Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608379

Identifier: 86608379

GI number: 86608379

Start: 931957

End: 932838

Strand: Direct

Name: 86608379

Synonym: CYB_0899

Alternate gene names: NA

Gene position: 931957-932838 (Clockwise)

Preceding gene: 86608378

Following gene: 86608383

Centisome position: 30.59

GC content: 59.52

Gene sequence:

>882_bases
GTGCTGAAAGAACTGGAGCGATTCCGCCTCTGGCAGCGTTTGCAGCGCATGGACTCTGTCCCGCCCCCACGAGCAGGTCA
GCTTGGGAATACCAGCTCTGTACAGCGCCCTTCACCTGTGCTCATTCAAGAGGTGGTGGAAGACTTGGAAGAGGAAGAGA
TGCCGCGGCCCTCCGGGGCCTTTTCGCCCCTCTGGGTCTTGCTGCTGTGGGTGCTTTCCTGCGCGGGGATTGGCTTTGGG
GTGCGCTGGCTGATCTGGCCGGAAGAACTGTCCCTGCCCCAAAGTGCTGCCAGCAGGGCGGAAGAAGGGATCCCTGCCCA
GGTGGATCTGGCCCAGTTGCCCCTGATCCCACTGGAACCGGTGGAAGGGCAGGTGGGAGAGGAGTTCTATTTCGGTGGCT
TGGATCCGGATCGGCTGGCGCTGGGCTTGGCGGCCACCCCGGACTGGAAGGACTTGCAGGTGGATCCTCTTCAAGGCGTT
CCTAACCTGCTGGACAGCCTGCAGACCGACTTGGCCTTGGCTTCCAAGGAACCCTCTCCCCCCAGCTTGCAAACGGTGGA
GCAGTTGGCAGCCAGCCTGGAGCGCCCGTCCCAACCTTCATCGCCTACTTCTGCGGGATCCCAGAACGTGGTGCCCCTAA
GCGAAAACAACATAGACTCCCTGGGGCCGAACCGCGGCGAGGGAACCTTCTTGGTGCTCACTACCTACTCGGGAGATGAG
AGCTTGGCACGTGCTCGAGAAGTTTCTGATGGGGCCTTTGTCAAAGATGTGAATGGCCAGAAGTTTGTGCAGTTGGCAGC
ATTTGAGCAACTGGAGTATGCCCGCTATCATGCGGAAACCCTGAAAAATAAGGGCTTTAACGTTACGATTGCTGAGCAGT
AG

Upstream 100 bases:

>100_bases
CCCAGACCCTACCCAACCCCTGTCTCCGGCACAGCAGTCCCATTCACATCCAGTTCCTCAACTTGCTCTTCAGGAGGCGC
TGAGCCATCTGCATTTGGAT

Downstream 100 bases:

>100_bases
CTTTGAGGACTACAGATCCCGAATCCAAGGGATCCGAGAGAGAGGTAGCCGCCGCCAGATCCCTTCACTTCCTTCTGGAT
CGAGCAGGCGCCAGGCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MLKELERFRLWQRLQRMDSVPPPRAGQLGNTSSVQRPSPVLIQEVVEDLEEEEMPRPSGAFSPLWVLLLWVLSCAGIGFG
VRWLIWPEELSLPQSAASRAEEGIPAQVDLAQLPLIPLEPVEGQVGEEFYFGGLDPDRLALGLAATPDWKDLQVDPLQGV
PNLLDSLQTDLALASKEPSPPSLQTVEQLAASLERPSQPSSPTSAGSQNVVPLSENNIDSLGPNRGEGTFLVLTTYSGDE
SLARAREVSDGAFVKDVNGQKFVQLAAFEQLEYARYHAETLKNKGFNVTIAEQ

Sequences:

>Translated_293_residues
MLKELERFRLWQRLQRMDSVPPPRAGQLGNTSSVQRPSPVLIQEVVEDLEEEEMPRPSGAFSPLWVLLLWVLSCAGIGFG
VRWLIWPEELSLPQSAASRAEEGIPAQVDLAQLPLIPLEPVEGQVGEEFYFGGLDPDRLALGLAATPDWKDLQVDPLQGV
PNLLDSLQTDLALASKEPSPPSLQTVEQLAASLERPSQPSSPTSAGSQNVVPLSENNIDSLGPNRGEGTFLVLTTYSGDE
SLARAREVSDGAFVKDVNGQKFVQLAAFEQLEYARYHAETLKNKGFNVTIAEQ
>Mature_293_residues
MLKELERFRLWQRLQRMDSVPPPRAGQLGNTSSVQRPSPVLIQEVVEDLEEEEMPRPSGAFSPLWVLLLWVLSCAGIGFG
VRWLIWPEELSLPQSAASRAEEGIPAQVDLAQLPLIPLEPVEGQVGEEFYFGGLDPDRLALGLAATPDWKDLQVDPLQGV
PNLLDSLQTDLALASKEPSPPSLQTVEQLAASLERPSQPSSPTSAGSQNVVPLSENNIDSLGPNRGEGTFLVLTTYSGDE
SLARAREVSDGAFVKDVNGQKFVQLAAFEQLEYARYHAETLKNKGFNVTIAEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32050; Mature: 32050

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKELERFRLWQRLQRMDSVPPPRAGQLGNTSSVQRPSPVLIQEVVEDLEEEEMPRPSGA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
FSPLWVLLLWVLSCAGIGFGVRWLIWPEELSLPQSAASRAEEGIPAQVDLAQLPLIPLEP
CCHHHHHHHHHHHHHCCCCCEEEEECHHHHCCCHHHHHHHHCCCCCEECHHHCCCCCCCC
VEGQVGEEFYFGGLDPDRLALGLAATPDWKDLQVDPLQGVPNLLDSLQTDLALASKEPSP
CCCCCCCEEEECCCCHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PSLQTVEQLAASLERPSQPSSPTSAGSQNVVPLSENNIDSLGPNRGEGTFLVLTTYSGDE
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCEEEEEEEECCCH
SLARAREVSDGAFVKDVNGQKFVQLAAFEQLEYARYHAETLKNKGFNVTIAEQ
HHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MLKELERFRLWQRLQRMDSVPPPRAGQLGNTSSVQRPSPVLIQEVVEDLEEEEMPRPSGA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
FSPLWVLLLWVLSCAGIGFGVRWLIWPEELSLPQSAASRAEEGIPAQVDLAQLPLIPLEP
CCHHHHHHHHHHHHHCCCCCEEEEECHHHHCCCHHHHHHHHCCCCCEECHHHCCCCCCCC
VEGQVGEEFYFGGLDPDRLALGLAATPDWKDLQVDPLQGVPNLLDSLQTDLALASKEPSP
CCCCCCCEEEECCCCHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PSLQTVEQLAASLERPSQPSSPTSAGSQNVVPLSENNIDSLGPNRGEGTFLVLTTYSGDE
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCEEEEEEEECCCH
SLARAREVSDGAFVKDVNGQKFVQLAAFEQLEYARYHAETLKNKGFNVTIAEQ
HHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA