| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608523
Identifier: 86608523
GI number: 86608523
Start: 1085269
End: 1085532
Strand: Reverse
Name: 86608523
Synonym: CYB_1043
Alternate gene names: NA
Gene position: 1085532-1085269 (Counterclockwise)
Preceding gene: 86608525
Following gene: 86608517
Centisome position: 35.63
GC content: 59.09
Gene sequence:
>264_bases ATGGCGCAGATTCGCGAGATTCCCCTTGCCCAAATTCGCCGCCCTTTGCCGCGGCAAACGGATCCGGATAAGGTGCAGGC GCTGATGGCTTCCATTGAAGCAGTCGGCCTACAGGAGCCCATTGAGGTTTTGGAAGTGGAAGGGGAGTATTATGGGTTCT CCGGCTGCCATCGCTACGAGGCATTTGTCCGCTTGGGCAAGGAGCGGATCCCCTGCCGGGTGCGAAAAGCGCCACGTGCT GTTTTGAGGCTACACCTGGCCTGA
Upstream 100 bases:
>100_bases TGCCATGCTCTGGCCTGAGAATCCATACCCTCTGCCAGTCTTGATAGAGCAAAGTCATAACGAGTATGATTAAGTAGCTT GCTTAGGGAGAAAGTTCAAC
Downstream 100 bases:
>100_bases AAGGGATCCCTTCTGGCCCGGCTCCTCTTCGGCGGTGTAGCCCCGTTCGTAGGCAAAACGCACCAGTTGCGAGCGATTTT CCAAAGAAAGCTTGCTGAGG
Product: nuclease
Products: NA
Alternate protein names: ParB Domain Protein Nuclease; ParB-Like Nuclease; ParB Nuclease Domain Protein; Transcriptional Regulator; ParB Domain-Containing Protein Nuclease; ParB-Like Nuclease Domain Family; Sulfiredoxin
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MAQIREIPLAQIRRPLPRQTDPDKVQALMASIEAVGLQEPIEVLEVEGEYYGFSGCHRYEAFVRLGKERIPCRVRKAPRA VLRLHLA
Sequences:
>Translated_87_residues MAQIREIPLAQIRRPLPRQTDPDKVQALMASIEAVGLQEPIEVLEVEGEYYGFSGCHRYEAFVRLGKERIPCRVRKAPRA VLRLHLA >Mature_86_residues AQIREIPLAQIRRPLPRQTDPDKVQALMASIEAVGLQEPIEVLEVEGEYYGFSGCHRYEAFVRLGKERIPCRVRKAPRAV LRLHLA
Specific function: Unknown
COG id: COG5119
COG function: function code R; Uncharacterized protein, contains ParB-like nuclease domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI22129778, Length=93, Percent_Identity=37.6344086021505, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9952; Mature: 9821
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQIREIPLAQIRRPLPRQTDPDKVQALMASIEAVGLQEPIEVLEVEGEYYGFSGCHRYE CCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCCHHHHHH AFVRLGKERIPCRVRKAPRAVLRLHLA HHHHHCHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure AQIREIPLAQIRRPLPRQTDPDKVQALMASIEAVGLQEPIEVLEVEGEYYGFSGCHRYE CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCCHHHHHH AFVRLGKERIPCRVRKAPRAVLRLHLA HHHHHCHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA