Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608749

Identifier: 86608749

GI number: 86608749

Start: 1331510

End: 1331944

Strand: Direct

Name: 86608749

Synonym: CYB_1274

Alternate gene names: NA

Gene position: 1331510-1331944 (Clockwise)

Preceding gene: 86608748

Following gene: 86608752

Centisome position: 43.7

GC content: 55.17

Gene sequence:

>435_bases
ATGGAATCCCTTTCTGATCCCTTCGTCAATCCCCCCATTTACTCTGCCATCGCCTTATTCAGCTTTTTTGCTGTTATCTT
TGGCATCATTTTCAAGGACAATTTGGAATACCAGGTGGCCCTTTGGCAGCTCAACCGGGATAGCCAAGCGCAAATTCGCT
ACCGCACTCCTGGGGTGATCCTCACCTACAGTCTCTGCTGCCTGTTTACCTCTGGGTTTGTGGCCGCGTGTCTGAACGTG
TTTGGCCTGTCTATGGCCTTGGCCGCCTGCGTCGGTGGGATCCTAGTGTTGAGCACGGCAGGCTTGGTGTGGTGGCAGTT
GGGATCCCTGATGGCTCTGTTGGCTGCCGGTGGATCCCAGGCCATCGATATTGACTCTTACGGAGCAGGGGCCATTTTGG
ATTCTGAGGCGGCAGCACCCCCCGAGGGAGAATAG

Upstream 100 bases:

>100_bases
GCGTTATCGGTTGTGTTGTTGACATTGACCTGCTAGACATCTTCTGTGATGCTAAGAGGTGTTAAGCTAAGGACTTGGAT
CCCAAACCGAGGTCAGCCCT

Downstream 100 bases:

>100_bases
GATCTTGGAGTAGTCTTACCCCATGCCCTGGTCTAGCTGGATCAGCTGGATCCAGAAGAGCGTGCCTACAGAGTAGAGAA
AGCTTAAGAAGTTTCTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MESLSDPFVNPPIYSAIALFSFFAVIFGIIFKDNLEYQVALWQLNRDSQAQIRYRTPGVILTYSLCCLFTSGFVAACLNV
FGLSMALAACVGGILVLSTAGLVWWQLGSLMALLAAGGSQAIDIDSYGAGAILDSEAAAPPEGE

Sequences:

>Translated_144_residues
MESLSDPFVNPPIYSAIALFSFFAVIFGIIFKDNLEYQVALWQLNRDSQAQIRYRTPGVILTYSLCCLFTSGFVAACLNV
FGLSMALAACVGGILVLSTAGLVWWQLGSLMALLAAGGSQAIDIDSYGAGAILDSEAAAPPEGE
>Mature_144_residues
MESLSDPFVNPPIYSAIALFSFFAVIFGIIFKDNLEYQVALWQLNRDSQAQIRYRTPGVILTYSLCCLFTSGFVAACLNV
FGLSMALAACVGGILVLSTAGLVWWQLGSLMALLAAGGSQAIDIDSYGAGAILDSEAAAPPEGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15251; Mature: 15251

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLSDPFVNPPIYSAIALFSFFAVIFGIIFKDNLEYQVALWQLNRDSQAQIRYRTPGVI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCHH
LTYSLCCLFTSGFVAACLNVFGLSMALAACVGGILVLSTAGLVWWQLGSLMALLAAGGSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AIDIDSYGAGAILDSEAAAPPEGE
EEECCCCCCCCEECCCCCCCCCCC
>Mature Secondary Structure
MESLSDPFVNPPIYSAIALFSFFAVIFGIIFKDNLEYQVALWQLNRDSQAQIRYRTPGVI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCHH
LTYSLCCLFTSGFVAACLNVFGLSMALAACVGGILVLSTAGLVWWQLGSLMALLAAGGSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AIDIDSYGAGAILDSEAAAPPEGE
EEECCCCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA