Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608749
Identifier: 86608749
GI number: 86608749
Start: 1331510
End: 1331944
Strand: Direct
Name: 86608749
Synonym: CYB_1274
Alternate gene names: NA
Gene position: 1331510-1331944 (Clockwise)
Preceding gene: 86608748
Following gene: 86608752
Centisome position: 43.7
GC content: 55.17
Gene sequence:
>435_bases ATGGAATCCCTTTCTGATCCCTTCGTCAATCCCCCCATTTACTCTGCCATCGCCTTATTCAGCTTTTTTGCTGTTATCTT TGGCATCATTTTCAAGGACAATTTGGAATACCAGGTGGCCCTTTGGCAGCTCAACCGGGATAGCCAAGCGCAAATTCGCT ACCGCACTCCTGGGGTGATCCTCACCTACAGTCTCTGCTGCCTGTTTACCTCTGGGTTTGTGGCCGCGTGTCTGAACGTG TTTGGCCTGTCTATGGCCTTGGCCGCCTGCGTCGGTGGGATCCTAGTGTTGAGCACGGCAGGCTTGGTGTGGTGGCAGTT GGGATCCCTGATGGCTCTGTTGGCTGCCGGTGGATCCCAGGCCATCGATATTGACTCTTACGGAGCAGGGGCCATTTTGG ATTCTGAGGCGGCAGCACCCCCCGAGGGAGAATAG
Upstream 100 bases:
>100_bases GCGTTATCGGTTGTGTTGTTGACATTGACCTGCTAGACATCTTCTGTGATGCTAAGAGGTGTTAAGCTAAGGACTTGGAT CCCAAACCGAGGTCAGCCCT
Downstream 100 bases:
>100_bases GATCTTGGAGTAGTCTTACCCCATGCCCTGGTCTAGCTGGATCAGCTGGATCCAGAAGAGCGTGCCTACAGAGTAGAGAA AGCTTAAGAAGTTTCTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MESLSDPFVNPPIYSAIALFSFFAVIFGIIFKDNLEYQVALWQLNRDSQAQIRYRTPGVILTYSLCCLFTSGFVAACLNV FGLSMALAACVGGILVLSTAGLVWWQLGSLMALLAAGGSQAIDIDSYGAGAILDSEAAAPPEGE
Sequences:
>Translated_144_residues MESLSDPFVNPPIYSAIALFSFFAVIFGIIFKDNLEYQVALWQLNRDSQAQIRYRTPGVILTYSLCCLFTSGFVAACLNV FGLSMALAACVGGILVLSTAGLVWWQLGSLMALLAAGGSQAIDIDSYGAGAILDSEAAAPPEGE >Mature_144_residues MESLSDPFVNPPIYSAIALFSFFAVIFGIIFKDNLEYQVALWQLNRDSQAQIRYRTPGVILTYSLCCLFTSGFVAACLNV FGLSMALAACVGGILVLSTAGLVWWQLGSLMALLAAGGSQAIDIDSYGAGAILDSEAAAPPEGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15251; Mature: 15251
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLSDPFVNPPIYSAIALFSFFAVIFGIIFKDNLEYQVALWQLNRDSQAQIRYRTPGVI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCHH LTYSLCCLFTSGFVAACLNVFGLSMALAACVGGILVLSTAGLVWWQLGSLMALLAAGGSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AIDIDSYGAGAILDSEAAAPPEGE EEECCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure MESLSDPFVNPPIYSAIALFSFFAVIFGIIFKDNLEYQVALWQLNRDSQAQIRYRTPGVI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCHH LTYSLCCLFTSGFVAACLNVFGLSMALAACVGGILVLSTAGLVWWQLGSLMALLAAGGSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AIDIDSYGAGAILDSEAAAPPEGE EEECCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA