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The map label for this gene is rpsF

Identifier: 86609124

GI number: 86609124

Start: 1743827

End: 1744117

Strand: Reverse

Name: rpsF

Synonym: CYB_1664

Alternate gene names: 86609124

Gene position: 1744117-1743827 (Counterclockwise)

Preceding gene: 86609129

Following gene: 86609123

Centisome position: 57.25

GC content: 54.98

Gene sequence:

>291_bases
ATGCCCCGCGCTTACGAAACGATGCTGATTGTGCGTCCTGATCTGTCAGATGAACCCCTCGAACAACTGCTCAGCAGTCA
GGAGGCAATCCTGCGAGAGAACGGAGTAACCCACGTGGAGATTACCAATAGGGGCAAGCGCCGCTTTGCCGGGTTTGAGA
TGAAAAAGTTCAAGGAAGGTCTGTACATCCAGTTCAACTACGAAGCCGAACCCAATGCGGTGGCTGCCTGGGAGAAAAAC
CTGCGCATCAACGAGAGTGTGCTGCGCCACATGACTCTCCGCGTCGGCTAG

Upstream 100 bases:

>100_bases
AGGTGTGGGGATTGAGCCGCGGCCTTTTCGGTTGTGGGAAAGAAAAGCTAGTATAGTCCACTGCGTCTCTACCACTGGAT
TCTAAGGAGAACTTGCTTCC

Downstream 100 bases:

>100_bases
GTTTGACGGCATCCTGGCCTGCGGGCATGATGGAAGTGCCCTGAGCTGCCCCTTATCCCTGGATGGCTCCGTTATGAACT
CGATTGTGTTGATGGGCGAG

Product: 30S ribosomal protein S6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MPRAYETMLIVRPDLSDEPLEQLLSSQEAILRENGVTHVEITNRGKRRFAGFEMKKFKEGLYIQFNYEAEPNAVAAWEKN
LRINESVLRHMTLRVG

Sequences:

>Translated_96_residues
MPRAYETMLIVRPDLSDEPLEQLLSSQEAILRENGVTHVEITNRGKRRFAGFEMKKFKEGLYIQFNYEAEPNAVAAWEKN
LRINESVLRHMTLRVG
>Mature_95_residues
PRAYETMLIVRPDLSDEPLEQLLSSQEAILRENGVTHVEITNRGKRRFAGFEMKKFKEGLYIQFNYEAEPNAVAAWEKNL
RINESVLRHMTLRVG

Specific function: Binds together with S18 to 16S ribosomal RNA

COG id: COG0360

COG function: function code J; Ribosomal protein S6

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S6P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS6_SYNJB (Q2JKZ9)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_477886.1
- ProteinModelPortal:   Q2JKZ9
- SMR:   Q2JKZ9
- STRING:   Q2JKZ9
- GeneID:   3901879
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_1664
- TIGR:   CYB_1664
- eggNOG:   COG0360
- HOGENOM:   HBG747554
- OMA:   NLRINES
- ProtClustDB:   PRK00453
- BioCyc:   SSP321332:CYB_1664-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00360
- InterPro:   IPR000529
- InterPro:   IPR020814
- InterPro:   IPR014717
- Gene3D:   G3DSA:3.30.70.60
- TIGRFAMs:   TIGR00166

Pfam domain/function: PF01250 Ribosomal_S6; SSF54995 Ribosomal_S6

EC number: NA

Molecular weight: Translated: 11193; Mature: 11062

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS01048 RIBOSOMAL_S6

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRAYETMLIVRPDLSDEPLEQLLSSQEAILRENGVTHVEITNRGKRRFAGFEMKKFKEG
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHCCC
LYIQFNYEAEPNAVAAWEKNLRINESVLRHMTLRVG
EEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
PRAYETMLIVRPDLSDEPLEQLLSSQEAILRENGVTHVEITNRGKRRFAGFEMKKFKEG
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHCCC
LYIQFNYEAEPNAVAAWEKNLRINESVLRHMTLRVG
EEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA