Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608379
Identifier: 86608379
GI number: 86608379
Start: 931957
End: 932838
Strand: Direct
Name: 86608379
Synonym: CYB_0899
Alternate gene names: NA
Gene position: 931957-932838 (Clockwise)
Preceding gene: 86608378
Following gene: 86608383
Centisome position: 30.59
GC content: 59.52
Gene sequence:
>882_bases GTGCTGAAAGAACTGGAGCGATTCCGCCTCTGGCAGCGTTTGCAGCGCATGGACTCTGTCCCGCCCCCACGAGCAGGTCA GCTTGGGAATACCAGCTCTGTACAGCGCCCTTCACCTGTGCTCATTCAAGAGGTGGTGGAAGACTTGGAAGAGGAAGAGA TGCCGCGGCCCTCCGGGGCCTTTTCGCCCCTCTGGGTCTTGCTGCTGTGGGTGCTTTCCTGCGCGGGGATTGGCTTTGGG GTGCGCTGGCTGATCTGGCCGGAAGAACTGTCCCTGCCCCAAAGTGCTGCCAGCAGGGCGGAAGAAGGGATCCCTGCCCA GGTGGATCTGGCCCAGTTGCCCCTGATCCCACTGGAACCGGTGGAAGGGCAGGTGGGAGAGGAGTTCTATTTCGGTGGCT TGGATCCGGATCGGCTGGCGCTGGGCTTGGCGGCCACCCCGGACTGGAAGGACTTGCAGGTGGATCCTCTTCAAGGCGTT CCTAACCTGCTGGACAGCCTGCAGACCGACTTGGCCTTGGCTTCCAAGGAACCCTCTCCCCCCAGCTTGCAAACGGTGGA GCAGTTGGCAGCCAGCCTGGAGCGCCCGTCCCAACCTTCATCGCCTACTTCTGCGGGATCCCAGAACGTGGTGCCCCTAA GCGAAAACAACATAGACTCCCTGGGGCCGAACCGCGGCGAGGGAACCTTCTTGGTGCTCACTACCTACTCGGGAGATGAG AGCTTGGCACGTGCTCGAGAAGTTTCTGATGGGGCCTTTGTCAAAGATGTGAATGGCCAGAAGTTTGTGCAGTTGGCAGC ATTTGAGCAACTGGAGTATGCCCGCTATCATGCGGAAACCCTGAAAAATAAGGGCTTTAACGTTACGATTGCTGAGCAGT AG
Upstream 100 bases:
>100_bases CCCAGACCCTACCCAACCCCTGTCTCCGGCACAGCAGTCCCATTCACATCCAGTTCCTCAACTTGCTCTTCAGGAGGCGC TGAGCCATCTGCATTTGGAT
Downstream 100 bases:
>100_bases CTTTGAGGACTACAGATCCCGAATCCAAGGGATCCGAGAGAGAGGTAGCCGCCGCCAGATCCCTTCACTTCCTTCTGGAT CGAGCAGGCGCCAGGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MLKELERFRLWQRLQRMDSVPPPRAGQLGNTSSVQRPSPVLIQEVVEDLEEEEMPRPSGAFSPLWVLLLWVLSCAGIGFG VRWLIWPEELSLPQSAASRAEEGIPAQVDLAQLPLIPLEPVEGQVGEEFYFGGLDPDRLALGLAATPDWKDLQVDPLQGV PNLLDSLQTDLALASKEPSPPSLQTVEQLAASLERPSQPSSPTSAGSQNVVPLSENNIDSLGPNRGEGTFLVLTTYSGDE SLARAREVSDGAFVKDVNGQKFVQLAAFEQLEYARYHAETLKNKGFNVTIAEQ
Sequences:
>Translated_293_residues MLKELERFRLWQRLQRMDSVPPPRAGQLGNTSSVQRPSPVLIQEVVEDLEEEEMPRPSGAFSPLWVLLLWVLSCAGIGFG VRWLIWPEELSLPQSAASRAEEGIPAQVDLAQLPLIPLEPVEGQVGEEFYFGGLDPDRLALGLAATPDWKDLQVDPLQGV PNLLDSLQTDLALASKEPSPPSLQTVEQLAASLERPSQPSSPTSAGSQNVVPLSENNIDSLGPNRGEGTFLVLTTYSGDE SLARAREVSDGAFVKDVNGQKFVQLAAFEQLEYARYHAETLKNKGFNVTIAEQ >Mature_293_residues MLKELERFRLWQRLQRMDSVPPPRAGQLGNTSSVQRPSPVLIQEVVEDLEEEEMPRPSGAFSPLWVLLLWVLSCAGIGFG VRWLIWPEELSLPQSAASRAEEGIPAQVDLAQLPLIPLEPVEGQVGEEFYFGGLDPDRLALGLAATPDWKDLQVDPLQGV PNLLDSLQTDLALASKEPSPPSLQTVEQLAASLERPSQPSSPTSAGSQNVVPLSENNIDSLGPNRGEGTFLVLTTYSGDE SLARAREVSDGAFVKDVNGQKFVQLAAFEQLEYARYHAETLKNKGFNVTIAEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32050; Mature: 32050
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKELERFRLWQRLQRMDSVPPPRAGQLGNTSSVQRPSPVLIQEVVEDLEEEEMPRPSGA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC FSPLWVLLLWVLSCAGIGFGVRWLIWPEELSLPQSAASRAEEGIPAQVDLAQLPLIPLEP CCHHHHHHHHHHHHHCCCCCEEEEECHHHHCCCHHHHHHHHCCCCCEECHHHCCCCCCCC VEGQVGEEFYFGGLDPDRLALGLAATPDWKDLQVDPLQGVPNLLDSLQTDLALASKEPSP CCCCCCCEEEECCCCHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC PSLQTVEQLAASLERPSQPSSPTSAGSQNVVPLSENNIDSLGPNRGEGTFLVLTTYSGDE CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCEEEEEEEECCCH SLARAREVSDGAFVKDVNGQKFVQLAAFEQLEYARYHAETLKNKGFNVTIAEQ HHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MLKELERFRLWQRLQRMDSVPPPRAGQLGNTSSVQRPSPVLIQEVVEDLEEEEMPRPSGA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC FSPLWVLLLWVLSCAGIGFGVRWLIWPEELSLPQSAASRAEEGIPAQVDLAQLPLIPLEP CCHHHHHHHHHHHHHCCCCCEEEEECHHHHCCCHHHHHHHHCCCCCEECHHHCCCCCCCC VEGQVGEEFYFGGLDPDRLALGLAATPDWKDLQVDPLQGVPNLLDSLQTDLALASKEPSP CCCCCCCEEEECCCCHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC PSLQTVEQLAASLERPSQPSSPTSAGSQNVVPLSENNIDSLGPNRGEGTFLVLTTYSGDE CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCEEEEEEEECCCH SLARAREVSDGAFVKDVNGQKFVQLAAFEQLEYARYHAETLKNKGFNVTIAEQ HHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA