Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609107

Identifier: 86609107

GI number: 86609107

Start: 1719273

End: 1719872

Strand: Reverse

Name: 86609107

Synonym: CYB_1647

Alternate gene names: NA

Gene position: 1719872-1719273 (Counterclockwise)

Preceding gene: 86609108

Following gene: 86609103

Centisome position: 56.45

GC content: 61.67

Gene sequence:

>600_bases
ATGAGTCCGTATCAGGTGTTGGGAATTAGCGAAGAAGCCTCTTTTGAAGAGATTCAATCGGCGCGGGCTCGGCTCCTGGC
CAGCTTGGGCGCCGATGAACAGCAGCAAGAGCGGGTGGAGCAAGCCTACGATGCCATCCTGATGCAGCGCCTGCGCCTGC
GCAAAGAGGGCAAAATCGCCGTTCCCGATCGCATTCGCTACGCCGAACAACGGGCTGCCCATCCTGAGCCGGAGCTGAGT
TTGCCTCGCCCTGCTGCCCAAAATCCCCCCTGGGTCAGCCGCTGGTTGGATACCCCCTCTACCGCCGATGCCCTCTGGCC
TGCGGCGCTGCTGGGTGGGCTGGGGGGTTGGGTTATCCTGGCTCCCGATGAGTACCCCTCGCTGCAACTGGCCTTGGGGC
TGATGGCTTGTATCTATTTCCTGTACCGCAAAGAGCGCCGCTTCATTCGCGCTTTTCTCTTGGCCCTGGCGGGCCTGAGC
CTGGGGCTGATGTTGGCCTACGGCATTGCCCTTCCTCTCACCGGTGGCGATGCTCCTGGTGCGCTGTTGGTGGGGATCAC
GTTTACGGTGATGTGGTTGGTGACCAGCTTTCTGCGCTAG

Upstream 100 bases:

>100_bases
CTCAATCCCCGTTGTCGATCCCCGTCACGTAGCCGGATCGAAGGTCGGGCAGGCTGGGTTAAGGTGATAAAGAGTTACAG
GGCTGGTCGCTATGGCTGAG

Downstream 100 bases:

>100_bases
CTGCCGGTTGGCAACGGATATCCAACCAGGGATCATCCTCACCTGCCAAACCGCCGCTGCCGCGACTGATAGCTAAGCAA
GGCTTGGTGAAAAGCGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSPYQVLGISEEASFEEIQSARARLLASLGADEQQQERVEQAYDAILMQRLRLRKEGKIAVPDRIRYAEQRAAHPEPELS
LPRPAAQNPPWVSRWLDTPSTADALWPAALLGGLGGWVILAPDEYPSLQLALGLMACIYFLYRKERRFIRAFLLALAGLS
LGLMLAYGIALPLTGGDAPGALLVGITFTVMWLVTSFLR

Sequences:

>Translated_199_residues
MSPYQVLGISEEASFEEIQSARARLLASLGADEQQQERVEQAYDAILMQRLRLRKEGKIAVPDRIRYAEQRAAHPEPELS
LPRPAAQNPPWVSRWLDTPSTADALWPAALLGGLGGWVILAPDEYPSLQLALGLMACIYFLYRKERRFIRAFLLALAGLS
LGLMLAYGIALPLTGGDAPGALLVGITFTVMWLVTSFLR
>Mature_198_residues
SPYQVLGISEEASFEEIQSARARLLASLGADEQQQERVEQAYDAILMQRLRLRKEGKIAVPDRIRYAEQRAAHPEPELSL
PRPAAQNPPWVSRWLDTPSTADALWPAALLGGLGGWVILAPDEYPSLQLALGLMACIYFLYRKERRFIRAFLLALAGLSL
GLMLAYGIALPLTGGDAPGALLVGITFTVMWLVTSFLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21992; Mature: 21861

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPYQVLGISEEASFEEIQSARARLLASLGADEQQQERVEQAYDAILMQRLRLRKEGKIA
CCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VPDRIRYAEQRAAHPEPELSLPRPAAQNPPWVSRWLDTPSTADALWPAALLGGLGGWVIL
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCEEEE
APDEYPSLQLALGLMACIYFLYRKERRFIRAFLLALAGLSLGLMLAYGIALPLTGGDAPG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ALLVGITFTVMWLVTSFLR
HHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SPYQVLGISEEASFEEIQSARARLLASLGADEQQQERVEQAYDAILMQRLRLRKEGKIA
CCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VPDRIRYAEQRAAHPEPELSLPRPAAQNPPWVSRWLDTPSTADALWPAALLGGLGGWVIL
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCEEEE
APDEYPSLQLALGLMACIYFLYRKERRFIRAFLLALAGLSLGLMLAYGIALPLTGGDAPG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ALLVGITFTVMWLVTSFLR
HHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA