Click here to switch to the map view.

The map label for this gene is yggT [C]

Identifier: 86747237

GI number: 86747237

Start: 120565

End: 120924

Strand: Reverse

Name: yggT [C]

Synonym: RPB_0110

Alternate gene names: 86747237

Gene position: 120924-120565 (Counterclockwise)

Preceding gene: 86747238

Following gene: 86747236

Centisome position: 2.27

GC content: 58.89

Gene sequence:

>360_bases
TTGCACGGGCCCGAACCGATATTTACGGGCCAGCCCTTCCGCGTTCGAACCCGCGAGATTTCCACCGCCATGCGCGCCAT
TCTCGACATCGTTCTCATCATTCTCGATCTGTACATCTGGCTGTTGATCGCCTCGGCGATCCTGTCCTGGCTGATCGCCT
TCAACGTCGTGAACACGCGCAACCAGTTCGTCTCCGCAGTGTCGGAATTCCTGTACCGGATCACCGAGCCGCTGCTGGGC
CCGATCCGCCGGATGCTGCCGTCGCTCGGCGGGCTGGATATTTCTCCGATCATCCTGATCCTGCTGATCATGTTCCTGCA
GCGGGTGATCACCTATTACATCTACCCGTCGGTGTTCTGA

Upstream 100 bases:

>100_bases
GCCGGTCAGCGAACGCCGCCATTTACAGTGCCTGATCCGGCCAAGTCAAGGACGTGCCGCGCCGACGGCATCGGGCTTTA
TTTGCCGGGAGTTCCCTTGT

Downstream 100 bases:

>100_bases
GCCACAGATCGCCAGACCCGGAGTTTCCATGGCCGAGGCCTGGCGGTATTCTGCCCAGGGTGTCGCCGTCGCGGTGCGGG
TCACGCCACGCGGCGATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MHGPEPIFTGQPFRVRTREISTAMRAILDIVLIILDLYIWLLIASAILSWLIAFNVVNTRNQFVSAVSEFLYRITEPLLG
PIRRMLPSLGGLDISPIILILLIMFLQRVITYYIYPSVF

Sequences:

>Translated_119_residues
MHGPEPIFTGQPFRVRTREISTAMRAILDIVLIILDLYIWLLIASAILSWLIAFNVVNTRNQFVSAVSEFLYRITEPLLG
PIRRMLPSLGGLDISPIILILLIMFLQRVITYYIYPSVF
>Mature_119_residues
MHGPEPIFTGQPFRVRTREISTAMRAILDIVLIILDLYIWLLIASAILSWLIAFNVVNTRNQFVSAVSEFLYRITEPLLG
PIRRMLPSLGGLDISPIILILLIMFLQRVITYYIYPSVF

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003425 [H]

Pfam domain/function: PF02325 YGGT [H]

EC number: NA

Molecular weight: Translated: 13665; Mature: 13665

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGPEPIFTGQPFRVRTREISTAMRAILDIVLIILDLYIWLLIASAILSWLIAFNVVNTR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQFVSAVSEFLYRITEPLLGPIRRMLPSLGGLDISPIILILLIMFLQRVITYYIYPSVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHGPEPIFTGQPFRVRTREISTAMRAILDIVLIILDLYIWLLIASAILSWLIAFNVVNTR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQFVSAVSEFLYRITEPLLGPIRRMLPSLGGLDISPIILILLIMFLQRVITYYIYPSVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]