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The map label for this gene is sll1405 [C]

Identifier: 86608302

GI number: 86608302

Start: 849698

End: 850123

Strand: Direct

Name: sll1405 [C]

Synonym: CYB_0820

Alternate gene names: 86608302

Gene position: 849698-850123 (Clockwise)

Preceding gene: 86608301

Following gene: 86608305

Centisome position: 27.89

GC content: 59.62

Gene sequence:

>426_bases
ATGCGCATCCCCGAAGAGAACTTCCGAGCTGGCGAGATCAACATCGTGCCCCTGATCGATGTCATCTTCTCGATCTTGGT
GTTTTTCGTGATCGCCAGCCTGGTGCTCACCCGCTCCGAGGCTCTGGATGTGAACCTGCCGGACGCGACCACAGCCGAAG
TTCGTCTGCAGCCGGATGTAACGGTGAGCCTGACGGCGGAAGGACAGATTGCTGTCAATCAGGAGAAGATTGCCGATATC
TCTGCTCTGATCCCAGCAGTGGAACGCATCCTGGCCGAGAAGCCGGCTGAAGGGCGCCGCTTGGTGGTGATCAACGCTGA
TTTGGCCCTCTCCCACGGCAAGGTGGTGGAGGTGATGGATACTCTGCAGCGGGTGCCCAATGTCAGCCTGGCAATTGCCG
CCCGCCGCCCCAGCAGTAATCGGTAG

Upstream 100 bases:

>100_bases
GATGCAGGCCCAACAGCTTTCCCAGTATTCCTACACCCAATCTAGCCCCAGTGGCAGCTCCACCCTTCCCCCCTACTCCT
CGCTTGAGCCCTCCTAACCT

Downstream 100 bases:

>100_bases
CCAGCTTAGGATTTGGGCCAGTTTTGTCAAATATAGTCATTTCAGGTTAGGGTGAGACGCCTAGGCTACTGGTCGCGCCA
GCGGGACGGAGTCCTTGAAA

Product: ExbD/TolR family proton transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MRIPEENFRAGEINIVPLIDVIFSILVFFVIASLVLTRSEALDVNLPDATTAEVRLQPDVTVSLTAEGQIAVNQEKIADI
SALIPAVERILAEKPAEGRRLVVINADLALSHGKVVEVMDTLQRVPNVSLAIAARRPSSNR

Sequences:

>Translated_141_residues
MRIPEENFRAGEINIVPLIDVIFSILVFFVIASLVLTRSEALDVNLPDATTAEVRLQPDVTVSLTAEGQIAVNQEKIADI
SALIPAVERILAEKPAEGRRLVVINADLALSHGKVVEVMDTLQRVPNVSLAIAARRPSSNR
>Mature_141_residues
MRIPEENFRAGEINIVPLIDVIFSILVFFVIASLVLTRSEALDVNLPDATTAEVRLQPDVTVSLTAEGQIAVNQEKIADI
SALIPAVERILAEKPAEGRRLVVINADLALSHGKVVEVMDTLQRVPNVSLAIAARRPSSNR

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. [C]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15316; Mature: 15316

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPEENFRAGEINIVPLIDVIFSILVFFVIASLVLTRSEALDVNLPDATTAEVRLQPDV
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCC
TVSLTAEGQIAVNQEKIADISALIPAVERILAEKPAEGRRLVVINADLALSHGKVVEVMD
EEEEEECCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCCHHHHHH
TLQRVPNVSLAIAARRPSSNR
HHHHCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MRIPEENFRAGEINIVPLIDVIFSILVFFVIASLVLTRSEALDVNLPDATTAEVRLQPDV
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCC
TVSLTAEGQIAVNQEKIADISALIPAVERILAEKPAEGRRLVVINADLALSHGKVVEVMD
EEEEEECCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCCHHHHHH
TLQRVPNVSLAIAARRPSSNR
HHHHCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]