| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is bcp [H]
Identifier: 86608536
GI number: 86608536
Start: 1095967
End: 1096404
Strand: Direct
Name: bcp [H]
Synonym: CYB_1057
Alternate gene names: 86608536
Gene position: 1095967-1096404 (Clockwise)
Preceding gene: 86608535
Following gene: 86608537
Centisome position: 35.97
GC content: 54.79
Gene sequence:
>438_bases ATGGTTCTCGCTGTTGGCACCCCTGCTCCTGGGTTCAACACCACTGACACCCAAGGCAACCAGGTTTCGCTGGCTGATTT TGCCGGCAAAACCGTTGTCCTCTATTTTTACCCCAAAGACGACACCCCCGGCTGTACCAAAGAAGCCTGTGGATTCCGCG ACGCCTACGCCGACTACCAAAGCAAGGACGTGGTGGTGCTGGGGGTGAGCATGGACGACCAAGCTTCTCACCAAAAGTTC ACCGAAAAGTACAACTTGCCTTTCCCCCTACTGGTGGATAGCAGTGGGGTGATTACCCGCGCCTACGATGTGGATGGGGG CGGCTATGCCAAGCGGGTGACCTACGTCATTGATGGCGAGGGCAAAATTGCCAAAGTCTACCAGAACATCAATACCGAAA CCCATGCCCGCGATATTTTGGCGGATTTGGGTTTGTAG
Upstream 100 bases:
>100_bases CAATGCCAAGCTGGAGCGGTAATGCCTTGACAGAGACAAGCAGGGCTGAAGAAAATGCTGAGGGCAGCCCTATTCATCAC ACTTTTTGGGTCACGCACCT
Downstream 100 bases:
>100_bases AAACGCTGCCTCTTTTCAGTACTCCTCGCTAGATCCCGGCCTTTGCGCATGAACGACGACATTCCGGTCGCCCGTCGCCA GTCCACTCCGGCGAAAAAAG
Product: anti-oxidant AhpCTSA family protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MVLAVGTPAPGFNTTDTQGNQVSLADFAGKTVVLYFYPKDDTPGCTKEACGFRDAYADYQSKDVVVLGVSMDDQASHQKF TEKYNLPFPLLVDSSGVITRAYDVDGGGYAKRVTYVIDGEGKIAKVYQNINTETHARDILADLGL
Sequences:
>Translated_145_residues MVLAVGTPAPGFNTTDTQGNQVSLADFAGKTVVLYFYPKDDTPGCTKEACGFRDAYADYQSKDVVVLGVSMDDQASHQKF TEKYNLPFPLLVDSSGVITRAYDVDGGGYAKRVTYVIDGEGKIAKVYQNINTETHARDILADLGL >Mature_145_residues MVLAVGTPAPGFNTTDTQGNQVSLADFAGKTVVLYFYPKDDTPGCTKEACGFRDAYADYQSKDVVVLGVSMDDQASHQKF TEKYNLPFPLLVDSSGVITRAYDVDGGGYAKRVTYVIDGEGKIAKVYQNINTETHARDILADLGL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI32189392, Length=137, Percent_Identity=34.3065693430657, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1788825, Length=146, Percent_Identity=37.6712328767123, Blast_Score=100, Evalue=4e-23, Organism=Caenorhabditis elegans, GI193204376, Length=137, Percent_Identity=32.8467153284672, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32565831, Length=137, Percent_Identity=32.8467153284672, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6322180, Length=93, Percent_Identity=39.7849462365591, Blast_Score=77, Evalue=1e-15, Organism=Drosophila melanogaster, GI17738015, Length=129, Percent_Identity=35.6589147286822, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24656348, Length=137, Percent_Identity=30.6569343065693, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI17864676, Length=137, Percent_Identity=30.6569343065693, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 15699; Mature: 15699
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLAVGTPAPGFNTTDTQGNQVSLADFAGKTVVLYFYPKDDTPGCTKEACGFRDAYADYQ CEEEECCCCCCCCCCCCCCCEEEEHCCCCCEEEEEEEECCCCCCCCHHHCCCCHHHCCCC SKDVVVLGVSMDDQASHQKFTEKYNLPFPLLVDSSGVITRAYDVDGGGYAKRVTYVIDGE CCCEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEECCC GKIAKVYQNINTETHARDILADLGL CCEEEEECCCCCCHHHHHHHHHCCC >Mature Secondary Structure MVLAVGTPAPGFNTTDTQGNQVSLADFAGKTVVLYFYPKDDTPGCTKEACGFRDAYADYQ CEEEECCCCCCCCCCCCCCCEEEEHCCCCCEEEEEEEECCCCCCCCHHHCCCCHHHCCCC SKDVVVLGVSMDDQASHQKFTEKYNLPFPLLVDSSGVITRAYDVDGGGYAKRVTYVIDGE CCCEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEECCC GKIAKVYQNINTETHARDILADLGL CCEEEEECCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]