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The map label for this gene is 86608428

Identifier: 86608428

GI number: 86608428

Start: 983880

End: 984797

Strand: Reverse

Name: 86608428

Synonym: CYB_0948

Alternate gene names: NA

Gene position: 984797-983880 (Counterclockwise)

Preceding gene: 86608431

Following gene: 86608418

Centisome position: 32.32

GC content: 62.31

Gene sequence:

>918_bases
ATGTCTTTGCCAATTGTTTACCACCCCGACTACAGTGCCCCCCTGCCGCCGGGCCATCGCTTTCCCATGCCGAAATTTCG
CCTCTTGCAAGAGCTGCTGCTGCGGGAAGGGGTGATCCGCCCCCAGCAAGTGCACCACCCTGAGCTGCCCCCTCTCGCCT
GGATTGAGTCGGTACATACCCCTGAGTACGTCAGAGCCTACTGTGAGGGATCCCTGGAGGCCAAGCTGCAGCGGCGCATC
GGCCTGCCCTGGAGCCCGGAGCTGGTGCAGCGCACCTGTCGAGCGGTGGGGGGTACCGTCTTGACCGCCCAATTGGCCCT
GCGCCACGGCCTGGCCTGCAACACCGCCGGCGGCACCCACCATGCCTTCCCCGCCTACGGCTCCGGCTTTTGTATCTTCA
ACGACCTGGCCATTGCCGCCCAAGTCCTGCTGCAGCAAGGGCTGGTGCAAAGGCTCTTGATCGTGGATCTGGATGTCCAT
CAAGGAGATGGCACTGCTTGGATCTTTCGCTCCGAGCCGCGGGTGTTCACCTTTTCCATGCACTGCGAGGCCAACTTCCC
CGCCACCAAACAACAGAGCGACCTGGACGTGCCCCTGCCAGTAGGCATGGAAGATGAAGCCTATCTCCAGACTTTGGCCG
ACCACTTGCCCGATCTGTTGGCTCAGGTGCGCCCTGACCTGGTGCTCTACGATGCCGGTGTGGATCCCCACGAGGAAGAT
CTCCTGGGCAAGCTGGCCCTTAGCGACCAGGGCCTGTTTCGGCGAGACATGCAGGTGCTGAACACTTGTCTAAAGCAGGG
CTATCCTGTCGCCTGCGTCATCGGCGGCGGCTACGGCAAAGACCTCAACCGCCTCGTGTATCGCCACTCCCTGCTGCACC
GAGCGGCCAGCGAAGTGTACCGCCAATACCGTCTTTAG

Upstream 100 bases:

>100_bases
GCAAGAGTCTCGAAGGGATCCGGCAGGAGCGGGCTACCTCTACCATAAGCACTGGAGCCGTCATAGGCCATGCTCGCCGC
CGTCAATCCAGTTGCCCTTG

Downstream 100 bases:

>100_bases
CCGGGCGCAAACTAGGCGTATTCGGCAATCACTACTGTGATGTTGTCTCGCCCGCCCCGCTCTTTGGCCGCCTCGATGAG
CTTTAGGGGAAGTTGCTCCA

Product: histone deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSLPIVYHPDYSAPLPPGHRFPMPKFRLLQELLLREGVIRPQQVHHPELPPLAWIESVHTPEYVRAYCEGSLEAKLQRRI
GLPWSPELVQRTCRAVGGTVLTAQLALRHGLACNTAGGTHHAFPAYGSGFCIFNDLAIAAQVLLQQGLVQRLLIVDLDVH
QGDGTAWIFRSEPRVFTFSMHCEANFPATKQQSDLDVPLPVGMEDEAYLQTLADHLPDLLAQVRPDLVLYDAGVDPHEED
LLGKLALSDQGLFRRDMQVLNTCLKQGYPVACVIGGGYGKDLNRLVYRHSLLHRAASEVYRQYRL

Sequences:

>Translated_305_residues
MSLPIVYHPDYSAPLPPGHRFPMPKFRLLQELLLREGVIRPQQVHHPELPPLAWIESVHTPEYVRAYCEGSLEAKLQRRI
GLPWSPELVQRTCRAVGGTVLTAQLALRHGLACNTAGGTHHAFPAYGSGFCIFNDLAIAAQVLLQQGLVQRLLIVDLDVH
QGDGTAWIFRSEPRVFTFSMHCEANFPATKQQSDLDVPLPVGMEDEAYLQTLADHLPDLLAQVRPDLVLYDAGVDPHEED
LLGKLALSDQGLFRRDMQVLNTCLKQGYPVACVIGGGYGKDLNRLVYRHSLLHRAASEVYRQYRL
>Mature_304_residues
SLPIVYHPDYSAPLPPGHRFPMPKFRLLQELLLREGVIRPQQVHHPELPPLAWIESVHTPEYVRAYCEGSLEAKLQRRIG
LPWSPELVQRTCRAVGGTVLTAQLALRHGLACNTAGGTHHAFPAYGSGFCIFNDLAIAAQVLLQQGLVQRLLIVDLDVHQ
GDGTAWIFRSEPRVFTFSMHCEANFPATKQQSDLDVPLPVGMEDEAYLQTLADHLPDLLAQVRPDLVLYDAGVDPHEEDL
LGKLALSDQGLFRRDMQVLNTCLKQGYPVACVIGGGYGKDLNRLVYRHSLLHRAASEVYRQYRL

Specific function: Putative deacetylase [H]

COG id: COG0123

COG function: function code BQ; Deacetylases, including yeast histone deacetylase and acetoin utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone deacetylase family [H]

Homologues:

Organism=Homo sapiens, GI217272877, Length=296, Percent_Identity=29.7297297297297, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI209862883, Length=195, Percent_Identity=33.8461538461538, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI293336691, Length=256, Percent_Identity=28.90625, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI13128860, Length=256, Percent_Identity=28.125, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI8923769, Length=301, Percent_Identity=25.9136212624585, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI13128864, Length=273, Percent_Identity=29.3040293040293, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI262073092, Length=234, Percent_Identity=26.9230769230769, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI20070354, Length=249, Percent_Identity=31.7269076305221, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI13128862, Length=284, Percent_Identity=26.7605633802817, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI17158039, Length=146, Percent_Identity=33.5616438356164, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI30795204, Length=146, Percent_Identity=33.5616438356164, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI30795202, Length=146, Percent_Identity=33.5616438356164, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI153085395, Length=146, Percent_Identity=33.5616438356164, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI169234807, Length=177, Percent_Identity=31.0734463276836, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI148539870, Length=177, Percent_Identity=31.0734463276836, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI62750349, Length=152, Percent_Identity=32.2368421052632, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI62750347, Length=152, Percent_Identity=32.2368421052632, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI226529806, Length=136, Percent_Identity=36.7647058823529, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI193207430, Length=306, Percent_Identity=30.3921568627451, Blast_Score=130, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI17508561, Length=288, Percent_Identity=28.125, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17534739, Length=200, Percent_Identity=29.5, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17561978, Length=285, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI25154020, Length=262, Percent_Identity=27.8625954198473, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI25154022, Length=262, Percent_Identity=27.4809160305344, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17537347, Length=207, Percent_Identity=31.4009661835749, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193206283, Length=176, Percent_Identity=31.25, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17540332, Length=176, Percent_Identity=31.25, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17540334, Length=176, Percent_Identity=31.25, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI193209491, Length=168, Percent_Identity=32.1428571428571, Blast_Score=73, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323999, Length=283, Percent_Identity=26.5017667844523, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6321244, Length=299, Percent_Identity=27.4247491638796, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6325325, Length=203, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6324307, Length=143, Percent_Identity=28.6713286713287, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24649807, Length=293, Percent_Identity=31.740614334471, Blast_Score=127, Evalue=6e-30,
Organism=Drosophila melanogaster, GI24657891, Length=283, Percent_Identity=28.9752650176678, Blast_Score=98, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24644244, Length=295, Percent_Identity=25.7627118644068, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24642144, Length=189, Percent_Identity=32.2751322751323, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24642146, Length=189, Percent_Identity=32.2751322751323, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24642142, Length=189, Percent_Identity=32.2751322751323, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI281360899, Length=189, Percent_Identity=32.8042328042328, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24641720, Length=204, Percent_Identity=28.921568627451, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281360801, Length=204, Percent_Identity=28.921568627451, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281360799, Length=204, Percent_Identity=28.921568627451, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000286 [H]

Pfam domain/function: PF00850 Hist_deacetyl [H]

EC number: NA

Molecular weight: Translated: 34123; Mature: 33992

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPIVYHPDYSAPLPPGHRFPMPKFRLLQELLLREGVIRPQQVHHPELPPLAWIESVHT
CCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHCCC
PEYVRAYCEGSLEAKLQRRIGLPWSPELVQRTCRAVGGTVLTAQLALRHGLACNTAGGTH
HHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCEECCCCCCC
HAFPAYGSGFCIFNDLAIAAQVLLQQGLVQRLLIVDLDVHQGDGTAWIFRSEPRVFTFSM
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCEEEEEE
HCEANFPATKQQSDLDVPLPVGMEDEAYLQTLADHLPDLLAQVRPDLVLYDAGVDPHEED
EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH
LLGKLALSDQGLFRRDMQVLNTCLKQGYPVACVIGGGYGKDLNRLVYRHSLLHRAASEVY
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
RQYRL
HHHCC
>Mature Secondary Structure 
SLPIVYHPDYSAPLPPGHRFPMPKFRLLQELLLREGVIRPQQVHHPELPPLAWIESVHT
CCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHCCC
PEYVRAYCEGSLEAKLQRRIGLPWSPELVQRTCRAVGGTVLTAQLALRHGLACNTAGGTH
HHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCEECCCCCCC
HAFPAYGSGFCIFNDLAIAAQVLLQQGLVQRLLIVDLDVHQGDGTAWIFRSEPRVFTFSM
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCEEEEEE
HCEANFPATKQQSDLDVPLPVGMEDEAYLQTLADHLPDLLAQVRPDLVLYDAGVDPHEED
EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH
LLGKLALSDQGLFRRDMQVLNTCLKQGYPVACVIGGGYGKDLNRLVYRHSLLHRAASEVY
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
RQYRL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7678591 [H]