Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608805
Identifier: 86608805
GI number: 86608805
Start: 1393332
End: 1393718
Strand: Direct
Name: 86608805
Synonym: CYB_1331
Alternate gene names: NA
Gene position: 1393332-1393718 (Clockwise)
Preceding gene: 86608804
Following gene: 86608806
Centisome position: 45.73
GC content: 53.49
Gene sequence:
>387_bases TTGCCCATCCAAGCTGGCAGCGCTGCCCAGCAACCCAGCAGCCATTGTCTTTGGGTTTGTGTCACTTGCGGATCTCGGTG GGTTAACGGCCAAAAAGAAGGGATTAGCAAGGGAGAAATGCTGCTGTCTGCCCTGCAATCTCAAACCCTCAATCCTCAAC TGACCCTGAAGCCGGTTGCCTGTATGAGCGGCTGCAGCCATGCTTGTGTCGTTGCGTTGGCAGCACCTCAAAAGATGACC TATGTTTTTGGAGATCTCGATCCAAAAGATGTGGATCTCATTCTGCAGACAGCAGAGCTCTACCTCACCAAGCCAGATGG GATCCTACCCTGGGCCGAGCGCCCTCTCAAAAAAGGGGTGATTGCTCGTATTCCACCACTGCACTGA
Upstream 100 bases:
>100_bases GCCAAGACATTGAGATCGTCTTTGCCTCTTCTCACACCCTTTGCTTGGACAGAAACCTATGACTATATCAAGGAGCACCA TGTCTCGATCAACTTCCCAG
Downstream 100 bases:
>100_bases GGAGCTTTCTCATGGCCACTTTTACCCCCTGGATAACCCCCCTCCATCAAGCTTGGCAGGAAGTTTCTCTGACGGGTTGG ACAACCCTTTATGAAGGGAT
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MPIQAGSAAQQPSSHCLWVCVTCGSRWVNGQKEGISKGEMLLSALQSQTLNPQLTLKPVACMSGCSHACVVALAAPQKMT YVFGDLDPKDVDLILQTAELYLTKPDGILPWAERPLKKGVIARIPPLH
Sequences:
>Translated_128_residues MPIQAGSAAQQPSSHCLWVCVTCGSRWVNGQKEGISKGEMLLSALQSQTLNPQLTLKPVACMSGCSHACVVALAAPQKMT YVFGDLDPKDVDLILQTAELYLTKPDGILPWAERPLKKGVIARIPPLH >Mature_127_residues PIQAGSAAQQPSSHCLWVCVTCGSRWVNGQKEGISKGEMLLSALQSQTLNPQLTLKPVACMSGCSHACVVALAAPQKMTY VFGDLDPKDVDLILQTAELYLTKPDGILPWAERPLKKGVIARIPPLH
Specific function: Unknown
COG id: COG5469
COG function: function code S; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13779; Mature: 13648
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQAGSAAQQPSSHCLWVCVTCGSRWVNGQKEGISKGEMLLSALQSQTLNPQLTLKPVA CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECHHH CMSGCSHACVVALAAPQKMTYVFGDLDPKDVDLILQTAELYLTKPDGILPWAERPLKKGV HHCCCCCEEEEEEECCCEEEEEECCCCCCCHHHHEEECEEEEECCCCCCCCCCCHHHCCC IARIPPLH CCCCCCCC >Mature Secondary Structure PIQAGSAAQQPSSHCLWVCVTCGSRWVNGQKEGISKGEMLLSALQSQTLNPQLTLKPVA CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECHHH CMSGCSHACVVALAAPQKMTYVFGDLDPKDVDLILQTAELYLTKPDGILPWAERPLKKGV HHCCCCCEEEEEEECCCEEEEEECCCCCCCHHHHEEECEEEEECCCCCCCCCCCHHHCCC IARIPPLH CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA