Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608443

Identifier: 86608443

GI number: 86608443

Start: 1000925

End: 1001389

Strand: Direct

Name: 86608443

Synonym: CYB_0964

Alternate gene names: NA

Gene position: 1000925-1001389 (Clockwise)

Preceding gene: 86608442

Following gene: 86608447

Centisome position: 32.85

GC content: 60.0

Gene sequence:

>465_bases
ATGGTTGGGGCTGTTGCTTCTCACCCAGCTTGGCTCCTGTCTCTCCCAGCCCAAGGACAGGTTGTTGGGGCTGTCGAGGA
GGGATCCCCGGGCCCCTTTTTTGCAACGGATGGCCTGGCCCTGCGGGGCTATGACCCGGTGGCCTATTTCATCGACGGCA
AGCCGGTCAAGGGATCCCCAGCGTATGAATGGGAGTGGGGAGGGGTAACCTGGAGGTTTGCCAGCGCCGACAATCGAGAG
CGGTTTCGCAACAACCCAGAGCGCTTTGCCCCCCAGTACGGCGGGTTTTGTGCCTGGGCCGTGGCCCACAACTACCTTTA
CCCGGTGGATCCCTTTGCCTGGAAAATTGTTGATGACAAGCTATACCTGAACGCCAACCAGCGGGTACAGCGTAACTGGG
AGCGCGACATCCCCGGCTTGATCAAGAGGGCAGATGCCAACTGGCCAGCTTTGAGAAGCCGATAG

Upstream 100 bases:

>100_bases
AGGGGAAGAGTAAGGCTTTCTTGCTCATTTCGATTTTCGATTGAGGACTTGGGAGGTTGTGATGGTCAAAAATCGTTGGG
CTTTGATCCCGCTGCTGCTG

Downstream 100 bases:

>100_bases
GCCCAAGTCCCTCTGGCCTGGGGTTCAATGGGCGAGGCGCAGGGTCACCTTGATGCCAACTCGGTAGGGGCCGCTTTCGC
AGAGTTCCAGCTGGCCTCCC

Product: YHS domain-containing protein

Products: NA

Alternate protein names: YHS Domain-Containing Protein; YHS Domain Family; Tat Pathway Signal Sequence Domain Protein

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MVGAVASHPAWLLSLPAQGQVVGAVEEGSPGPFFATDGLALRGYDPVAYFIDGKPVKGSPAYEWEWGGVTWRFASADNRE
RFRNNPERFAPQYGGFCAWAVAHNYLYPVDPFAWKIVDDKLYLNANQRVQRNWERDIPGLIKRADANWPALRSR

Sequences:

>Translated_154_residues
MVGAVASHPAWLLSLPAQGQVVGAVEEGSPGPFFATDGLALRGYDPVAYFIDGKPVKGSPAYEWEWGGVTWRFASADNRE
RFRNNPERFAPQYGGFCAWAVAHNYLYPVDPFAWKIVDDKLYLNANQRVQRNWERDIPGLIKRADANWPALRSR
>Mature_154_residues
MVGAVASHPAWLLSLPAQGQVVGAVEEGSPGPFFATDGLALRGYDPVAYFIDGKPVKGSPAYEWEWGGVTWRFASADNRE
RFRNNPERFAPQYGGFCAWAVAHNYLYPVDPFAWKIVDDKLYLNANQRVQRNWERDIPGLIKRADANWPALRSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17326; Mature: 17326

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGAVASHPAWLLSLPAQGQVVGAVEEGSPGPFFATDGLALRGYDPVAYFIDGKPVKGSP
CCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEECCEEEECCCCEEEEECCCCCCCCC
AYEWEWGGVTWRFASADNRERFRNNPERFAPQYGGFCAWAVAHNYLYPVDPFAWKIVDDK
CCEEECCCEEEEEECCCCHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCE
LYLNANQRVQRNWERDIPGLIKRADANWPALRSR
EEECCCHHHHHHHCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVGAVASHPAWLLSLPAQGQVVGAVEEGSPGPFFATDGLALRGYDPVAYFIDGKPVKGSP
CCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEECCEEEECCCCEEEEECCCCCCCCC
AYEWEWGGVTWRFASADNRERFRNNPERFAPQYGGFCAWAVAHNYLYPVDPFAWKIVDDK
CCEEECCCEEEEEECCCCHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCE
LYLNANQRVQRNWERDIPGLIKRADANWPALRSR
EEECCCHHHHHHHCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA