| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is cphA [H]
Identifier: 86608391
GI number: 86608391
Start: 945778
End: 948474
Strand: Reverse
Name: cphA [H]
Synonym: CYB_0911
Alternate gene names: 86608391
Gene position: 948474-945778 (Counterclockwise)
Preceding gene: 86608393
Following gene: 86608390
Centisome position: 31.13
GC content: 59.14
Gene sequence:
>2697_bases ATGCGCATCCGATCCATCCGCGTTCTCAGTGGCCCCAACTACTGGAGCATCCGTCGTCATAAGCTGATTCAAATGCGGCT TGATCTGGAAGACTTGCAGGAGCGACCCACCAACACCATCCCGGGTTTCAAAGAAAGGTTGGAGGCCCTGTTGCCGGGAC TGTGGGAACACCAGTGCTCCCGCGGCTGCTATGGGGGATTCTTGCAACGGGTGGAAGAGGGCACCCTCATGGGCCATGTG GTGGAGCATGTGGCCTTGGAACTGCAGACTCTGGCCGGCATGAAAGTGGATTTTGGCCGCACCCGCGAAACCTCCACCCC CGGCACCTACAACGTCGTGTTCGAGTATCAAGAGGCAGAGGCCGGGCGCTTTGCGGCCAAAGCTGCAGTCTACCTCTGTC AGGCTTTGGTGGATGGAGAAGACTACCGCCGCGACCTAGAACTGGACATTCAAGAGTTGCGAGAGATCCGAGAGAACGTC CGCTTCGGCCCCAGCACCCAAGCTTTGCTGGACGAGGCCGCCCTGCGCGGGATCCCCTATCTGCGCCTCAACAAGGGATC CCTGGTGCAACTGGGGTACGGCGTCTACCAAAAGCGCATCGAAGCCACCACCACTGAAAAAACCAGCATCATTGCCGCCG ACCTGGCCGCCGACAAGCGGGCCACCAAAGAACTGCTGCAGGACATGGGGATCCCGGTGCCCAAGGGCTATACGGTGCGT CGCCGCAGCGAGTTGGCAGCCACCATCGAGGATGTCGGGGGCTTTCCGGTGGTGATCAAGCCCCTTAACGCCAACCACGG CAAGGGCATCACCGTCAACATCACCAGCCTGGAAGCCGCCGAGATCGCCTACGATGCCGCCAGCCAATACTCCGATGTGG TGTTGGTGGAAAAGCACCTGGTGGGGGATGACTACCGACTGCTGGTGATCAACAACAAGCTGGTGGCTGTGGCCAAGCGG ATCCCAGCCTATGTGGTGGGAGATGGCCGCTCCACCATTCAAGAGCTGATCGACGAAGTCAACAGGGATCCGCGGCGGGG GTTTGGCCACGAAAACGTGCTGACCCAAATCAGCGTTGATGACATGACCCTGCGTATCCTCGAAAGCAAAGGCTACACCC TGGATACGGTGCTGCCCAAAGGAGAACATTGCACCCTCAAATCCACCGCCAACCTGAGCACCGGAGGCATCGCCGTCGAT TGCACCGATATCATCCATCCCTACAACGCCTTCATTGCCGAACGGGCAGCTCAGATCATCGGCCTGGATGTGGCGGGCAT CGACCTCATCTGCCCGGACATTGCCCAGCCCGTCAACGAAACCGGGGGCGGCATTGTCGAGGTGAACGCTTCTCCGGGTT TGCGCATGCACCTGGCCCCCAGCGAAGGGATCCCGCGCAATGTGGCTGAGCCCATCATCGACATGCTCTTTCCCCCCGGC AGCCACACCCGCATCCCCATCCTGGCCGTCACCGGCACCAACGGCAAAACCACCACCACCCGCCTGATCGCCCACATCCT CAAAGGCATCGGCAAGCGGGTCGGCTTTACCACCACCGACGGCGTTTACATCCAAAACCATCAAATTGCCAAGGGAGACA TGACCGGCCCCCACAGCGCCCGCCTGGTGCTCAGGGATCCCACCGTAGAAGTGGCGGTGCTGGAAACGGCGCGAGGCGGC ATTTTGCGAGAGGGGCTGGGGTTTCCGGAATGCGATATTGGCGTGGTGCTCAACGTAACCTCAGATCACCTAGGGTTGGG GGATATCGAAACCCTAGAAGACATGGCCCGCGTCAAATCCGTCTTGGTGGAAGCGGTACACGAGCGGGGCTACGCTGTCT TGAATGCCGATGATGGTCTGGTGGCCGCCATGGCCGCCAATGTCAAGGCGACAGTGGCCTATTTCAGCATGAACCCGGAA AATCCCCTCATTCAAAAGCACATTGCTTCCGGGGGCATAGCAGCTGTCTATGAAGAGGGCCACATCTCAATTTTGAAACG GGGCTGGAAACTGCGCATAGAAGATGTAACCAAAATTCCCCTCACCCTCTCTGGCAAGGCCAGCTTCATGATCCAAAATG TGCTGGCCGCTACTTTGGCAGCCTTCCTGCACGGGGTTTCCATCGACGACATCCGCATGGCGCTGGGCACCTTCACCAGT TCTGTGGCCCAAACCCCTGGTCGCCTCAACTTGTTCGATGTGGGGGGCTACCAAGTGCTGGTTGACTATGCCCACAACCC AGCAGGTTACGAAGCCATTCAAAGTACCCTGGAGCGCTGGGATTGCCAACGAAAAATTGGGGTTATCGGCGGGCCTGGGG ATCGGCGCAACAGCGACCTACGAGAGCTGGGAGTCTTGGCAGCGCGCATGTTCGACCGAGCCATTGTCAAAGAAGATGAT GACCGGCGAGGACGGGAACCAGGCGAGGTGGCCGCCCTAATCCGGCAGGGTTGGGAACAGGAAAAGGCAGGGGATCGTCT GCAGGAAATCTTGGATGAGGCAACTGCTATCGAAACCGCTCTGGAGAAAGCCGAACCCGGAGACCTGGTGGTGATCTTTC CGGCGGATGTACAGCGCACCATCCAGATCATCACCCGCTTTCAAGACAAGCTCAACCCCAAACCCAGTTACCGTGGCTCC TCCTACAGCATCGGCCCAGATTTGATCTCCCCCAGCCCTGACGTCAAACTGTCTTAG
Upstream 100 bases:
>100_bases GGATGTAGTCCTTGGCAGTTTCCTGCGCCGGCATCCTGAAAACGACCCTAAAACGACCCTAAGTTATCTGTCCCCTTCCC CGCTGTTTCCCCTAGACCCT
Downstream 100 bases:
>100_bases GCTGGCTGCCGACAACTCCAGAGTGCTCTATGGCCTCCATTCCTGGACAGACATCGAGAATTGAGTGGGCGGAGGTGACC CATAAGTCCTCGGCGGCGAT
Product: cyanophycin synthetase
Products: NA
Alternate protein names: Cyanophycin synthase [H]
Number of amino acids: Translated: 898; Mature: 898
Protein sequence:
>898_residues MRIRSIRVLSGPNYWSIRRHKLIQMRLDLEDLQERPTNTIPGFKERLEALLPGLWEHQCSRGCYGGFLQRVEEGTLMGHV VEHVALELQTLAGMKVDFGRTRETSTPGTYNVVFEYQEAEAGRFAAKAAVYLCQALVDGEDYRRDLELDIQELREIRENV RFGPSTQALLDEAALRGIPYLRLNKGSLVQLGYGVYQKRIEATTTEKTSIIAADLAADKRATKELLQDMGIPVPKGYTVR RRSELAATIEDVGGFPVVIKPLNANHGKGITVNITSLEAAEIAYDAASQYSDVVLVEKHLVGDDYRLLVINNKLVAVAKR IPAYVVGDGRSTIQELIDEVNRDPRRGFGHENVLTQISVDDMTLRILESKGYTLDTVLPKGEHCTLKSTANLSTGGIAVD CTDIIHPYNAFIAERAAQIIGLDVAGIDLICPDIAQPVNETGGGIVEVNASPGLRMHLAPSEGIPRNVAEPIIDMLFPPG SHTRIPILAVTGTNGKTTTTRLIAHILKGIGKRVGFTTTDGVYIQNHQIAKGDMTGPHSARLVLRDPTVEVAVLETARGG ILREGLGFPECDIGVVLNVTSDHLGLGDIETLEDMARVKSVLVEAVHERGYAVLNADDGLVAAMAANVKATVAYFSMNPE NPLIQKHIASGGIAAVYEEGHISILKRGWKLRIEDVTKIPLTLSGKASFMIQNVLAATLAAFLHGVSIDDIRMALGTFTS SVAQTPGRLNLFDVGGYQVLVDYAHNPAGYEAIQSTLERWDCQRKIGVIGGPGDRRNSDLRELGVLAARMFDRAIVKEDD DRRGREPGEVAALIRQGWEQEKAGDRLQEILDEATAIETALEKAEPGDLVVIFPADVQRTIQIITRFQDKLNPKPSYRGS SYSIGPDLISPSPDVKLS
Sequences:
>Translated_898_residues MRIRSIRVLSGPNYWSIRRHKLIQMRLDLEDLQERPTNTIPGFKERLEALLPGLWEHQCSRGCYGGFLQRVEEGTLMGHV VEHVALELQTLAGMKVDFGRTRETSTPGTYNVVFEYQEAEAGRFAAKAAVYLCQALVDGEDYRRDLELDIQELREIRENV RFGPSTQALLDEAALRGIPYLRLNKGSLVQLGYGVYQKRIEATTTEKTSIIAADLAADKRATKELLQDMGIPVPKGYTVR RRSELAATIEDVGGFPVVIKPLNANHGKGITVNITSLEAAEIAYDAASQYSDVVLVEKHLVGDDYRLLVINNKLVAVAKR IPAYVVGDGRSTIQELIDEVNRDPRRGFGHENVLTQISVDDMTLRILESKGYTLDTVLPKGEHCTLKSTANLSTGGIAVD CTDIIHPYNAFIAERAAQIIGLDVAGIDLICPDIAQPVNETGGGIVEVNASPGLRMHLAPSEGIPRNVAEPIIDMLFPPG SHTRIPILAVTGTNGKTTTTRLIAHILKGIGKRVGFTTTDGVYIQNHQIAKGDMTGPHSARLVLRDPTVEVAVLETARGG ILREGLGFPECDIGVVLNVTSDHLGLGDIETLEDMARVKSVLVEAVHERGYAVLNADDGLVAAMAANVKATVAYFSMNPE NPLIQKHIASGGIAAVYEEGHISILKRGWKLRIEDVTKIPLTLSGKASFMIQNVLAATLAAFLHGVSIDDIRMALGTFTS SVAQTPGRLNLFDVGGYQVLVDYAHNPAGYEAIQSTLERWDCQRKIGVIGGPGDRRNSDLRELGVLAARMFDRAIVKEDD DRRGREPGEVAALIRQGWEQEKAGDRLQEILDEATAIETALEKAEPGDLVVIFPADVQRTIQIITRFQDKLNPKPSYRGS SYSIGPDLISPSPDVKLS >Mature_898_residues MRIRSIRVLSGPNYWSIRRHKLIQMRLDLEDLQERPTNTIPGFKERLEALLPGLWEHQCSRGCYGGFLQRVEEGTLMGHV VEHVALELQTLAGMKVDFGRTRETSTPGTYNVVFEYQEAEAGRFAAKAAVYLCQALVDGEDYRRDLELDIQELREIRENV RFGPSTQALLDEAALRGIPYLRLNKGSLVQLGYGVYQKRIEATTTEKTSIIAADLAADKRATKELLQDMGIPVPKGYTVR RRSELAATIEDVGGFPVVIKPLNANHGKGITVNITSLEAAEIAYDAASQYSDVVLVEKHLVGDDYRLLVINNKLVAVAKR IPAYVVGDGRSTIQELIDEVNRDPRRGFGHENVLTQISVDDMTLRILESKGYTLDTVLPKGEHCTLKSTANLSTGGIAVD CTDIIHPYNAFIAERAAQIIGLDVAGIDLICPDIAQPVNETGGGIVEVNASPGLRMHLAPSEGIPRNVAEPIIDMLFPPG SHTRIPILAVTGTNGKTTTTRLIAHILKGIGKRVGFTTTDGVYIQNHQIAKGDMTGPHSARLVLRDPTVEVAVLETARGG ILREGLGFPECDIGVVLNVTSDHLGLGDIETLEDMARVKSVLVEAVHERGYAVLNADDGLVAAMAANVKATVAYFSMNPE NPLIQKHIASGGIAAVYEEGHISILKRGWKLRIEDVTKIPLTLSGKASFMIQNVLAATLAAFLHGVSIDDIRMALGTFTS SVAQTPGRLNLFDVGGYQVLVDYAHNPAGYEAIQSTLERWDCQRKIGVIGGPGDRRNSDLRELGVLAARMFDRAIVKEDD DRRGREPGEVAALIRQGWEQEKAGDRLQEILDEATAIETALEKAEPGDLVVIFPADVQRTIQIITRFQDKLNPKPSYRGS SYSIGPDLISPSPDVKLS
Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]
COG id: COG1181
COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013651 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011810 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]
EC number: =6.3.2.29; =6.3.2.30 [H]
Molecular weight: Translated: 98115; Mature: 98115
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS50975 ATP_GRASP ; PS01011 FOLYLPOLYGLU_SYNT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRSIRVLSGPNYWSIRRHKLIQMRLDLEDLQERPTNTIPGFKERLEALLPGLWEHQCS CCCEEEEEECCCCEEEHHHHEEEEEECCHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHC RGCYGGFLQRVEEGTLMGHVVEHVALELQTLAGMKVDFGRTRETSTPGTYNVVFEYQEAE CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEEECCCC AGRFAAKAAVYLCQALVDGEDYRRDLELDIQELREIRENVRFGPSTQALLDEAALRGIPY CCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCE LRLNKGSLVQLGYGVYQKRIEATTTEKTSIIAADLAADKRATKELLQDMGIPVPKGYTVR EEECCCCEEEECHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEH RRSELAATIEDVGGFPVVIKPLNANHGKGITVNITSLEAAEIAYDAASQYSDVVLVEKHL HHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEHHH VGDDYRLLVINNKLVAVAKRIPAYVVGDGRSTIQELIDEVNRDPRRGFGHENVLTQISVD CCCCEEEEEECCHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC DMTLRILESKGYTLDTVLPKGEHCTLKSTANLSTGGIAVDCTDIIHPYNAFIAERAAQII CEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHE GLDVAGIDLICPDIAQPVNETGGGIVEVNASPGLRMHLAPSEGIPRNVAEPIIDMLFPPG EEEECCCEEECCHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCC SHTRIPILAVTGTNGKTTTTRLIAHILKGIGKRVGFTTTDGVYIQNHQIAKGDMTGPHSA CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEECCCCCCCCCC RLVLRDPTVEVAVLETARGGILREGLGFPECDIGVVLNVTSDHLGLGDIETLEDMARVKS EEEEECCCEEEEEEECCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH VLVEAVHERGYAVLNADDGLVAAMAANVKATVAYFSMNPENPLIQKHIASGGIAAVYEEG HHHHHHHHCCEEEEECCCCEEEEHHCCCEEEEEEEEECCCCHHHHHHHCCCCEEEEEECC HISILKRGWKLRIEDVTKIPLTLSGKASFMIQNVLAATLAAFLHGVSIDDIRMALGTFTS CCEEECCCCEEEEECCEECCEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SVAQTPGRLNLFDVGGYQVLVDYAHNPAGYEAIQSTLERWDCQRKIGVIGGPGDRRNSDL HHHCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCHHHHCCEEECCCCCCCCHH RELGVLAARMFDRAIVKEDDDRRGREPGEVAALIRQGWEQEKAGDRLQEILDEATAIETA HHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LEKAEPGDLVVIFPADVQRTIQIITRFQDKLNPKPSYRGSSYSIGPDLISPSPDVKLS HHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRIRSIRVLSGPNYWSIRRHKLIQMRLDLEDLQERPTNTIPGFKERLEALLPGLWEHQCS CCCEEEEEECCCCEEEHHHHEEEEEECCHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHC RGCYGGFLQRVEEGTLMGHVVEHVALELQTLAGMKVDFGRTRETSTPGTYNVVFEYQEAE CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEEECCCC AGRFAAKAAVYLCQALVDGEDYRRDLELDIQELREIRENVRFGPSTQALLDEAALRGIPY CCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCE LRLNKGSLVQLGYGVYQKRIEATTTEKTSIIAADLAADKRATKELLQDMGIPVPKGYTVR EEECCCCEEEECHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEH RRSELAATIEDVGGFPVVIKPLNANHGKGITVNITSLEAAEIAYDAASQYSDVVLVEKHL HHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEHHH VGDDYRLLVINNKLVAVAKRIPAYVVGDGRSTIQELIDEVNRDPRRGFGHENVLTQISVD CCCCEEEEEECCHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC DMTLRILESKGYTLDTVLPKGEHCTLKSTANLSTGGIAVDCTDIIHPYNAFIAERAAQII CEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCEEEEHHHHHCHHHHHHHHHHHHHE GLDVAGIDLICPDIAQPVNETGGGIVEVNASPGLRMHLAPSEGIPRNVAEPIIDMLFPPG EEEECCCEEECCHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCC SHTRIPILAVTGTNGKTTTTRLIAHILKGIGKRVGFTTTDGVYIQNHQIAKGDMTGPHSA CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEECCCCCCCCCC RLVLRDPTVEVAVLETARGGILREGLGFPECDIGVVLNVTSDHLGLGDIETLEDMARVKS EEEEECCCEEEEEEECCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH VLVEAVHERGYAVLNADDGLVAAMAANVKATVAYFSMNPENPLIQKHIASGGIAAVYEEG HHHHHHHHCCEEEEECCCCEEEEHHCCCEEEEEEEEECCCCHHHHHHHCCCCEEEEEECC HISILKRGWKLRIEDVTKIPLTLSGKASFMIQNVLAATLAAFLHGVSIDDIRMALGTFTS CCEEECCCCEEEEECCEECCEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SVAQTPGRLNLFDVGGYQVLVDYAHNPAGYEAIQSTLERWDCQRKIGVIGGPGDRRNSDL HHHCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCHHHHCCEEECCCCCCCCHH RELGVLAARMFDRAIVKEDDDRRGREPGEVAALIRQGWEQEKAGDRLQEILDEATAIETA HHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LEKAEPGDLVVIFPADVQRTIQIITRFQDKLNPKPSYRGSSYSIGPDLISPSPDVKLS HHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]