| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is nhaA2 [H]
Identifier: 86608307
GI number: 86608307
Start: 855383
End: 856177
Strand: Direct
Name: nhaA2 [H]
Synonym: CYB_0825
Alternate gene names: 86608307
Gene position: 855383-856177 (Clockwise)
Preceding gene: 86608306
Following gene: 86608310
Centisome position: 28.08
GC content: 58.87
Gene sequence:
>795_bases ATGCATAGGCTGGTGAGGATTTTTCGCGCTTGGGCTCGAGCTGGGCTTTTGTTCGGGCTGACGGTTCTGCTGGGAGTGGG AAGTGGAGCTTCGGTTTTCCTACCCTCGGCGGCGGCTGCCCCGGCGGATTTGGAAGAGCAAGTGCTGCAGATCATTCGGA AGAACCCCCAGGTGATTCTGGAAGCCGTGCAGGAATACCAGCAGCGACAGTACCAAGAGCAGCAGCAGCAACAGCAGCGG CTGGCAGAAGAATTTGGCCGTCAACTGCGGGAGAACCCACGCGCCGTCATCGGAGATTCCCCTCGACTGGGATCCGACGC TCTGCGGTTGGTGTTGGTGGAGTTCTCCGATTTTCAATGCCCCTTCTGCGCCCGCGCCCACAGCACCCTCAAGCAGTTCA TGGCCGACCACGGGGATGAGGTGACCTTGGTGTACAAGCACCTGCCCCTGACCAGCATCCACCCAGAAGCGATGTCGGCT GCCCGGGCTGCTTGGGCCGCCCAACGTCAAGGTAAGTTCTGGGAGTTTCACGACGAGCTGTTTGCCAACCAATCTCAGCT TGGGGATGGGTTTTATGTGGCCACTGCTGAGAAGCTGGGCCTGAATATAGAAAAATTCAATCGGGATCGGCGCAGTCGGG CGGCAGAACGCGCCATTCAGCGAGATATTGACTTGGCCTCTCAACTGGGCATTGGTGGCACTCCCCATTTCATCTTGAAC GGCATTGCCTTCTCCGGTGCGCAGCCGCTGGAGGTGTTTGAGCAGACGCTGCAGCAGGCTAAGCAAGCCCTCTAG
Upstream 100 bases:
>100_bases AATTCCTAACCCCCCCGAACGAGTGATAGACACTGTTGGGATCTGACAGTAGGCTGGGTGAGTTGCGACGGCTCTAGGCA TGTTTGAGAGGGGGGTTGGG
Downstream 100 bases:
>100_bases CCGGGAAAGTGCTCCGCACCGCTGACGCAAACAGAGTCTCAAGTCCAGATGTCGAGCCCCTACTGCTGTCCGGAGTGCGG GGATGGGCTCCTGTTTCGAC
Product: DSBA thioredoxin domain-containing protein
Products: NA
Alternate protein names: Sodium/proton antiporter nhaA 2 [H]
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MHRLVRIFRAWARAGLLFGLTVLLGVGSGASVFLPSAAAAPADLEEQVLQIIRKNPQVILEAVQEYQQRQYQEQQQQQQR LAEEFGRQLRENPRAVIGDSPRLGSDALRLVLVEFSDFQCPFCARAHSTLKQFMADHGDEVTLVYKHLPLTSIHPEAMSA ARAAWAAQRQGKFWEFHDELFANQSQLGDGFYVATAEKLGLNIEKFNRDRRSRAAERAIQRDIDLASQLGIGGTPHFILN GIAFSGAQPLEVFEQTLQQAKQAL
Sequences:
>Translated_264_residues MHRLVRIFRAWARAGLLFGLTVLLGVGSGASVFLPSAAAAPADLEEQVLQIIRKNPQVILEAVQEYQQRQYQEQQQQQQR LAEEFGRQLRENPRAVIGDSPRLGSDALRLVLVEFSDFQCPFCARAHSTLKQFMADHGDEVTLVYKHLPLTSIHPEAMSA ARAAWAAQRQGKFWEFHDELFANQSQLGDGFYVATAEKLGLNIEKFNRDRRSRAAERAIQRDIDLASQLGIGGTPHFILN GIAFSGAQPLEVFEQTLQQAKQAL >Mature_264_residues MHRLVRIFRAWARAGLLFGLTVLLGVGSGASVFLPSAAAAPADLEEQVLQIIRKNPQVILEAVQEYQQRQYQEQQQQQQR LAEEFGRQLRENPRAVIGDSPRLGSDALRLVLVEFSDFQCPFCARAHSTLKQFMADHGDEVTLVYKHLPLTSIHPEAMSA ARAAWAAQRQGKFWEFHDELFANQSQLGDGFYVATAEKLGLNIEKFNRDRRSRAAERAIQRDIDLASQLGIGGTPHFILN GIAFSGAQPLEVFEQTLQQAKQAL
Specific function: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023171 - InterPro: IPR004670 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA; PF06965 Na_H_antiport_1 [H]
EC number: NA
Molecular weight: Translated: 29579; Mature: 29579
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRLVRIFRAWARAGLLFGLTVLLGVGSGASVFLPSAAAAPADLEEQVLQIIRKNPQVIL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHCCHHHHH EAVQEYQQRQYQEQQQQQQRLAEEFGRQLRENPRAVIGDSPRLGSDALRLVLVEFSDFQC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCC PFCARAHSTLKQFMADHGDEVTLVYKHLPLTSIHPEAMSAARAAWAAQRQGKFWEFHDEL CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH FANQSQLGDGFYVATAEKLGLNIEKFNRDRRSRAAERAIQRDIDLASQLGIGGTPHFILN HCCHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GIAFSGAQPLEVFEQTLQQAKQAL HHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MHRLVRIFRAWARAGLLFGLTVLLGVGSGASVFLPSAAAAPADLEEQVLQIIRKNPQVIL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHCCHHHHH EAVQEYQQRQYQEQQQQQQRLAEEFGRQLRENPRAVIGDSPRLGSDALRLVLVEFSDFQC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCC PFCARAHSTLKQFMADHGDEVTLVYKHLPLTSIHPEAMSAARAAWAAQRQGKFWEFHDEL CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH FANQSQLGDGFYVATAEKLGLNIEKFNRDRRSRAAERAIQRDIDLASQLGIGGTPHFILN HCCHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GIAFSGAQPLEVFEQTLQQAKQAL HHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA