| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747300
Identifier: 86747300
GI number: 86747300
Start: 187741
End: 188562
Strand: Reverse
Name: 86747300
Synonym: RPB_0173
Alternate gene names: NA
Gene position: 188562-187741 (Counterclockwise)
Preceding gene: 86747301
Following gene: 86747299
Centisome position: 3.54
GC content: 65.94
Gene sequence:
>822_bases ATGAAACTGATCCAGCTCAGCGATATCCATCTGACGGCGCCAGGGGCGACGATCGGCGGCCGCGATCCGCGGCGCAATTT CGAACGCGCGCTGGCGCACGTGCTGCGCGATCACCACGATGCCGAGCTGATGGTGATCACCGGCGATCTGTCGGACTGGG GCGATCGTGACGACTATCTCTGGCTCAGGACGACGCTCGACGCGTTTCCGATTCCGACGCGGCTGTGCATCGGCAACCAC GACCGCCGCGACGTCTTCCTCGGCGTGTTTCCCGAATATGACGACGGCGGCTTCGTCCAGGGCATGCACGACGTCTCGGC GGGGCGCTGCCTGTTCCTCGACACGGTCGAGCCGAACACCCATGCGGGCCGCTATTGCGACGCGCGGCAAGTCTGGCTGC AACGGCAATTGACCGGACACCCCGGCCCGTTCCTGCTGTTCATGCATCATCACCCGATGCCGACTCATCTCGGCCCGATG GACCGAATCGGGCTCAGCGACGGCGCAGCGTTCCGCAGCATCGTCGGGGCGCATCGGAACCGGATCCGCCACGTCTTCTT CGGCCACTGCCACCTGCCGCTCGCCGGTTCGATCGGCGGCGTGCCGACCTCGTCGCTGCGCGGCACCAATCACGCATCGT TTCCGCTGTTCTCCGAAACGGCGATGCTGAGCGCCTCCGACCTGCCGCAATCCTACGGCGTCTGCTTCGTCGGTGCGGAC TACGTCACGGTCCACATGGTCGAGTTCGGCTACGACGGCCCGATCCGGGTGGAAGGCTCGCCCGAATACACGGCCTGGGA CCGGGAGACCATGGTGCGATGA
Upstream 100 bases:
>100_bases TGCAGAAGCTGCTGCCGAAATCGGTCGGCGCGGCGCGCTGATACGCAACAACCTGCGCGGAGCGGGCTCGCCCGCTCCGC TTTCGTTCCGGGAGGACGTC
Downstream 100 bases:
>100_bases AATTCGTCGTTCTGACCGACACTCATTTCGTCGCCCGCGGCCGCCGCATCTACGGGCTCGATCCCGCCGAGCGGCTGCGG GCCGCAATCGGCTGCATCAA
Product: metallophosphoesterase
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Phosphodiesterase; CAMP Phosphodiesterase; Cyclic Nucleotide Phosphodiesterase; 3 5'-Cyclic-Nucleotide Phosphodiesterase; ICC Protein; Phosphohydrolase; Icc Protein; 35'-Cyclic-Nucleotide Phosphodiesterase CpdA; Phosphoesterase; Cyclic AMP Phosphodiesterase; Serine/Threonine Specific Protein Phosphatase; Calcineurin Phosphoesterase Domain-Containing Protein; Protein Icc; Calcineurin-Like Phosphoesterase Family; Calcineurin-Like Phosphoesterase Family Protein
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKLIQLSDIHLTAPGATIGGRDPRRNFERALAHVLRDHHDAELMVITGDLSDWGDRDDYLWLRTTLDAFPIPTRLCIGNH DRRDVFLGVFPEYDDGGFVQGMHDVSAGRCLFLDTVEPNTHAGRYCDARQVWLQRQLTGHPGPFLLFMHHHPMPTHLGPM DRIGLSDGAAFRSIVGAHRNRIRHVFFGHCHLPLAGSIGGVPTSSLRGTNHASFPLFSETAMLSASDLPQSYGVCFVGAD YVTVHMVEFGYDGPIRVEGSPEYTAWDRETMVR
Sequences:
>Translated_273_residues MKLIQLSDIHLTAPGATIGGRDPRRNFERALAHVLRDHHDAELMVITGDLSDWGDRDDYLWLRTTLDAFPIPTRLCIGNH DRRDVFLGVFPEYDDGGFVQGMHDVSAGRCLFLDTVEPNTHAGRYCDARQVWLQRQLTGHPGPFLLFMHHHPMPTHLGPM DRIGLSDGAAFRSIVGAHRNRIRHVFFGHCHLPLAGSIGGVPTSSLRGTNHASFPLFSETAMLSASDLPQSYGVCFVGAD YVTVHMVEFGYDGPIRVEGSPEYTAWDRETMVR >Mature_273_residues MKLIQLSDIHLTAPGATIGGRDPRRNFERALAHVLRDHHDAELMVITGDLSDWGDRDDYLWLRTTLDAFPIPTRLCIGNH DRRDVFLGVFPEYDDGGFVQGMHDVSAGRCLFLDTVEPNTHAGRYCDARQVWLQRQLTGHPGPFLLFMHHHPMPTHLGPM DRIGLSDGAAFRSIVGAHRNRIRHVFFGHCHLPLAGSIGGVPTSSLRGTNHASFPLFSETAMLSASDLPQSYGVCFVGAD YVTVHMVEFGYDGPIRVEGSPEYTAWDRETMVR
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30483; Mature: 30483
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIQLSDIHLTAPGATIGGRDPRRNFERALAHVLRDHHDAELMVITGDLSDWGDRDDYL CEEEEEECEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEE WLRTTLDAFPIPTRLCIGNHDRRDVFLGVFPEYDDGGFVQGMHDVSAGRCLFLDTVEPNT EEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCCCCCEEEEEECCCCC HAGRYCDARQVWLQRQLTGHPGPFLLFMHHHPMPTHLGPMDRIGLSDGAAFRSIVGAHRN CCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH RIRHVFFGHCHLPLAGSIGGVPTSSLRGTNHASFPLFSETAMLSASDLPQSYGVCFVGAD HEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECHHHEEEHHCCCHHCCEEEEECC YVTVHMVEFGYDGPIRVEGSPEYTAWDRETMVR EEEEEEEEECCCCCEEECCCCCCCCCCHHHCCC >Mature Secondary Structure MKLIQLSDIHLTAPGATIGGRDPRRNFERALAHVLRDHHDAELMVITGDLSDWGDRDDYL CEEEEEECEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEE WLRTTLDAFPIPTRLCIGNHDRRDVFLGVFPEYDDGGFVQGMHDVSAGRCLFLDTVEPNT EEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCCCCCEEEEEECCCCC HAGRYCDARQVWLQRQLTGHPGPFLLFMHHHPMPTHLGPMDRIGLSDGAAFRSIVGAHRN CCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH RIRHVFFGHCHLPLAGSIGGVPTSSLRGTNHASFPLFSETAMLSASDLPQSYGVCFVGAD HEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECHHHEEEHHCCCHHCCEEEEECC YVTVHMVEFGYDGPIRVEGSPEYTAWDRETMVR EEEEEEEEECCCCCEEECCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA