Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609057

Identifier: 86609057

GI number: 86609057

Start: 1664148

End: 1665416

Strand: Reverse

Name: 86609057

Synonym: CYB_1592

Alternate gene names: NA

Gene position: 1665416-1664148 (Counterclockwise)

Preceding gene: 86609059

Following gene: 86609041

Centisome position: 54.66

GC content: 55.79

Gene sequence:

>1269_bases
ATGGCAGAGAAAGTTGTGTCCAACCCCGTACAGGCGCAGTTTGACGAGTTTCCCTACCCGAATGTGCCGATTGAGCAGAC
GGTTACCGACAACCTTGCCTTGTTTGCCAACAGCCTTACGACGGCCAGGTACCTGCGGGATCGCAAGGTGGTATTGCCGG
AAGGCAAGGTGATGCTCAATGCCGGCTGTGGCTCCGGTTGGGAAACTTTGGTTTTGGCAACGGCCAACCCCGGCGCTCGC
TATGTGGGTGTGGATATTTCGCCGGAGTCCATCAAGATGGCAGAGCAGCGCTTTAAGTTCCATAAGATTGAAAACGCCCG
CTTTCATGTTATGGACATTACCGACATGACGGCGCTGGGGGAGGAGTTTGATTTTATTGCCTGCAACGACGTTCTCTACC
TACTGGACGACCCGGTTGCCGGTTTGAAAGGCATGCGGCAGGTGCTCAAGCCCGATGGGATCATCCGCACCAATGTTCAT
AGCCTTTATCAGCGGCAGTTTATCTTCAACATGCAGGATGCGATGGAGCTGCTGGGGGTGATGGACGAGCCGGCAGCCAA
AGCGGTGCCCCTGCTACGAGAGGTGATGGAAGCGCTCACCGACGCCAGCTTTGTGAAGAGCCACTGGAACGGCGATGCCA
TCAAAACCACAGCGGGGATCCTGGCCAACTTCCTGCTGCGCAGCGACAAGGGCTTTACGGTGCCGCAGGTGTTTGAGATG
TTGAGGCAGGCCGGCCTCGAGTTTATTAGCATGGTGAATTGGCAGCAGTGGAAGTTGGAGAGGGTCTTGACCAAGCCGGT
GCCCTACTCGATGCGGCAACTCAATAAGTTAAGCGAGGAGCAAAAGCTTCACTTCATCGAGCTGATTTTCCCCAACATGA
CCCGCTTGATCGACTTTTGGTGTGGGCACCCCGGCATTCCCAAGGCTGAGCCGTTTACGAACGACGAATGGTGGAACGGC
ACGGTGCAAGCCCACCCCCTTCTGGTGAAGTTGGATGCCAAGCAGGCTTTTCTCAACGCCATTCGGGACAACGGGCCTGT
CAACATCAACGGCTGGCCGGGAGCTGAGGGGAACATTACCATCGATCCTTTCTCGGTGCGCTGGCTGGTGGATGTCTTCG
GCCCCTTGCCGGTGCCGGTGCAATCTCTAGTCCACAAGACCATGGAGATTATGGACTGGACGCAGGAAGAAGCGTTTAGT
CAAGTGTTGGCCAACCTGAAGTTTTTGGAAGAACGCCTGGTCATTCTGCTGGATTCCCCACTTCGCTAG

Upstream 100 bases:

>100_bases
CCTCAGGCTTTTCTGGATTTGCCTCAGTCTTTTGCTTGCTGTGCAGTACGATAGGGTGCGTGCTAAGAGTGTTGGGATAC
CCAAAAACAGGAAGACTGCC

Downstream 100 bases:

>100_bases
GCAAGTGCAAAGCCAGGACTTACGAAAGCCCCCCTGATTCATACATGGGGGCCTTTTTGGTTGACATACCCCCCGCCCTA
AAGGACGGGGATTCTTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MAEKVVSNPVQAQFDEFPYPNVPIEQTVTDNLALFANSLTTARYLRDRKVVLPEGKVMLNAGCGSGWETLVLATANPGAR
YVGVDISPESIKMAEQRFKFHKIENARFHVMDITDMTALGEEFDFIACNDVLYLLDDPVAGLKGMRQVLKPDGIIRTNVH
SLYQRQFIFNMQDAMELLGVMDEPAAKAVPLLREVMEALTDASFVKSHWNGDAIKTTAGILANFLLRSDKGFTVPQVFEM
LRQAGLEFISMVNWQQWKLERVLTKPVPYSMRQLNKLSEEQKLHFIELIFPNMTRLIDFWCGHPGIPKAEPFTNDEWWNG
TVQAHPLLVKLDAKQAFLNAIRDNGPVNINGWPGAEGNITIDPFSVRWLVDVFGPLPVPVQSLVHKTMEIMDWTQEEAFS
QVLANLKFLEERLVILLDSPLR

Sequences:

>Translated_422_residues
MAEKVVSNPVQAQFDEFPYPNVPIEQTVTDNLALFANSLTTARYLRDRKVVLPEGKVMLNAGCGSGWETLVLATANPGAR
YVGVDISPESIKMAEQRFKFHKIENARFHVMDITDMTALGEEFDFIACNDVLYLLDDPVAGLKGMRQVLKPDGIIRTNVH
SLYQRQFIFNMQDAMELLGVMDEPAAKAVPLLREVMEALTDASFVKSHWNGDAIKTTAGILANFLLRSDKGFTVPQVFEM
LRQAGLEFISMVNWQQWKLERVLTKPVPYSMRQLNKLSEEQKLHFIELIFPNMTRLIDFWCGHPGIPKAEPFTNDEWWNG
TVQAHPLLVKLDAKQAFLNAIRDNGPVNINGWPGAEGNITIDPFSVRWLVDVFGPLPVPVQSLVHKTMEIMDWTQEEAFS
QVLANLKFLEERLVILLDSPLR
>Mature_421_residues
AEKVVSNPVQAQFDEFPYPNVPIEQTVTDNLALFANSLTTARYLRDRKVVLPEGKVMLNAGCGSGWETLVLATANPGARY
VGVDISPESIKMAEQRFKFHKIENARFHVMDITDMTALGEEFDFIACNDVLYLLDDPVAGLKGMRQVLKPDGIIRTNVHS
LYQRQFIFNMQDAMELLGVMDEPAAKAVPLLREVMEALTDASFVKSHWNGDAIKTTAGILANFLLRSDKGFTVPQVFEML
RQAGLEFISMVNWQQWKLERVLTKPVPYSMRQLNKLSEEQKLHFIELIFPNMTRLIDFWCGHPGIPKAEPFTNDEWWNGT
VQAHPLLVKLDAKQAFLNAIRDNGPVNINGWPGAEGNITIDPFSVRWLVDVFGPLPVPVQSLVHKTMEIMDWTQEEAFSQ
VLANLKFLEERLVILLDSPLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2067c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 47784; Mature: 47653

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKVVSNPVQAQFDEFPYPNVPIEQTVTDNLALFANSLTTARYLRDRKVVLPEGKVMLN
CCCCHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEE
AGCGSGWETLVLATANPGARYVGVDISPESIKMAEQRFKFHKIENARFHVMDITDMTALG
CCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHEECCCEEEEEECHHHHHHC
EEFDFIACNDVLYLLDDPVAGLKGMRQVLKPDGIIRTNVHSLYQRQFIFNMQDAMELLGV
CCCCEEEECCEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCHHHHHHHHHC
MDEPAAKAVPLLREVMEALTDASFVKSHWNGDAIKTTAGILANFLLRSDKGFTVPQVFEM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LRQAGLEFISMVNWQQWKLERVLTKPVPYSMRQLNKLSEEQKLHFIELIFPNMTRLIDFW
HHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHH
CGHPGIPKAEPFTNDEWWNGTVQAHPLLVKLDAKQAFLNAIRDNGPVNINGWPGAEGNIT
CCCCCCCCCCCCCCCCCCCCEEEECEEEEEECHHHHHHHHHHCCCCEEECCCCCCCCCEE
IDPFSVRWLVDVFGPLPVPVQSLVHKTMEIMDWTQEEAFSQVLANLKFLEERLVILLDSP
ECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
LR
CC
>Mature Secondary Structure 
AEKVVSNPVQAQFDEFPYPNVPIEQTVTDNLALFANSLTTARYLRDRKVVLPEGKVMLN
CCCHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEE
AGCGSGWETLVLATANPGARYVGVDISPESIKMAEQRFKFHKIENARFHVMDITDMTALG
CCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHEECCCEEEEEECHHHHHHC
EEFDFIACNDVLYLLDDPVAGLKGMRQVLKPDGIIRTNVHSLYQRQFIFNMQDAMELLGV
CCCCEEEECCEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCHHHHHHHHHC
MDEPAAKAVPLLREVMEALTDASFVKSHWNGDAIKTTAGILANFLLRSDKGFTVPQVFEM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LRQAGLEFISMVNWQQWKLERVLTKPVPYSMRQLNKLSEEQKLHFIELIFPNMTRLIDFW
HHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHH
CGHPGIPKAEPFTNDEWWNGTVQAHPLLVKLDAKQAFLNAIRDNGPVNINGWPGAEGNIT
CCCCCCCCCCCCCCCCCCCCEEEECEEEEEECHHHHHHHHHHCCCCEEECCCCCCCCCEE
IDPFSVRWLVDVFGPLPVPVQSLVHKTMEIMDWTQEEAFSQVLANLKFLEERLVILLDSP
ECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
LR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3041005; 1901865 [H]