| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is murQ
Identifier: 86608497
GI number: 86608497
Start: 1057548
End: 1058462
Strand: Reverse
Name: murQ
Synonym: CYB_1018
Alternate gene names: 86608497
Gene position: 1058462-1057548 (Counterclockwise)
Preceding gene: 86608498
Following gene: 86608496
Centisome position: 34.74
GC content: 61.75
Gene sequence:
>915_bases TTGGCTTGGGATCCCAGATCCCTGACCGAAAGCCCCAACCCGGCTACAGCCGAGATCGACCGTCTCAGCACCTGGGAACT GGTGAAACGGATCAACGCCGAGGATCGGCAGGTGCCGGAAGCGGTGGCTGCTCAGGCGGAGCCGATTGCCCAAGCCATCG ATGCCATTGCCCAGCGGATGCGTCACGGCGGGCGGCTGATCTATATCGGGGCAGGAACCTCAGGTCGGCTGGGGGTACTG GATGCGGCTGAGTGCCCACCCACTTTTGGCACTTCCCCCGCACAGGTGGTGGCTTTGATCGCCGGGGGGGAAAAAGCCCT GACCCAGGCGGTAGAGGGTGCAGAGGACGACGCAGAAGCGGCTGCCCGCGCGCTGGAGGGTCTTCACCTCCAAGCTCAAG ATAGTGTTGTGGGAATTGCCGCCAGCGGTCGTACCCCCTATGTGCTGGGTGGGATCCAAGCCGCCAGAAGTATTGGGGCG CTCACGATTGGCCTGGCCTGCAATCACCCTTCTCCTCTAACCGAGCAGGTGGATATTGCTATTGCCCCTTTGGTGGGGCC GGAGGTAATCCTCGGATCCACCCGCATGAAAGCCGGCACAGCCCAAAAGTTGGTGTTGAACACGATCTCCACCGGGGTGA TGATCCGCTTGGGCAAGACTTATGGCAACCTAATGGTGGATCTCCAGGCCAGCAATGCCAAGCTCAAGCAGCGGGCGGAG CGAATGGTGGCCCTAGCCTGCGATCTGGATCCCGCCGCGGCTGCCCAATTGCTGCAGGCTTGTGATGGAGAGGTGAAAAC CGCGATCCTTGTGGCCTTGATGGGGTGCTCTGCTCAGGAAGCTCGTCAGCACTTGCAACAGGCCCAGGGCAACATTCGCC AGGTGCTTGATTCCGTTCTGGCGCAGCGGCGGTGA
Upstream 100 bases:
>100_bases AGAGCCCCCTGCCACCGATAGAATCCGAGAAGACAAAGTGTAGGATCCCTGAAGGCGGATCCCTCTTGCCTGGACAAGCG CTGCCATGGTTTCTCCACAA
Downstream 100 bases:
>100_bases CAATAGTTGAATGGCTTGTCCATGAGCGTTTGCGGCTACCTCTACACGCCTTCCCATGCCCCTTTGCCGGAACAGGAGTT GGCCTGGCTCAAGTTGCGAG
Product: N-acetylmuramic acid-6-phosphate etherase
Products: NA
Alternate protein names: MurNAc-6-P etherase; N-acetylmuramic acid 6-phosphate hydrolase; N-acetylmuramic acid 6-phosphate lyase
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MAWDPRSLTESPNPATAEIDRLSTWELVKRINAEDRQVPEAVAAQAEPIAQAIDAIAQRMRHGGRLIYIGAGTSGRLGVL DAAECPPTFGTSPAQVVALIAGGEKALTQAVEGAEDDAEAAARALEGLHLQAQDSVVGIAASGRTPYVLGGIQAARSIGA LTIGLACNHPSPLTEQVDIAIAPLVGPEVILGSTRMKAGTAQKLVLNTISTGVMIRLGKTYGNLMVDLQASNAKLKQRAE RMVALACDLDPAAAAQLLQACDGEVKTAILVALMGCSAQEARQHLQQAQGNIRQVLDSVLAQRR
Sequences:
>Translated_304_residues MAWDPRSLTESPNPATAEIDRLSTWELVKRINAEDRQVPEAVAAQAEPIAQAIDAIAQRMRHGGRLIYIGAGTSGRLGVL DAAECPPTFGTSPAQVVALIAGGEKALTQAVEGAEDDAEAAARALEGLHLQAQDSVVGIAASGRTPYVLGGIQAARSIGA LTIGLACNHPSPLTEQVDIAIAPLVGPEVILGSTRMKAGTAQKLVLNTISTGVMIRLGKTYGNLMVDLQASNAKLKQRAE RMVALACDLDPAAAAQLLQACDGEVKTAILVALMGCSAQEARQHLQQAQGNIRQVLDSVLAQRR >Mature_303_residues AWDPRSLTESPNPATAEIDRLSTWELVKRINAEDRQVPEAVAAQAEPIAQAIDAIAQRMRHGGRLIYIGAGTSGRLGVLD AAECPPTFGTSPAQVVALIAGGEKALTQAVEGAEDDAEAAARALEGLHLQAQDSVVGIAASGRTPYVLGGIQAARSIGAL TIGLACNHPSPLTEQVDIAIAPLVGPEVILGSTRMKAGTAQKLVLNTISTGVMIRLGKTYGNLMVDLQASNAKLKQRAER MVALACDLDPAAAAQLLQACDGEVKTAILVALMGCSAQEARQHLQQAQGNIRQVLDSVLAQRR
Specific function: Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
COG id: COG2103
COG function: function code R; Predicted sugar phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain
Homologues:
Organism=Escherichia coli, GI1788768, Length=294, Percent_Identity=54.7619047619048, Blast_Score=303, Evalue=7e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURQ_SYNJB (Q2JMP1)
Other databases:
- EMBL: CP000240 - RefSeq: YP_477259.1 - ProteinModelPortal: Q2JMP1 - SMR: Q2JMP1 - STRING: Q2JMP1 - GeneID: 3902161 - GenomeReviews: CP000240_GR - KEGG: cyb:CYB_1018 - TIGR: CYB_1018 - eggNOG: COG2103 - HOGENOM: HBG703490 - OMA: LVPTYGI - PhylomeDB: Q2JMP1 - ProtClustDB: PRK05441 - BioCyc: SSP321332:CYB_1018-MONOMER - HAMAP: MF_00068 - InterPro: IPR005488 - InterPro: IPR001347 - TIGRFAMs: TIGR00274
Pfam domain/function: PF01380 SIS
EC number: NA
Molecular weight: Translated: 31727; Mature: 31596
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS01272 GCKR; PS51464 SIS
Important sites: ACT_SITE 84-84 ACT_SITE 115-115
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWDPRSLTESPNPATAEIDRLSTWELVKRINAEDRQVPEAVAAQAEPIAQAIDAIAQRM CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RHGGRLIYIGAGTSGRLGVLDAAECPPTFGTSPAQVVALIAGGEKALTQAVEGAEDDAEA HHCCEEEEEECCCCCCEEECCCCCCCCCCCCCHHHEEEEEECCHHHHHHHHCCCCCHHHH AARALEGLHLQAQDSVVGIAASGRTPYVLGGIQAARSIGALTIGLACNHPSPLTEQVDIA HHHHHHCCCEEECCCEEEEEECCCCCEEEHHHHHHHHHCCEEEEEEECCCCCCCCCCCEE IAPLVGPEVILGSTRMKAGTAQKLVLNTISTGVMIRLGKTYGNLMVDLQASNAKLKQRAE EECCCCCHHEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCHHHHHHHH RMVALACDLDPAAAAQLLQACDGEVKTAILVALMGCSAQEARQHLQQAQGNIRQVLDSVL HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AQRR HCCC >Mature Secondary Structure AWDPRSLTESPNPATAEIDRLSTWELVKRINAEDRQVPEAVAAQAEPIAQAIDAIAQRM CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RHGGRLIYIGAGTSGRLGVLDAAECPPTFGTSPAQVVALIAGGEKALTQAVEGAEDDAEA HHCCEEEEEECCCCCCEEECCCCCCCCCCCCCHHHEEEEEECCHHHHHHHHCCCCCHHHH AARALEGLHLQAQDSVVGIAASGRTPYVLGGIQAARSIGALTIGLACNHPSPLTEQVDIA HHHHHHCCCEEECCCEEEEEECCCCCEEEHHHHHHHHHCCEEEEEEECCCCCCCCCCCEE IAPLVGPEVILGSTRMKAGTAQKLVLNTISTGVMIRLGKTYGNLMVDLQASNAKLKQRAE EECCCCCHHEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCHHHHHHHH RMVALACDLDPAAAAQLLQACDGEVKTAILVALMGCSAQEARQHLQQAQGNIRQVLDSVL HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AQRR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA