| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is icc [C]
Identifier: 86747299
GI number: 86747299
Start: 186920
End: 187744
Strand: Reverse
Name: icc [C]
Synonym: RPB_0172
Alternate gene names: 86747299
Gene position: 187744-186920 (Counterclockwise)
Preceding gene: 86747300
Following gene: 86747298
Centisome position: 3.52
GC content: 65.58
Gene sequence:
>825_bases ATGAAATTCGTCGTTCTGACCGACACTCATTTCGTCGCCCGCGGCCGCCGCATCTACGGGCTCGATCCCGCCGAGCGGCT GCGGGCCGCAATCGGCTGCATCAATCGCGACCACCCGGAGATCGCCTTCGTGATCGTCACCGGCGATCTCGCGCATTGGG GCGAGGACGCCGCTTATGAAGCGTTGGCCGAAGTCCTCGGCGAACTGCGTGCGCTGACGATTCTGCTGATGGGCAATCAC GACAAGCGCGACGGCTTCGCGCGCTATTTCCCGGGCGTGCCGCGCGACGCCGACGGCTTCGTCCAGACCATGCAGGTGTT CGACGCCGCCACTGTTGTGACGCTCGACACGCTGAACGAAGCCGCACCCAATCACGAGGGGCTGTTGTGCGACGCCCGGC TGGCGTTTCTCGAACACGCGCTGACTTCGGCGCCGACCGACCGGCCGTTGCTGCTGTTCCAGCATCACCCGCCGTTCGAC ACCGGGCTGCGCTACATGGATACGATCCGGCTTGCCAATCCCGAAGCCGAATGGGAGGTGATCGCGCGGACGCGGCGGCC CGATTATCTGTTCATGGGCCATCTGCACCGGCCGATCGCGGGTGTCTGGCGCGGCATTCCGTTCCACATCCAGCGCGCGC TGGCGCATCAGGTCGCGTTCGATCTCGTGACCGAAGGCCACATCCCCGGCTCGCATGAGGCGCCGGACTACGCGCATGTC AGCGTCGAGGGCGACCGCATCGTGATCCATCAGCGCTCGTTCCTGTACGACGGACCGCTGTTCTCGCTGCACGACAAGGC TGCGCTCGAACGCGCCGAGTTCTGA
Upstream 100 bases:
>100_bases ACTACGTCACGGTCCACATGGTCGAGTTCGGCTACGACGGCCCGATCCGGGTGGAAGGCTCGCCCGAATACACGGCCTGG GACCGGGAGACCATGGTGCG
Downstream 100 bases:
>100_bases GCGCGCTCGTCGAGCCTCGGCGACGGCCCCTTCGGCGATCGGCATTACGGTGCGATCGTGACACGGGAGGCGACCATAGG GTCGGCCGCCTTGATTCCGC
Product: metallophosphoesterase
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Phosphodiesterase; Cyclic 3 5'-Adenosine Monophosphate Phosphodiesterase; CAMP Phosphodiesterase; Cyclic Nucleotide Phosphodiesterase; Phosphohydrolase; Icc Protein; ICC Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase; 35'-Cyclic-Nucleotide Phosphodiesterase CpdA; Calcineurin Phosphoesterase Domain-Containing Protein; Protein Icc; Phosphoesterase; Cyclic 3\ 5\'-Adenosine Monophosphate Phosphodiesterase; Ser/Thr Protein Phosphatase; Cyclic 3 5-Adenosine Monophosphate Phosphodiesterase; Metallo-Phosphoesterase; Calcineurin-Like Phosphoesterase Family; Calcineurin-Like Phosphoesterase Family Protein
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKFVVLTDTHFVARGRRIYGLDPAERLRAAIGCINRDHPEIAFVIVTGDLAHWGEDAAYEALAEVLGELRALTILLMGNH DKRDGFARYFPGVPRDADGFVQTMQVFDAATVVTLDTLNEAAPNHEGLLCDARLAFLEHALTSAPTDRPLLLFQHHPPFD TGLRYMDTIRLANPEAEWEVIARTRRPDYLFMGHLHRPIAGVWRGIPFHIQRALAHQVAFDLVTEGHIPGSHEAPDYAHV SVEGDRIVIHQRSFLYDGPLFSLHDKAALERAEF
Sequences:
>Translated_274_residues MKFVVLTDTHFVARGRRIYGLDPAERLRAAIGCINRDHPEIAFVIVTGDLAHWGEDAAYEALAEVLGELRALTILLMGNH DKRDGFARYFPGVPRDADGFVQTMQVFDAATVVTLDTLNEAAPNHEGLLCDARLAFLEHALTSAPTDRPLLLFQHHPPFD TGLRYMDTIRLANPEAEWEVIARTRRPDYLFMGHLHRPIAGVWRGIPFHIQRALAHQVAFDLVTEGHIPGSHEAPDYAHV SVEGDRIVIHQRSFLYDGPLFSLHDKAALERAEF >Mature_274_residues MKFVVLTDTHFVARGRRIYGLDPAERLRAAIGCINRDHPEIAFVIVTGDLAHWGEDAAYEALAEVLGELRALTILLMGNH DKRDGFARYFPGVPRDADGFVQTMQVFDAATVVTLDTLNEAAPNHEGLLCDARLAFLEHALTSAPTDRPLLLFQHHPPFD TGLRYMDTIRLANPEAEWEVIARTRRPDYLFMGHLHRPIAGVWRGIPFHIQRALAHQVAFDLVTEGHIPGSHEAPDYAHV SVEGDRIVIHQRSFLYDGPLFSLHDKAALERAEF
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789410, Length=208, Percent_Identity=30.2884615384615, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30793; Mature: 30793
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVVLTDTHFVARGRRIYGLDPAERLRAAIGCINRDHPEIAFVIVTGDLAHWGEDAAYE CEEEEEECCHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHCCCHHHHH ALAEVLGELRALTILLMGNHDKRDGFARYFPGVPRDADGFVQTMQVFDAATVVTLDTLNE HHHHHHHHHHHEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHH AAPNHEGLLCDARLAFLEHALTSAPTDRPLLLFQHHPPFDTGLRYMDTIRLANPEAEWEV CCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHEEECCCCCCCHH IARTRRPDYLFMGHLHRPIAGVWRGIPFHIQRALAHQVAFDLVTEGHIPGSHEAPDYAHV EECCCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE SVEGDRIVIHQRSFLYDGPLFSLHDKAALERAEF EECCCEEEEEECCEEECCCEEECCHHHHHHHCCC >Mature Secondary Structure MKFVVLTDTHFVARGRRIYGLDPAERLRAAIGCINRDHPEIAFVIVTGDLAHWGEDAAYE CEEEEEECCHHHHCCCEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHCCCHHHHH ALAEVLGELRALTILLMGNHDKRDGFARYFPGVPRDADGFVQTMQVFDAATVVTLDTLNE HHHHHHHHHHHEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEHHHH AAPNHEGLLCDARLAFLEHALTSAPTDRPLLLFQHHPPFDTGLRYMDTIRLANPEAEWEV CCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHEEECCCCCCCHH IARTRRPDYLFMGHLHRPIAGVWRGIPFHIQRALAHQVAFDLVTEGHIPGSHEAPDYAHV EECCCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE SVEGDRIVIHQRSFLYDGPLFSLHDKAALERAEF EECCCEEEEEECCEEECCCEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA