Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86609057
Identifier: 86609057
GI number: 86609057
Start: 1664148
End: 1665416
Strand: Reverse
Name: 86609057
Synonym: CYB_1592
Alternate gene names: NA
Gene position: 1665416-1664148 (Counterclockwise)
Preceding gene: 86609059
Following gene: 86609041
Centisome position: 54.66
GC content: 55.79
Gene sequence:
>1269_bases ATGGCAGAGAAAGTTGTGTCCAACCCCGTACAGGCGCAGTTTGACGAGTTTCCCTACCCGAATGTGCCGATTGAGCAGAC GGTTACCGACAACCTTGCCTTGTTTGCCAACAGCCTTACGACGGCCAGGTACCTGCGGGATCGCAAGGTGGTATTGCCGG AAGGCAAGGTGATGCTCAATGCCGGCTGTGGCTCCGGTTGGGAAACTTTGGTTTTGGCAACGGCCAACCCCGGCGCTCGC TATGTGGGTGTGGATATTTCGCCGGAGTCCATCAAGATGGCAGAGCAGCGCTTTAAGTTCCATAAGATTGAAAACGCCCG CTTTCATGTTATGGACATTACCGACATGACGGCGCTGGGGGAGGAGTTTGATTTTATTGCCTGCAACGACGTTCTCTACC TACTGGACGACCCGGTTGCCGGTTTGAAAGGCATGCGGCAGGTGCTCAAGCCCGATGGGATCATCCGCACCAATGTTCAT AGCCTTTATCAGCGGCAGTTTATCTTCAACATGCAGGATGCGATGGAGCTGCTGGGGGTGATGGACGAGCCGGCAGCCAA AGCGGTGCCCCTGCTACGAGAGGTGATGGAAGCGCTCACCGACGCCAGCTTTGTGAAGAGCCACTGGAACGGCGATGCCA TCAAAACCACAGCGGGGATCCTGGCCAACTTCCTGCTGCGCAGCGACAAGGGCTTTACGGTGCCGCAGGTGTTTGAGATG TTGAGGCAGGCCGGCCTCGAGTTTATTAGCATGGTGAATTGGCAGCAGTGGAAGTTGGAGAGGGTCTTGACCAAGCCGGT GCCCTACTCGATGCGGCAACTCAATAAGTTAAGCGAGGAGCAAAAGCTTCACTTCATCGAGCTGATTTTCCCCAACATGA CCCGCTTGATCGACTTTTGGTGTGGGCACCCCGGCATTCCCAAGGCTGAGCCGTTTACGAACGACGAATGGTGGAACGGC ACGGTGCAAGCCCACCCCCTTCTGGTGAAGTTGGATGCCAAGCAGGCTTTTCTCAACGCCATTCGGGACAACGGGCCTGT CAACATCAACGGCTGGCCGGGAGCTGAGGGGAACATTACCATCGATCCTTTCTCGGTGCGCTGGCTGGTGGATGTCTTCG GCCCCTTGCCGGTGCCGGTGCAATCTCTAGTCCACAAGACCATGGAGATTATGGACTGGACGCAGGAAGAAGCGTTTAGT CAAGTGTTGGCCAACCTGAAGTTTTTGGAAGAACGCCTGGTCATTCTGCTGGATTCCCCACTTCGCTAG
Upstream 100 bases:
>100_bases CCTCAGGCTTTTCTGGATTTGCCTCAGTCTTTTGCTTGCTGTGCAGTACGATAGGGTGCGTGCTAAGAGTGTTGGGATAC CCAAAAACAGGAAGACTGCC
Downstream 100 bases:
>100_bases GCAAGTGCAAAGCCAGGACTTACGAAAGCCCCCCTGATTCATACATGGGGGCCTTTTTGGTTGACATACCCCCCGCCCTA AAGGACGGGGATTCTTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MAEKVVSNPVQAQFDEFPYPNVPIEQTVTDNLALFANSLTTARYLRDRKVVLPEGKVMLNAGCGSGWETLVLATANPGAR YVGVDISPESIKMAEQRFKFHKIENARFHVMDITDMTALGEEFDFIACNDVLYLLDDPVAGLKGMRQVLKPDGIIRTNVH SLYQRQFIFNMQDAMELLGVMDEPAAKAVPLLREVMEALTDASFVKSHWNGDAIKTTAGILANFLLRSDKGFTVPQVFEM LRQAGLEFISMVNWQQWKLERVLTKPVPYSMRQLNKLSEEQKLHFIELIFPNMTRLIDFWCGHPGIPKAEPFTNDEWWNG TVQAHPLLVKLDAKQAFLNAIRDNGPVNINGWPGAEGNITIDPFSVRWLVDVFGPLPVPVQSLVHKTMEIMDWTQEEAFS QVLANLKFLEERLVILLDSPLR
Sequences:
>Translated_422_residues MAEKVVSNPVQAQFDEFPYPNVPIEQTVTDNLALFANSLTTARYLRDRKVVLPEGKVMLNAGCGSGWETLVLATANPGAR YVGVDISPESIKMAEQRFKFHKIENARFHVMDITDMTALGEEFDFIACNDVLYLLDDPVAGLKGMRQVLKPDGIIRTNVH SLYQRQFIFNMQDAMELLGVMDEPAAKAVPLLREVMEALTDASFVKSHWNGDAIKTTAGILANFLLRSDKGFTVPQVFEM LRQAGLEFISMVNWQQWKLERVLTKPVPYSMRQLNKLSEEQKLHFIELIFPNMTRLIDFWCGHPGIPKAEPFTNDEWWNG TVQAHPLLVKLDAKQAFLNAIRDNGPVNINGWPGAEGNITIDPFSVRWLVDVFGPLPVPVQSLVHKTMEIMDWTQEEAFS QVLANLKFLEERLVILLDSPLR >Mature_421_residues AEKVVSNPVQAQFDEFPYPNVPIEQTVTDNLALFANSLTTARYLRDRKVVLPEGKVMLNAGCGSGWETLVLATANPGARY VGVDISPESIKMAEQRFKFHKIENARFHVMDITDMTALGEEFDFIACNDVLYLLDDPVAGLKGMRQVLKPDGIIRTNVHS LYQRQFIFNMQDAMELLGVMDEPAAKAVPLLREVMEALTDASFVKSHWNGDAIKTTAGILANFLLRSDKGFTVPQVFEML RQAGLEFISMVNWQQWKLERVLTKPVPYSMRQLNKLSEEQKLHFIELIFPNMTRLIDFWCGHPGIPKAEPFTNDEWWNGT VQAHPLLVKLDAKQAFLNAIRDNGPVNINGWPGAEGNITIDPFSVRWLVDVFGPLPVPVQSLVHKTMEIMDWTQEEAFSQ VLANLKFLEERLVILLDSPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2067c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 47784; Mature: 47653
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKVVSNPVQAQFDEFPYPNVPIEQTVTDNLALFANSLTTARYLRDRKVVLPEGKVMLN CCCCHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEE AGCGSGWETLVLATANPGARYVGVDISPESIKMAEQRFKFHKIENARFHVMDITDMTALG CCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHEECCCEEEEEECHHHHHHC EEFDFIACNDVLYLLDDPVAGLKGMRQVLKPDGIIRTNVHSLYQRQFIFNMQDAMELLGV CCCCEEEECCEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCHHHHHHHHHC MDEPAAKAVPLLREVMEALTDASFVKSHWNGDAIKTTAGILANFLLRSDKGFTVPQVFEM CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH LRQAGLEFISMVNWQQWKLERVLTKPVPYSMRQLNKLSEEQKLHFIELIFPNMTRLIDFW HHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHH CGHPGIPKAEPFTNDEWWNGTVQAHPLLVKLDAKQAFLNAIRDNGPVNINGWPGAEGNIT CCCCCCCCCCCCCCCCCCCCEEEECEEEEEECHHHHHHHHHHCCCCEEECCCCCCCCCEE IDPFSVRWLVDVFGPLPVPVQSLVHKTMEIMDWTQEEAFSQVLANLKFLEERLVILLDSP ECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC LR CC >Mature Secondary Structure AEKVVSNPVQAQFDEFPYPNVPIEQTVTDNLALFANSLTTARYLRDRKVVLPEGKVMLN CCCHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEE AGCGSGWETLVLATANPGARYVGVDISPESIKMAEQRFKFHKIENARFHVMDITDMTALG CCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHEECCCEEEEEECHHHHHHC EEFDFIACNDVLYLLDDPVAGLKGMRQVLKPDGIIRTNVHSLYQRQFIFNMQDAMELLGV CCCCEEEECCEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCHHHHHHHHHC MDEPAAKAVPLLREVMEALTDASFVKSHWNGDAIKTTAGILANFLLRSDKGFTVPQVFEM CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH LRQAGLEFISMVNWQQWKLERVLTKPVPYSMRQLNKLSEEQKLHFIELIFPNMTRLIDFW HHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHH CGHPGIPKAEPFTNDEWWNGTVQAHPLLVKLDAKQAFLNAIRDNGPVNINGWPGAEGNIT CCCCCCCCCCCCCCCCCCCCEEEECEEEEEECHHHHHHHHHHCCCCEEECCCCCCCCCEE IDPFSVRWLVDVFGPLPVPVQSLVHKTMEIMDWTQEEAFSQVLANLKFLEERLVILLDSP ECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC LR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3041005; 1901865 [H]