| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608461
Identifier: 86608461
GI number: 86608461
Start: 1017330
End: 1017698
Strand: Reverse
Name: 86608461
Synonym: CYB_0982
Alternate gene names: NA
Gene position: 1017698-1017330 (Counterclockwise)
Preceding gene: 86608463
Following gene: 86608460
Centisome position: 33.4
GC content: 53.39
Gene sequence:
>369_bases ATGGCTACAACCAGTAAACCAAAACCACTCACTGGCCAAGAGCTCCTCGACAAGGTAACTTCAATGGGAAATGCGGATCG CAAGGAAAAAGCTCGCGCCTGTGGTTATGTCACCTACACCAAGAATGGTCAGGAGCGAGTGAATCTGATGCAGTTTAACA ACGCCCTGTTGAAGGCCGTTGGCGTGGATCTCGGCGCTAGTGACGAAAATGGATCCCGTGGCCGCGCTCCTACCTTCCGG GTTTCGGTTCATAAGAATGGCAACCTCCTGATTGGAGCTGCCTACACCAAGAAGATGGGCCTCAAGCCCGGAGATGAGTT CGAGATCAAGCTGGGCCACCACAACATCAAGCTGGAGCGGGTCAACTGA
Upstream 100 bases:
>100_bases CGCACTCATTCCCTCTAATTAAGAAGAGTTGGATCAAACTCTATTGCAATCGCTGTTTGTTTCTGGCTACACTAACAGTT GTCCCTAAAACCATCTCGAT
Downstream 100 bases:
>100_bases TTTGCTGTCTCCCTGGATGCTTTTCCCTGCTGGTGAGTTCATCTCAGCTTGGGTAAAGCCTTTGGTATTCCTTTCGGCCT CTAGGGGCTTGGGAGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MATTSKPKPLTGQELLDKVTSMGNADRKEKARACGYVTYTKNGQERVNLMQFNNALLKAVGVDLGASDENGSRGRAPTFR VSVHKNGNLLIGAAYTKKMGLKPGDEFEIKLGHHNIKLERVN
Sequences:
>Translated_122_residues MATTSKPKPLTGQELLDKVTSMGNADRKEKARACGYVTYTKNGQERVNLMQFNNALLKAVGVDLGASDENGSRGRAPTFR VSVHKNGNLLIGAAYTKKMGLKPGDEFEIKLGHHNIKLERVN >Mature_121_residues ATTSKPKPLTGQELLDKVTSMGNADRKEKARACGYVTYTKNGQERVNLMQFNNALLKAVGVDLGASDENGSRGRAPTFRV SVHKNGNLLIGAAYTKKMGLKPGDEFEIKLGHHNIKLERVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13328; Mature: 13197
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTSKPKPLTGQELLDKVTSMGNADRKEKARACGYVTYTKNGQERVNLMQFNNALLKAV CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHH GVDLGASDENGSRGRAPTFRVSVHKNGNLLIGAAYTKKMGLKPGDEFEIKLGHHNIKLER CCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECHHHCCCCCCCCCEEEEECCCEEEEEE VN CC >Mature Secondary Structure ATTSKPKPLTGQELLDKVTSMGNADRKEKARACGYVTYTKNGQERVNLMQFNNALLKAV CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHH GVDLGASDENGSRGRAPTFRVSVHKNGNLLIGAAYTKKMGLKPGDEFEIKLGHHNIKLER CCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECHHHCCCCCCCCCEEEEECCCEEEEEE VN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA