| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608393
Identifier: 86608393
GI number: 86608393
Start: 951191
End: 951475
Strand: Reverse
Name: 86608393
Synonym: CYB_0913
Alternate gene names: NA
Gene position: 951475-951191 (Counterclockwise)
Preceding gene: 86608397
Following gene: 86608391
Centisome position: 31.23
GC content: 61.4
Gene sequence:
>285_bases TTGCCGTTCATGCTGTCCATTCCCGATTACGAGCGGCGGGACATCCAAGTGCCACTCTCGTGCATCCCCGTTGCCGCCCG GGCCTTGATCCGGCAGGGGGTATCCGTCTGCTGGCGGGAAGAAAGCCTGTCTGCCTTGATTCGTCTGGGATCCAAAGGAG CCGCCGACCGAGCCGCCATTCTGCTGGTGGAAATGAGCCTCATGGGCCAACCTGAGGAGCTAAAAAGCTGGCTGGAGATG TGCTGGCAACTGCCCGCTTGTCCCAGGGAACCGCTGCAGGTGTAG
Upstream 100 bases:
>100_bases AGAACTCTACAAAGTTCACAAAAGATCACTTCATACTTTGCAAAGACCCGTGACGGACAGGCGAAAAGGGAAGAAGATTA AGACATAATAAAGATTTGGG
Downstream 100 bases:
>100_bases GGGTACCCTCTGTGGACGAATGCGGGATCGGCTTCTGTAGCTATTCCTCTGTAGCTACTCTGAACATGTCTAAGACATCC CCCGCCGCCTTGCCCTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MPFMLSIPDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAILLVEMSLMGQPEELKSWLEM CWQLPACPREPLQV
Sequences:
>Translated_94_residues MPFMLSIPDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAILLVEMSLMGQPEELKSWLEM CWQLPACPREPLQV >Mature_93_residues PFMLSIPDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAILLVEMSLMGQPEELKSWLEMC WQLPACPREPLQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10567; Mature: 10435
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFMLSIPDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAI CCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LLVEMSLMGQPEELKSWLEMCWQLPACPREPLQV HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PFMLSIPDYERRDIQVPLSCIPVAARALIRQGVSVCWREESLSALIRLGSKGAADRAAI CEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LLVEMSLMGQPEELKSWLEMCWQLPACPREPLQV HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA