Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
---|---|
Accession | NC_007776 |
Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86609107
Identifier: 86609107
GI number: 86609107
Start: 1719273
End: 1719872
Strand: Reverse
Name: 86609107
Synonym: CYB_1647
Alternate gene names: NA
Gene position: 1719872-1719273 (Counterclockwise)
Preceding gene: 86609108
Following gene: 86609103
Centisome position: 56.45
GC content: 61.67
Gene sequence:
>600_bases ATGAGTCCGTATCAGGTGTTGGGAATTAGCGAAGAAGCCTCTTTTGAAGAGATTCAATCGGCGCGGGCTCGGCTCCTGGC CAGCTTGGGCGCCGATGAACAGCAGCAAGAGCGGGTGGAGCAAGCCTACGATGCCATCCTGATGCAGCGCCTGCGCCTGC GCAAAGAGGGCAAAATCGCCGTTCCCGATCGCATTCGCTACGCCGAACAACGGGCTGCCCATCCTGAGCCGGAGCTGAGT TTGCCTCGCCCTGCTGCCCAAAATCCCCCCTGGGTCAGCCGCTGGTTGGATACCCCCTCTACCGCCGATGCCCTCTGGCC TGCGGCGCTGCTGGGTGGGCTGGGGGGTTGGGTTATCCTGGCTCCCGATGAGTACCCCTCGCTGCAACTGGCCTTGGGGC TGATGGCTTGTATCTATTTCCTGTACCGCAAAGAGCGCCGCTTCATTCGCGCTTTTCTCTTGGCCCTGGCGGGCCTGAGC CTGGGGCTGATGTTGGCCTACGGCATTGCCCTTCCTCTCACCGGTGGCGATGCTCCTGGTGCGCTGTTGGTGGGGATCAC GTTTACGGTGATGTGGTTGGTGACCAGCTTTCTGCGCTAG
Upstream 100 bases:
>100_bases CTCAATCCCCGTTGTCGATCCCCGTCACGTAGCCGGATCGAAGGTCGGGCAGGCTGGGTTAAGGTGATAAAGAGTTACAG GGCTGGTCGCTATGGCTGAG
Downstream 100 bases:
>100_bases CTGCCGGTTGGCAACGGATATCCAACCAGGGATCATCCTCACCTGCCAAACCGCCGCTGCCGCGACTGATAGCTAAGCAA GGCTTGGTGAAAAGCGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSPYQVLGISEEASFEEIQSARARLLASLGADEQQQERVEQAYDAILMQRLRLRKEGKIAVPDRIRYAEQRAAHPEPELS LPRPAAQNPPWVSRWLDTPSTADALWPAALLGGLGGWVILAPDEYPSLQLALGLMACIYFLYRKERRFIRAFLLALAGLS LGLMLAYGIALPLTGGDAPGALLVGITFTVMWLVTSFLR
Sequences:
>Translated_199_residues MSPYQVLGISEEASFEEIQSARARLLASLGADEQQQERVEQAYDAILMQRLRLRKEGKIAVPDRIRYAEQRAAHPEPELS LPRPAAQNPPWVSRWLDTPSTADALWPAALLGGLGGWVILAPDEYPSLQLALGLMACIYFLYRKERRFIRAFLLALAGLS LGLMLAYGIALPLTGGDAPGALLVGITFTVMWLVTSFLR >Mature_198_residues SPYQVLGISEEASFEEIQSARARLLASLGADEQQQERVEQAYDAILMQRLRLRKEGKIAVPDRIRYAEQRAAHPEPELSL PRPAAQNPPWVSRWLDTPSTADALWPAALLGGLGGWVILAPDEYPSLQLALGLMACIYFLYRKERRFIRAFLLALAGLSL GLMLAYGIALPLTGGDAPGALLVGITFTVMWLVTSFLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21992; Mature: 21861
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPYQVLGISEEASFEEIQSARARLLASLGADEQQQERVEQAYDAILMQRLRLRKEGKIA CCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC VPDRIRYAEQRAAHPEPELSLPRPAAQNPPWVSRWLDTPSTADALWPAALLGGLGGWVIL CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCEEEE APDEYPSLQLALGLMACIYFLYRKERRFIRAFLLALAGLSLGLMLAYGIALPLTGGDAPG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ALLVGITFTVMWLVTSFLR HHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SPYQVLGISEEASFEEIQSARARLLASLGADEQQQERVEQAYDAILMQRLRLRKEGKIA CCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC VPDRIRYAEQRAAHPEPELSLPRPAAQNPPWVSRWLDTPSTADALWPAALLGGLGGWVIL CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCEEEE APDEYPSLQLALGLMACIYFLYRKERRFIRAFLLALAGLSLGLMLAYGIALPLTGGDAPG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ALLVGITFTVMWLVTSFLR HHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA