast_Score=181, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6322323, Length=325, Percent_Identity=33.8461538461538, Blast_Score=181, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6320224, Length=350, Percent_Identity=30.5714285714286, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6320041, Length=339, Percent_Identity=30.6784660766962, Blast_Score=174, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6323947, Length=350, Percent_Identity=33.4285714285714, Blast_Score=173, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=31.043956043956, Blast_Score=167, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6321963, Length=353, Percent_Identity=32.2946175637394, Blast_Score=167, Evalue=6e-42, Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=32.4022346368715, Blast_Score=162, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6321111, Length=389, Percent_Identity=29.5629820051414, Blast_Score=161, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6319714, Length=356, Percent_Identity=28.9325842696629, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6320400, Length=368, Percent_Identity=31.7934782608696, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6324620, Length=346, Percent_Identity=31.5028901734104, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6320119, Length=348, Percent_Identity=29.0229885057471, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6319618, Length=419, Percent_Identity=27.4463007159904, Blast_Score=143, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6322876, Length=427, Percent_Identity=27.8688524590164, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6321267, Length=337, Percent_Identity=27.5964391691395, Blast_Score=123, Evalue=7e-29, Organism=Saccharomyces cerevisiae, GI6323306, Length=405, Percent_Identity=24.9382716049383, Blast_Score=110, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6320173, Length=180, Percent_Identity=32.2222222222222, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6324366, Length=163, Percent_Identity=31.9018404907975, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24585582, Length=359, Percent_Identity=33.4261838440111, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI24645031, Length=372, Percent_Identity=32.258064516129, Blast_Score=199, Evalue=7e-51, Organism=Drosophila melanogaster, GI24642151, Length=364, Percent_Identity=34.8901098901099, Blast_Score=198, Evalue=1e-50, Organism=Drosophila melanogaster, GI24584399, Length=337, Percent_Identity=34.4213649851632, Blast_Score=196, Evalue=5e-50, Organism=Drosophila melanogaster, GI24662330, Length=343, Percent_Identity=31.1953352769679, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI17985987, Length=364, Percent_Identity=34.3406593406593, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI24584994, Length=357, Percent_Identity=34.1736694677871, Blast_Score=188, Evalue=1e-47, Organism=Drosophila melanogaster, GI21355075, Length=345, Percent_Identity=33.6231884057971, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI17977678, Length=347, Percent_Identity=35.1585014409222, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI28574962, Length=348, Percent_Identity=32.4712643678161, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI17136814, Length=344, Percent_Identity=33.7209302325581, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI18857967, Length=356, Percent_Identity=32.0224719101124, Blast_Score=178, Evalue=1e-44, Organism=Drosophila melanogaster, GI24582080, Length=363, Percent_Identity=31.9559228650138, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI24582078, Length=363, Percent_Identity=31.9559228650138, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI17136248, Length=363, Percent_Identity=31.9559228650138, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI24582075, Length=363, Percent_Identity=31.9559228650138, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI21356161, Length=355, Percent_Identity=32.6760563380282, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI28571808, Length=351, Percent_Identity=32.4786324786325, Blast_Score=172, Evalue=9e-43, Organism=Drosophila melanogaster, GI28571809, Length=351, Percent_Identity=32.4786324786325, Blast_Score=172, Evalue=9e-43, Organism=Drosophila melanogaster, GI24644479, Length=351, Percent_Identity=32.1937321937322, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI24644483, Length=349, Percent_Identity=32.378223495702, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI281361218, Length=349, Percent_Identity=32.378223495702, Blast_Score=169, Evalue=8e-42, Organism=Drosophila melanogaster, GI24644481, Length=349, Percent_Identity=32.378223495702, Blast_Score=169, Evalue=8e-42, Organism=Drosophila melanogaster, GI24644487, Length=349, Percent_Identity=32.378223495702, Blast_Score=169, Evalue=8e-42, Organism=Drosophila melanogaster, GI45551833, Length=349, Percent_Identity=32.378223495702, Blast_Score=169, Evalue=8e-42, Organism=Drosophila melanogaster, GI24644485, Length=349, Percent_Identity=32.378223495702, Blast_Score=169, Evalue=8e-42, Organism=Drosophila melanogaster, GI28575014, Length=343, Percent_Identity=31.1953352769679, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24581954, Length=348, Percent_Identity=29.8850574712644, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI24581952, Length=348, Percent_Identity=29.8850574712644, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI24581956, Length=348, Percent_Identity=29.8850574712644, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI24583281, Length=355, Percent_Identity=27.3239436619718, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24583279, Length=355, Percent_Identity=27.3239436619718, Blast_Score=153, Evalue=4e-37, Organism=Drosophila melanogaster, GI281365720, Length=296, Percent_Identity=32.4324324324324, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI17647335, Length=412, Percent_Identity=28.1553398058252, Blast_Score=148, Evalue=1e-35, Organism=Drosophila melanogaster, GI18859659, Length=412, Percent_Identity=29.3689320388349, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI28571338, Length=412, Percent_Identity=29.3689320388349, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24642822, Length=369, Percent_Identity=29.810298102981, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24666101, Length=377, Percent_Identity=29.7082228116711, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI21355559, Length=367, Percent_Identity=31.6076294277929, Blast_Score=130, Evalue=4e-30, Organism=Drosophila melanogaster, GI20130173, Length=426, Percent_Identity=27.4647887323944, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=28.7461773700306, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI24643725, Length=373, Percent_Identity=26.0053619302949, Blast_Score=106, Evalue=5e-23, Organism=Drosophila melanogaster, GI17136666, Length=377, Percent_Identity=28.9124668435013, Blast_Score=103, Evalue=5e-22, Organism=Drosophila melanogaster, GI19920478, Length=315, Percent_Identity=26.984126984127, Blast_Score=91, Evalue=4e-18, Organism=Drosophila melanogaster, GI24640164, Length=344, Percent_Identity=21.2209302325581, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 74104; Mature: 73973
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFSTTLPPLARALAERHYSEATPVQSAVLAPDAAGRDLLVSAQTGSGKTVAYGLAIAPD CCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEECCHH LLGEAERFEPAAAPLALIVAPTRELALQVHRELGWLYGATGARVVSCVGGMDPRREQREL HHCCHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHH AEGAHIVVGTPGRLCDHLRRNRLDVSQLKAVVLDEADEMLDLGFREDMEFILKTTPDSRR HCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCCCCE TLLFSATLPRGIIALAKTYQHNAFRVEVAGREGGHADIEYRAIRIAPNDVEHAVVNTLRY EEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHH VESPTAIVFCATRSGVTHLQTALLERGFSVVALSGELTQNERTNALNALRDGRARVCVAT HCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEE DVAARGIDLPNLGLVIHADLPNDPEVMQHRSGRTGRAGKKGISVLLVPPARRRRAESLLG CHHHCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHH LAGIEAIWGTAPQADEIRVLDQQRMMQDALFTEETTPDDQALAQALLAERSAEEIAVALA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH RLYRARLPAPEDILDPGERPARGRDDRAPAKGARAPREERDYGPRDPGSRARPGKAGQKH HHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC AITDGVWFRAAIGKRKNAEARWLLPMICRRGGIDRQAIGAIRILDTTTEFEIAAAAAVDF CCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHCEEEEEECCCCHHHHHHHHHHH AAQIKRPDKDDNIRIEPLIGAKPIEAGAERALSKPHGGQLSERETRRSKRPDSWSPQIEP HHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCC LADPRPPRAGKDAGFKDAGFKKKQVFKKDGFKPEGFKQDGLKTKKSRDDKPAYVSKARRA CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC DPSAPNPGFKKKPKKKFRD CCCCCCCCCCCCCHHHCCC >Mature Secondary Structure PFSTTLPPLARALAERHYSEATPVQSAVLAPDAAGRDLLVSAQTGSGKTVAYGLAIAPD CCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEECCHH LLGEAERFEPAAAPLALIVAPTRELALQVHRELGWLYGATGARVVSCVGGMDPRREQREL HHCCHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHH AEGAHIVVGTPGRLCDHLRRNRLDVSQLKAVVLDEADEMLDLGFREDMEFILKTTPDSRR HCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCCCCE TLLFSATLPRGIIALAKTYQHNAFRVEVAGREGGHADIEYRAIRIAPNDVEHAVVNTLRY EEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHH VESPTAIVFCATRSGVTHLQTALLERGFSVVALSGELTQNERTNALNALRDGRARVCVAT HCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEE DVAARGIDLPNLGLVIHADLPNDPEVMQHRSGRTGRAGKKGISVLLVPPARRRRAESLLG CHHHCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHH LAGIEAIWGTAPQADEIRVLDQQRMMQDALFTEETTPDDQALAQALLAERSAEEIAVALA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH RLYRARLPAPEDILDPGERPARGRDDRAPAKGARAPREERDYGPRDPGSRARPGKAGQKH HHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC AITDGVWFRAAIGKRKNAEARWLLPMICRRGGIDRQAIGAIRILDTTTEFEIAAAAAVDF CCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHCEEEEEECCCCHHHHHHHHHHH AAQIKRPDKDDNIRIEPLIGAKPIEAGAERALSKPHGGQLSERETRRSKRPDSWSPQIEP HHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCC LADPRPPRAGKDAGFKDAGFKKKQVFKKDGFKPEGFKQDGLKTKKSRDDKPAYVSKARRA CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC DPSAPNPGFKKKPKKKFRD CCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]