Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86609191
Identifier: 86609191
GI number: 86609191
Start: 1815337
End: 1815957
Strand: Reverse
Name: 86609191
Synonym: CYB_1732
Alternate gene names: NA
Gene position: 1815957-1815337 (Counterclockwise)
Preceding gene: 86609192
Following gene: 86609187
Centisome position: 59.6
GC content: 63.61
Gene sequence:
>621_bases ATGATTGGACGACGTCCTACTGTTGCTTCCCAAGGCTGTCGCCAGGACGCCATCGCCCAGGGGCTCAGCCTTCTGCGCCG TTCTTGGGCGCGGTTGGTTTTCGGCGTATTACTCGGCCTCATCTTGGGCGTGGGCTCCACCTTCTGGGCCACCGCTCAGC AGCTCCCTGCCGGACAGCAGCTTATTCCCAATCCGCAGCAGTTTCGCGCCCTAGAGCAGCCCAGCAGCGCCCTCAGCGCG TTGCGAGCCGAACAACTGGCTGCCGAAGCCAATGCCGCCATCCAAGCGCAAAACTACGACCAGGCTGTCGAGCTGCTGCA GCAGGTGTTCAACGCCTACAACCAGCGCTCCAACTACCACCAAGATCTCTCCCGCGCCTTCGCCGGGATCCAAAACCGCA TCTCCGAAGAACAGCGGGAGCTGGCCCGTGTTGCCGCCCAAGCCCGGGATCAAGCTGCCTACGATTTGGCCGTGGTCTAC CGCGCCGCCGGGCGACCGGAAGAGGCCGTGGGCTGGCTGATCCAGGTCATCAACAGCCAGAGCCCAACCCGCGAGCTGGG CACCCAAGCCTACCAGCAGCTCTTGGAAATCGGCTTCGTCAGCACTCCCTTCCCCAGCTAG
Upstream 100 bases:
>100_bases CTCCCAGCCTCGCTCCAAAGGGATCCCTGAGCTGCAGCAAAGACCCGAGGAGTAGGGTAGAGTGGAACGGGTCAAAAAAG GTTTTGGGGGTTACCCGCAC
Downstream 100 bases:
>100_bases AGCTGCTCTTCCAGATTGCGATAGAAAGCCAGCGCCGTTTGCCCATAGGTTCGTTGGTCAAAGCGCAGCAGGGATCCCAC CTGGTCTGGTAGCTTCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MIGRRPTVASQGCRQDAIAQGLSLLRRSWARLVFGVLLGLILGVGSTFWATAQQLPAGQQLIPNPQQFRALEQPSSALSA LRAEQLAAEANAAIQAQNYDQAVELLQQVFNAYNQRSNYHQDLSRAFAGIQNRISEEQRELARVAAQARDQAAYDLAVVY RAAGRPEEAVGWLIQVINSQSPTRELGTQAYQQLLEIGFVSTPFPS
Sequences:
>Translated_206_residues MIGRRPTVASQGCRQDAIAQGLSLLRRSWARLVFGVLLGLILGVGSTFWATAQQLPAGQQLIPNPQQFRALEQPSSALSA LRAEQLAAEANAAIQAQNYDQAVELLQQVFNAYNQRSNYHQDLSRAFAGIQNRISEEQRELARVAAQARDQAAYDLAVVY RAAGRPEEAVGWLIQVINSQSPTRELGTQAYQQLLEIGFVSTPFPS >Mature_206_residues MIGRRPTVASQGCRQDAIAQGLSLLRRSWARLVFGVLLGLILGVGSTFWATAQQLPAGQQLIPNPQQFRALEQPSSALSA LRAEQLAAEANAAIQAQNYDQAVELLQQVFNAYNQRSNYHQDLSRAFAGIQNRISEEQRELARVAAQARDQAAYDLAVVY RAAGRPEEAVGWLIQVINSQSPTRELGTQAYQQLLEIGFVSTPFPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22621; Mature: 22621
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRRPTVASQGCRQDAIAQGLSLLRRSWARLVFGVLLGLILGVGSTFWATAQQLPAGQQ CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC LIPNPQQFRALEQPSSALSALRAEQLAAEANAAIQAQNYDQAVELLQQVFNAYNQRSNYH CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHH QDLSRAFAGIQNRISEEQRELARVAAQARDQAAYDLAVVYRAAGRPEEAVGWLIQVINSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC SPTRELGTQAYQQLLEIGFVSTPFPS CCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIGRRPTVASQGCRQDAIAQGLSLLRRSWARLVFGVLLGLILGVGSTFWATAQQLPAGQQ CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC LIPNPQQFRALEQPSSALSALRAEQLAAEANAAIQAQNYDQAVELLQQVFNAYNQRSNYH CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHH QDLSRAFAGIQNRISEEQRELARVAAQARDQAAYDLAVVYRAAGRPEEAVGWLIQVINSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC SPTRELGTQAYQQLLEIGFVSTPFPS CCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA