Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86609187
Identifier: 86609187
GI number: 86609187
Start: 1812114
End: 1812728
Strand: Reverse
Name: 86609187
Synonym: CYB_1729
Alternate gene names: NA
Gene position: 1812728-1812114 (Counterclockwise)
Preceding gene: 86609191
Following gene: 86609186
Centisome position: 59.5
GC content: 47.8
Gene sequence:
>615_bases ATGACCACTGCCCTCGCCCCCCGTAAAACCCACACTTCAGAGGAATACTTTGCCCTGGAAGCTGAATCAGAGGCCACAGG CGGGATCCGCCGTGAATTTCGCAATGGGGAAATTATTGAGATAACTGGCGGCACACCCATTCATAGCCAACTGATTACCA GTGTCAATGCCCTACTTTGGCTTAAGCTAAGAGGCAAGGGTTTTTCCGTTTTTTCTAGTGATCTCAGACTTTACATACCT GCCTTCGAACAATATGTCTATCCCGATGGTATGGTGATCCAAAACCCAGTTCAGCTTAAAGAAGGGAGCAAGGATACTGT CACTAACCCTATCTTAATTGTGGAAGTGCTCTCGCCTGCCACCGAAAGCTACGATAGAGGAGCGAAGTTTGCTGCCTATC GCTCTCTCCCAACTTTACAGGAGTATCTGCTAATTGACCAAGCTCGAATCAGTGTAGAACACTACCGCCGCCAGGGAAAT GTCGAGTGGATCTTCAGGGACTACCATGCCCTGGATGATGTTGTTACGCTGCCATCTGTCAACATCACTTTTTCCCTGGC AGACATTTACGGTGATATTGAATTAGAGCAAGATTCAAATGCAACACGCTCCTGA
Upstream 100 bases:
>100_bases GGCTGCACTTGCGACCGAGAGAACCCGAAGGCCACCGCGTCGAGCTTCTCGACACCCGACTGACCGTTTGAGCCATTCTG CCGCTGCCTGAGGAGATGCC
Downstream 100 bases:
>100_bases CAAGAACCTACTCCCCCACTTGAAACGTAGATGAGGCAAGTTGGGAATGCCTGAAGTGATTCTGCTAGATATCTACATCC GGCTCTGGCTAGGGTTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTTALAPRKTHTSEEYFALEAESEATGGIRREFRNGEIIEITGGTPIHSQLITSVNALLWLKLRGKGFSVFSSDLRLYIP AFEQYVYPDGMVIQNPVQLKEGSKDTVTNPILIVEVLSPATESYDRGAKFAAYRSLPTLQEYLLIDQARISVEHYRRQGN VEWIFRDYHALDDVVTLPSVNITFSLADIYGDIELEQDSNATRS
Sequences:
>Translated_204_residues MTTALAPRKTHTSEEYFALEAESEATGGIRREFRNGEIIEITGGTPIHSQLITSVNALLWLKLRGKGFSVFSSDLRLYIP AFEQYVYPDGMVIQNPVQLKEGSKDTVTNPILIVEVLSPATESYDRGAKFAAYRSLPTLQEYLLIDQARISVEHYRRQGN VEWIFRDYHALDDVVTLPSVNITFSLADIYGDIELEQDSNATRS >Mature_203_residues TTALAPRKTHTSEEYFALEAESEATGGIRREFRNGEIIEITGGTPIHSQLITSVNALLWLKLRGKGFSVFSSDLRLYIPA FEQYVYPDGMVIQNPVQLKEGSKDTVTNPILIVEVLSPATESYDRGAKFAAYRSLPTLQEYLLIDQARISVEHYRRQGNV EWIFRDYHALDDVVTLPSVNITFSLADIYGDIELEQDSNATRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To Synechocystis PCC 6803 slr1290 and sll0925 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008538 - InterPro: IPR012296 - InterPro: IPR011335 [H]
Pfam domain/function: PF05685 DUF820 [H]
EC number: NA
Molecular weight: Translated: 22992; Mature: 22861
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTALAPRKTHTSEEYFALEAESEATGGIRREFRNGEIIEITGGTPIHSQLITSVNALLW CCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHCEEEE LKLRGKGFSVFSSDLRLYIPAFEQYVYPDGMVIQNPVQLKEGSKDTVTNPILIVEVLSPA EEECCCCCEEEECCEEEEEECHHHHCCCCCEEEECCHHCCCCCCCCCCCCEEEEEECCCC TESYDRGAKFAAYRSLPTLQEYLLIDQARISVEHYRRQGNVEWIFRDYHALDDVVTLPSV HHHHHCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCEEECCCC NITFSLADIYGDIELEQDSNATRS EEEEEEEHEEEEEEEECCCCCCCC >Mature Secondary Structure TTALAPRKTHTSEEYFALEAESEATGGIRREFRNGEIIEITGGTPIHSQLITSVNALLW CCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHCEEEE LKLRGKGFSVFSSDLRLYIPAFEQYVYPDGMVIQNPVQLKEGSKDTVTNPILIVEVLSPA EEECCCCCEEEECCEEEEEECHHHHCCCCCEEEECCHHCCCCCCCCCCCCEEEEEECCCC TESYDRGAKFAAYRSLPTLQEYLLIDQARISVEHYRRQGNVEWIFRDYHALDDVVTLPSV HHHHHCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCEEECCCC NITFSLADIYGDIELEQDSNATRS EEEEEEEHEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]