Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608895
Identifier: 86608895
GI number: 86608895
Start: 1497273
End: 1497911
Strand: Direct
Name: 86608895
Synonym: CYB_1428
Alternate gene names: NA
Gene position: 1497273-1497911 (Clockwise)
Preceding gene: 86608890
Following gene: 86608897
Centisome position: 49.14
GC content: 60.25
Gene sequence:
>639_bases ATGCCCCTAACAGGTGAGGCCATGAACAGCCGCCCAGATTTCAAATCCTTTGAAAAAGAAGAAACCGAACGGTTGCGGGA TCTGCTCCCCGCTTCTTTCCGACCCTTGATCAGCGTCGTTCCCCACTTCGGGGGTGAAGCCCTGCTCATCTCCCGCCGCA AAGCCCCTTGGCAGCCCCAGGGCACCATCGCCATCGATTTTCGCCGTTGGCAAGGGATCCCTCAGCCACAGCGGGATCTG TTGTTTCTGCGGGAGGTGGGCTGGCTGGGCAACCGCAATTGGTTGCAGCCGGGGTTTTACCAATCGCTGGCCTTGATGGG GGGCATCACCACCGTGGCGGAGCTCTCTTTGCAGCACCCCTTTTCCGCTCTGTTGGCAGGTGGCATTACGGCTCTCTCCG TCCGGCAGATCTGGCAAAACCTGAACCGGGAGAGCGCCCATTTCGATGCCGATGAATTTGCCCTGCGCCGTGCTCAGTTT CGCGGCTACACCCGACAGGAGGCCGCTCAACACCTGGCAGATGCCATAGAACAGGTTCTGAAGCTGGATCCCACCGATAT CCTGACGGCGCTACGGCTGCAACGGCTGAGAACCATTGCCCGCAACCTGGCTTCTACCCCCCCCAGCGGAAACGCCTGA
Upstream 100 bases:
>100_bases AGCCTGGAGATGCGATAGACTAACCTCGCATTGGTTCTACACAGGGCTGTGGTGTCGGGGGCCGGAACAGCGCCCGTGTT CAGGCGGGCTCCCCGCCTCA
Downstream 100 bases:
>100_bases GGCCAGTTGCACTTGGGTGATGGCCACCCGACCGGAGAAGCAGATGTCGGTATCGGTTTGGGGATCCCGAGCGCGCTCCG CATAGCGGCCCTGATAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MPLTGEAMNSRPDFKSFEKEETERLRDLLPASFRPLISVVPHFGGEALLISRRKAPWQPQGTIAIDFRRWQGIPQPQRDL LFLREVGWLGNRNWLQPGFYQSLALMGGITTVAELSLQHPFSALLAGGITALSVRQIWQNLNRESAHFDADEFALRRAQF RGYTRQEAAQHLADAIEQVLKLDPTDILTALRLQRLRTIARNLASTPPSGNA
Sequences:
>Translated_212_residues MPLTGEAMNSRPDFKSFEKEETERLRDLLPASFRPLISVVPHFGGEALLISRRKAPWQPQGTIAIDFRRWQGIPQPQRDL LFLREVGWLGNRNWLQPGFYQSLALMGGITTVAELSLQHPFSALLAGGITALSVRQIWQNLNRESAHFDADEFALRRAQF RGYTRQEAAQHLADAIEQVLKLDPTDILTALRLQRLRTIARNLASTPPSGNA >Mature_211_residues PLTGEAMNSRPDFKSFEKEETERLRDLLPASFRPLISVVPHFGGEALLISRRKAPWQPQGTIAIDFRRWQGIPQPQRDLL FLREVGWLGNRNWLQPGFYQSLALMGGITTVAELSLQHPFSALLAGGITALSVRQIWQNLNRESAHFDADEFALRRAQFR GYTRQEAAQHLADAIEQVLKLDPTDILTALRLQRLRTIARNLASTPPSGNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23936; Mature: 23804
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTGEAMNSRPDFKSFEKEETERLRDLLPASFRPLISVVPHFGGEALLISRRKAPWQPQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCC GTIAIDFRRWQGIPQPQRDLLFLREVGWLGNRNWLQPGFYQSLALMGGITTVAELSLQHP CCEEEEEHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCH FSALLAGGITALSVRQIWQNLNRESAHFDADEFALRRAQFRGYTRQEAAQHLADAIEQVL HHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KLDPTDILTALRLQRLRTIARNLASTPPSGNA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PLTGEAMNSRPDFKSFEKEETERLRDLLPASFRPLISVVPHFGGEALLISRRKAPWQPQ CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCC GTIAIDFRRWQGIPQPQRDLLFLREVGWLGNRNWLQPGFYQSLALMGGITTVAELSLQHP CCEEEEEHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCH FSALLAGGITALSVRQIWQNLNRESAHFDADEFALRRAQFRGYTRQEAAQHLADAIEQVL HHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KLDPTDILTALRLQRLRTIARNLASTPPSGNA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA