| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608517
Identifier: 86608517
GI number: 86608517
Start: 1079568
End: 1080521
Strand: Reverse
Name: 86608517
Synonym: CYB_1038
Alternate gene names: NA
Gene position: 1080521-1079568 (Counterclockwise)
Preceding gene: 86608523
Following gene: 86608516
Centisome position: 35.47
GC content: 61.01
Gene sequence:
>954_bases ATGTCATTTGAGAATCGTTCCACCGCCCCTGAACTCTTAATCCATGTCTTGCGGGAGGGGTTGACCGAATCTATCCATCA TTGCCAAGCTGTCGTGGCCGATAGCCGCGGGCGTTCTCTGGCCATGGCCGGCAACAGCACCACCCCTGTTTTTGCCCGTT CTGCCCTCAAACCTTTCCAAGCACTGGCCATGCTCTCCACCGGCATCCGCGAGCGCTACCGCCTCAGCGAGAAAGATATT GCCATCATGTGCGGATCCCATCAGGGCACCACGGCTCATGCGCGGCAGGTGTTCAGCATACTGTGGCGGGCCGATCTGTC TCCCGATTTGCTGGTCTGCCCCACCCCACCCGGCAAGCCCAGCCCCCTGTGCCACAACTGCTCCGGCAAACATGCTGGCA TGCTCGTGGCCAGCCGCGCCCAAAACTGGACCTTGTCGGACTATGCCCAGCGGCAGCATCCGGTGCAAGCGCTGGTGCGG GCCAAGTTGGCGGATTTGCTGCAAATGCCCTCGGAGGAGTTTTTGTTTGCGCGGGATGACTGTGGGGTGCCCACCTACCA ATTGCAACTGAACCACCTGGCTTCTCTATTCGCCCAACTGACCGCCGGCGAGCGGCCCGACTTGGAATCGGTAGCACGGG CCATGACCCATCACCCGGAGATGGTGGCTGGACAGGGGTGTTTCGACACGGAATTGATGCGGGCCACTCAAGGGGATCTG GTGAGCAAATCGGGTGCTGAAGGGATCCAGTGCATTGGCCGGGTGGGGGAAGGCATGGGCCTGGCCATCAAGGTCCAGGA TGGAGCCGCCCGGGCCAAGTATGCCCTGGCTTTGCACCTGCTGCAGCGTATGGGCTGGATTCAGCCTGCTGCTGCTGAAA TGCTAGGGGAGCGCTTCCTCTCCATTGGCCCTTACACCCGCCTTGAGGTGGAAGGGGAACTGCGTATGCCTTGA
Upstream 100 bases:
>100_bases CTTTAGGGGATCCCGCCAACTTCTCGCGTAGGATCTGCGCGTATGATTTGAAGAGTACACATCCTCTTTCCCAGCTTCGT CAGCCCTTTCCCAGGTTTTC
Downstream 100 bases:
>100_bases AGAGCCGGAGGTGGGAAGGCCTTGCACCCAAACTCTTGGTGATGCTAGATTTCTCGAAGAAAAGGCCCAAAAACTAATGA TTGAAGCCCTCTTCAAGACT
Product: L-asparaginase, thermolabile
Products: NA
Alternate protein names: L-Asparaginase; Asparaginase; L-Asparaginase Rmolabile; L-Asparaginase II Protein; L-Asparaginase Rmolabile Subfamily; L-Asparaginase Rmolabile Family; Fumarate Lyase; Asparaginase-Related Protein
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSFENRSTAPELLIHVLREGLTESIHHCQAVVADSRGRSLAMAGNSTTPVFARSALKPFQALAMLSTGIRERYRLSEKDI AIMCGSHQGTTAHARQVFSILWRADLSPDLLVCPTPPGKPSPLCHNCSGKHAGMLVASRAQNWTLSDYAQRQHPVQALVR AKLADLLQMPSEEFLFARDDCGVPTYQLQLNHLASLFAQLTAGERPDLESVARAMTHHPEMVAGQGCFDTELMRATQGDL VSKSGAEGIQCIGRVGEGMGLAIKVQDGAARAKYALALHLLQRMGWIQPAAAEMLGERFLSIGPYTRLEVEGELRMP
Sequences:
>Translated_317_residues MSFENRSTAPELLIHVLREGLTESIHHCQAVVADSRGRSLAMAGNSTTPVFARSALKPFQALAMLSTGIRERYRLSEKDI AIMCGSHQGTTAHARQVFSILWRADLSPDLLVCPTPPGKPSPLCHNCSGKHAGMLVASRAQNWTLSDYAQRQHPVQALVR AKLADLLQMPSEEFLFARDDCGVPTYQLQLNHLASLFAQLTAGERPDLESVARAMTHHPEMVAGQGCFDTELMRATQGDL VSKSGAEGIQCIGRVGEGMGLAIKVQDGAARAKYALALHLLQRMGWIQPAAAEMLGERFLSIGPYTRLEVEGELRMP >Mature_316_residues SFENRSTAPELLIHVLREGLTESIHHCQAVVADSRGRSLAMAGNSTTPVFARSALKPFQALAMLSTGIRERYRLSEKDIA IMCGSHQGTTAHARQVFSILWRADLSPDLLVCPTPPGKPSPLCHNCSGKHAGMLVASRAQNWTLSDYAQRQHPVQALVRA KLADLLQMPSEEFLFARDDCGVPTYQLQLNHLASLFAQLTAGERPDLESVARAMTHHPEMVAGQGCFDTELMRATQGDLV SKSGAEGIQCIGRVGEGMGLAIKVQDGAARAKYALALHLLQRMGWIQPAAAEMLGERFLSIGPYTRLEVEGELRMP
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34564; Mature: 34433
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFENRSTAPELLIHVLREGLTESIHHCQAVVADSRGRSLAMAGNSTTPVFARSALKPFQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH ALAMLSTGIRERYRLSEKDIAIMCGSHQGTTAHARQVFSILWRADLSPDLLVCPTPPGKP HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCC SPLCHNCSGKHAGMLVASRAQNWTLSDYAQRQHPVQALVRAKLADLLQMPSEEFLFARDD CCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCC CGVPTYQLQLNHLASLFAQLTAGERPDLESVARAMTHHPEMVAGQGCFDTELMRATQGDL CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCHHHHHHHHCCCH VSKSGAEGIQCIGRVGEGMGLAIKVQDGAARAKYALALHLLQRMGWIQPAAAEMLGERFL HCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SIGPYTRLEVEGELRMP HCCCCEEEEECCCCCCC >Mature Secondary Structure SFENRSTAPELLIHVLREGLTESIHHCQAVVADSRGRSLAMAGNSTTPVFARSALKPFQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH ALAMLSTGIRERYRLSEKDIAIMCGSHQGTTAHARQVFSILWRADLSPDLLVCPTPPGKP HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCC SPLCHNCSGKHAGMLVASRAQNWTLSDYAQRQHPVQALVRAKLADLLQMPSEEFLFARDD CCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCC CGVPTYQLQLNHLASLFAQLTAGERPDLESVARAMTHHPEMVAGQGCFDTELMRATQGDL CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCHHHHHHHHCCCH VSKSGAEGIQCIGRVGEGMGLAIKVQDGAARAKYALALHLLQRMGWIQPAAAEMLGERFL HCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SIGPYTRLEVEGELRMP HCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA