Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608763

Identifier: 86608763

GI number: 86608763

Start: 1343931

End: 1344449

Strand: Direct

Name: 86608763

Synonym: CYB_1288

Alternate gene names: NA

Gene position: 1343931-1344449 (Clockwise)

Preceding gene: 86608762

Following gene: 86608764

Centisome position: 44.11

GC content: 62.04

Gene sequence:

>519_bases
ATGCGGCTCATTGACGAGCAGGGGCGGCTTTTGGGAAAGGTCAGCCTCTTGGATCTGGGAGCTCTGGCAATTGTGGTGGT
GGCCATTGTCGCCGTCTTGTTCTTTCCGGGTCGGCAGGCGGGCAGTGTCGTCCAGGTGGGAGGTGGCCCCACGCTGCCGG
TGGAAGTGGACATGATTGTGCGCGGGGTCAGCAGCCGCTCTACGGAACCTTTTCAGGCGGGGCAGAAGGCTGACCTGATC
ATCCGCAACCAGCCCTACGGCCAGGTGGAGGTGGTGCGAGTGGAAAATGTCAGCCGCACGGTGCCGGTGGTTTTCCCCGA
TGGGCGGGTGCAGAACTTGCCCGATCCCGAAGCCTATCGCCTCGATCTGGTGTTTACCTTGCGAGGGCGCGGCCAGCGGA
CGGAGAATGGCATCGTCCTGGGCAACAATCGCGTCAAAATCGGTGTTCCCCTAGAGCTAGAGACCTTTGGCTACAACTTG
CGCGGCACCGTGATGGACGTGCGGCTGCCGCAATCGTAG

Upstream 100 bases:

>100_bases
GCTGGGCAGCAGCGCCCTAGCCTGGATCCCCTAGAGCGGGAAAGCCACTTGGAGAACAAACCTGCCTAGAATCAAGACAG
GGTGTGCGAGGAGAGGTGAT

Downstream 100 bases:

>100_bases
AGCATGACTCTAGTCAATAATAAGCTCAACTATACTGAAAATAATGTATAACATGTTCAGTACGGATTACTACCAGTTGA
TCTTTCTGTTTACTTTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRLIDEQGRLLGKVSLLDLGALAIVVVAIVAVLFFPGRQAGSVVQVGGGPTLPVEVDMIVRGVSSRSTEPFQAGQKADLI
IRNQPYGQVEVVRVENVSRTVPVVFPDGRVQNLPDPEAYRLDLVFTLRGRGQRTENGIVLGNNRVKIGVPLELETFGYNL
RGTVMDVRLPQS

Sequences:

>Translated_172_residues
MRLIDEQGRLLGKVSLLDLGALAIVVVAIVAVLFFPGRQAGSVVQVGGGPTLPVEVDMIVRGVSSRSTEPFQAGQKADLI
IRNQPYGQVEVVRVENVSRTVPVVFPDGRVQNLPDPEAYRLDLVFTLRGRGQRTENGIVLGNNRVKIGVPLELETFGYNL
RGTVMDVRLPQS
>Mature_172_residues
MRLIDEQGRLLGKVSLLDLGALAIVVVAIVAVLFFPGRQAGSVVQVGGGPTLPVEVDMIVRGVSSRSTEPFQAGQKADLI
IRNQPYGQVEVVRVENVSRTVPVVFPDGRVQNLPDPEAYRLDLVFTLRGRGQRTENGIVLGNNRVKIGVPLELETFGYNL
RGTVMDVRLPQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18700; Mature: 18700

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIDEQGRLLGKVSLLDLGALAIVVVAIVAVLFFPGRQAGSVVQVGGGPTLPVEVDMIV
CCEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEHHHEE
RGVSSRSTEPFQAGQKADLIIRNQPYGQVEVVRVENVSRTVPVVFPDGRVQNLPDPEAYR
ECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEE
LDLVFTLRGRGQRTENGIVLGNNRVKIGVPLELETFGYNLRGTVMDVRLPQS
EEEEEEECCCCCCCCCCEEECCCEEEEEECEEEHHCCCCEEEEEEEEEECCC
>Mature Secondary Structure
MRLIDEQGRLLGKVSLLDLGALAIVVVAIVAVLFFPGRQAGSVVQVGGGPTLPVEVDMIV
CCEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEHHHEE
RGVSSRSTEPFQAGQKADLIIRNQPYGQVEVVRVENVSRTVPVVFPDGRVQNLPDPEAYR
ECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEE
LDLVFTLRGRGQRTENGIVLGNNRVKIGVPLELETFGYNLRGTVMDVRLPQS
EEEEEEECCCCCCCCCCEEECCCEEEEEECEEEHHCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA