Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is nhaA2 [H]

Identifier: 86608307

GI number: 86608307

Start: 855383

End: 856177

Strand: Direct

Name: nhaA2 [H]

Synonym: CYB_0825

Alternate gene names: 86608307

Gene position: 855383-856177 (Clockwise)

Preceding gene: 86608306

Following gene: 86608310

Centisome position: 28.08

GC content: 58.87

Gene sequence:

>795_bases
ATGCATAGGCTGGTGAGGATTTTTCGCGCTTGGGCTCGAGCTGGGCTTTTGTTCGGGCTGACGGTTCTGCTGGGAGTGGG
AAGTGGAGCTTCGGTTTTCCTACCCTCGGCGGCGGCTGCCCCGGCGGATTTGGAAGAGCAAGTGCTGCAGATCATTCGGA
AGAACCCCCAGGTGATTCTGGAAGCCGTGCAGGAATACCAGCAGCGACAGTACCAAGAGCAGCAGCAGCAACAGCAGCGG
CTGGCAGAAGAATTTGGCCGTCAACTGCGGGAGAACCCACGCGCCGTCATCGGAGATTCCCCTCGACTGGGATCCGACGC
TCTGCGGTTGGTGTTGGTGGAGTTCTCCGATTTTCAATGCCCCTTCTGCGCCCGCGCCCACAGCACCCTCAAGCAGTTCA
TGGCCGACCACGGGGATGAGGTGACCTTGGTGTACAAGCACCTGCCCCTGACCAGCATCCACCCAGAAGCGATGTCGGCT
GCCCGGGCTGCTTGGGCCGCCCAACGTCAAGGTAAGTTCTGGGAGTTTCACGACGAGCTGTTTGCCAACCAATCTCAGCT
TGGGGATGGGTTTTATGTGGCCACTGCTGAGAAGCTGGGCCTGAATATAGAAAAATTCAATCGGGATCGGCGCAGTCGGG
CGGCAGAACGCGCCATTCAGCGAGATATTGACTTGGCCTCTCAACTGGGCATTGGTGGCACTCCCCATTTCATCTTGAAC
GGCATTGCCTTCTCCGGTGCGCAGCCGCTGGAGGTGTTTGAGCAGACGCTGCAGCAGGCTAAGCAAGCCCTCTAG

Upstream 100 bases:

>100_bases
AATTCCTAACCCCCCCGAACGAGTGATAGACACTGTTGGGATCTGACAGTAGGCTGGGTGAGTTGCGACGGCTCTAGGCA
TGTTTGAGAGGGGGGTTGGG

Downstream 100 bases:

>100_bases
CCGGGAAAGTGCTCCGCACCGCTGACGCAAACAGAGTCTCAAGTCCAGATGTCGAGCCCCTACTGCTGTCCGGAGTGCGG
GGATGGGCTCCTGTTTCGAC

Product: DSBA thioredoxin domain-containing protein

Products: NA

Alternate protein names: Sodium/proton antiporter nhaA 2 [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MHRLVRIFRAWARAGLLFGLTVLLGVGSGASVFLPSAAAAPADLEEQVLQIIRKNPQVILEAVQEYQQRQYQEQQQQQQR
LAEEFGRQLRENPRAVIGDSPRLGSDALRLVLVEFSDFQCPFCARAHSTLKQFMADHGDEVTLVYKHLPLTSIHPEAMSA
ARAAWAAQRQGKFWEFHDELFANQSQLGDGFYVATAEKLGLNIEKFNRDRRSRAAERAIQRDIDLASQLGIGGTPHFILN
GIAFSGAQPLEVFEQTLQQAKQAL

Sequences:

>Translated_264_residues
MHRLVRIFRAWARAGLLFGLTVLLGVGSGASVFLPSAAAAPADLEEQVLQIIRKNPQVILEAVQEYQQRQYQEQQQQQQR
LAEEFGRQLRENPRAVIGDSPRLGSDALRLVLVEFSDFQCPFCARAHSTLKQFMADHGDEVTLVYKHLPLTSIHPEAMSA
ARAAWAAQRQGKFWEFHDELFANQSQLGDGFYVATAEKLGLNIEKFNRDRRSRAAERAIQRDIDLASQLGIGGTPHFILN
GIAFSGAQPLEVFEQTLQQAKQAL
>Mature_264_residues
MHRLVRIFRAWARAGLLFGLTVLLGVGSGASVFLPSAAAAPADLEEQVLQIIRKNPQVILEAVQEYQQRQYQEQQQQQQR
LAEEFGRQLRENPRAVIGDSPRLGSDALRLVLVEFSDFQCPFCARAHSTLKQFMADHGDEVTLVYKHLPLTSIHPEAMSA
ARAAWAAQRQGKFWEFHDELFANQSQLGDGFYVATAEKLGLNIEKFNRDRRSRAAERAIQRDIDLASQLGIGGTPHFILN
GIAFSGAQPLEVFEQTLQQAKQAL

Specific function: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons [H]

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR023171
- InterPro:   IPR004670
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA; PF06965 Na_H_antiport_1 [H]

EC number: NA

Molecular weight: Translated: 29579; Mature: 29579

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLVRIFRAWARAGLLFGLTVLLGVGSGASVFLPSAAAAPADLEEQVLQIIRKNPQVIL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHCCHHHHH
EAVQEYQQRQYQEQQQQQQRLAEEFGRQLRENPRAVIGDSPRLGSDALRLVLVEFSDFQC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCC
PFCARAHSTLKQFMADHGDEVTLVYKHLPLTSIHPEAMSAARAAWAAQRQGKFWEFHDEL
CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
FANQSQLGDGFYVATAEKLGLNIEKFNRDRRSRAAERAIQRDIDLASQLGIGGTPHFILN
HCCHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GIAFSGAQPLEVFEQTLQQAKQAL
HHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHRLVRIFRAWARAGLLFGLTVLLGVGSGASVFLPSAAAAPADLEEQVLQIIRKNPQVIL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHCCHHHHH
EAVQEYQQRQYQEQQQQQQRLAEEFGRQLRENPRAVIGDSPRLGSDALRLVLVEFSDFQC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCC
PFCARAHSTLKQFMADHGDEVTLVYKHLPLTSIHPEAMSAARAAWAAQRQGKFWEFHDEL
CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
FANQSQLGDGFYVATAEKLGLNIEKFNRDRRSRAAERAIQRDIDLASQLGIGGTPHFILN
HCCHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GIAFSGAQPLEVFEQTLQQAKQAL
HHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA