| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608300
Identifier: 86608300
GI number: 86608300
Start: 846925
End: 848778
Strand: Reverse
Name: 86608300
Synonym: CYB_0818
Alternate gene names: NA
Gene position: 848778-846925 (Counterclockwise)
Preceding gene: 86608303
Following gene: 86608299
Centisome position: 27.86
GC content: 60.14
Gene sequence:
>1854_bases ATGAAATTCAGACGCTGGTTGGGTCTTTGCTGCGCCGGCTTGATGGCCTTGCTGTTGACGGCTTGCGGCAAGGGATCCGC CCCCTACGACAGCATCGTGGTCAATTTTGTAAACACGGCCACCCCCAGTCAGATTGCTGCTATCGCTAAAGAGTATCATT TGACGCTCCGCCCCAGCAGCGACAGCGCTTTTGCCCGCCAGGAAGCGATCTATCTGTTTGACGTGGATGCCAACCACCTG GGATCCACGCGGCGGCTGGTTAAGCGGCTCACCGACGAAGCTTTGATCGAGTATGCTCACCCCAACTATCAATTCCAGGC GGCTTTCGTGCCCAACGACCGCCTCTATCCCCAGCAATGGAACCTCAGGGCCATCCGCATGCCGGAAGCCTGGGACATCT CCCAAGGGGAAGGGGTGACGGTAGCCGTGGTGGACACAGGAGTAACCCGAGTTCCCGACCTGGCCCAAACCCAATTTGTT AAGGGCTATGACTTTGTGGACGACGATGAGGAGCCGGAAGACCTCAACGGCCACGGCACCCATGTGGCGGGAACCATCGC CCAATCCACCAACAATGTCTTGGGTGTAGCCGGCATTGCCTTCAAGGCCAAGATCATGCCGGTACGGGTGTTGGATGCCA ATGGCTTTGGATCCCTGTCGGATGTGGTGGAAGGGATCCGCTATGCTGCCGACCACGGGGCTACGATCATCAACCTCAGC CTGGGTAGCCGCGCTTCTGCCCAACTGATGGAAGAGGCGGTGGCCTATGCCCACAGTAAGGGGGTGACGGTGATCGCAGC CGCTGGCAACGAAAACTCCAACCAGGTGAGCTACCCGGCCCGCTACCCGCATGTGATCGCTGTCTCGGCCACGGGGCCCA ACGGGGAGAAAGCCCCCTACTCCAACTATGGGGTGGGGGTGGACATCTCTGCTCCCGGCGGAGCCAAAACGCCTGATCAC CCCGAGTACGGCATTCTGCAGCAAACCATCAATCGTCGTAACCCCAACGAGCCGGTCTTTGCCTACTTCCAAGGCACCAG CATGGCCACTCCCCACGTAGCCGGTGTGGCAGCCCTGATCCAGGCTCAGGGCATCAAAGACCCGGACAAGGTGGAAGAAG TGCTGAAAATGTCGGCTACCCCGGTGCCCGGCGACAAACAGAACTTCTACGGGGCTGGTCGTTTGGATGCAGCCAAGGCG CTGGCCAGGGCCACAGGGCAACAGGAGGAAAACCCCTTGGTGCTCTGGTTGAAGGACTTCCTGCAGTACCTGAACAACAA TGGCTACCTCAACCCACGCTTCTGGTTCGATGGTGGCCCGATTGCTCTGGTGCCGAAGCTGCTGATGGTGGTGGGCGGCT ACATTATCCTGGTGCTGATCCGCTGGTGGCTGGCTCCCAAGCGGCTGCTGCAGACGGTGCCTTTGCTGGCTGGGATGCTT TTGGGCAGTGCCGGTCTTTTCCCCTTGCAGGGGTTGGCGATTGTCGGTGGCCCCCGTTGGCCCTTCCAATTGGCGGGTAG CTCCCTGCCGGAGTTGGGCACCGCCTTTGCCCAGACCAATGCCTTGAACCCCCTATTTGCCAGCGTGTTGATCCCAGGCC TGTTGATGTTGCTGCTCCTGGGCCATCGGCGCTGGCGCTGGGCGGTGATTGGCTTGTGCATCGGCATGGCCTCGCATCTG CTCTTGTCCGGATCCCTGTTTTATGAGGGGGTGCTATGGCTTGGATCCTCTGCTTGGTTGGGTCGCTCCTTCTTGCTCTT CAATGGCTTGCTCTGCCTGGGCCTGGCCTACTTGGGAGCGCAAGCGGCTACGGAATCTCAATCCACGGCAACCGGGCTGG CGCTGAGGCAGTGA
Upstream 100 bases:
>100_bases CTTTTGGCAATTTTGCCCCCATGCCGGATCTCATCTCGTCAATTGTCAATCCAGAGGGCATACTGGTTGCAACATTTTTT GGATCCCGAGGGCGTGAATT
Downstream 100 bases:
>100_bases TGCAAGAGTACAGCGGTACCATCCAGTTCCTGGATATCGAAGGGGGAGTGTGGGTGCTGACGCTGCCTTCCGGCGAGCAC TATGCCCTTTTCCGTGCCCC
Product: S8A family peptidase
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 617; Mature: 617
Protein sequence:
>617_residues MKFRRWLGLCCAGLMALLLTACGKGSAPYDSIVVNFVNTATPSQIAAIAKEYHLTLRPSSDSAFARQEAIYLFDVDANHL GSTRRLVKRLTDEALIEYAHPNYQFQAAFVPNDRLYPQQWNLRAIRMPEAWDISQGEGVTVAVVDTGVTRVPDLAQTQFV KGYDFVDDDEEPEDLNGHGTHVAGTIAQSTNNVLGVAGIAFKAKIMPVRVLDANGFGSLSDVVEGIRYAADHGATIINLS LGSRASAQLMEEAVAYAHSKGVTVIAAAGNENSNQVSYPARYPHVIAVSATGPNGEKAPYSNYGVGVDISAPGGAKTPDH PEYGILQQTINRRNPNEPVFAYFQGTSMATPHVAGVAALIQAQGIKDPDKVEEVLKMSATPVPGDKQNFYGAGRLDAAKA LARATGQQEENPLVLWLKDFLQYLNNNGYLNPRFWFDGGPIALVPKLLMVVGGYIILVLIRWWLAPKRLLQTVPLLAGML LGSAGLFPLQGLAIVGGPRWPFQLAGSSLPELGTAFAQTNALNPLFASVLIPGLLMLLLLGHRRWRWAVIGLCIGMASHL LLSGSLFYEGVLWLGSSAWLGRSFLLFNGLLCLGLAYLGAQAATESQSTATGLALRQ
Sequences:
>Translated_617_residues MKFRRWLGLCCAGLMALLLTACGKGSAPYDSIVVNFVNTATPSQIAAIAKEYHLTLRPSSDSAFARQEAIYLFDVDANHL GSTRRLVKRLTDEALIEYAHPNYQFQAAFVPNDRLYPQQWNLRAIRMPEAWDISQGEGVTVAVVDTGVTRVPDLAQTQFV KGYDFVDDDEEPEDLNGHGTHVAGTIAQSTNNVLGVAGIAFKAKIMPVRVLDANGFGSLSDVVEGIRYAADHGATIINLS LGSRASAQLMEEAVAYAHSKGVTVIAAAGNENSNQVSYPARYPHVIAVSATGPNGEKAPYSNYGVGVDISAPGGAKTPDH PEYGILQQTINRRNPNEPVFAYFQGTSMATPHVAGVAALIQAQGIKDPDKVEEVLKMSATPVPGDKQNFYGAGRLDAAKA LARATGQQEENPLVLWLKDFLQYLNNNGYLNPRFWFDGGPIALVPKLLMVVGGYIILVLIRWWLAPKRLLQTVPLLAGML LGSAGLFPLQGLAIVGGPRWPFQLAGSSLPELGTAFAQTNALNPLFASVLIPGLLMLLLLGHRRWRWAVIGLCIGMASHL LLSGSLFYEGVLWLGSSAWLGRSFLLFNGLLCLGLAYLGAQAATESQSTATGLALRQ >Mature_617_residues MKFRRWLGLCCAGLMALLLTACGKGSAPYDSIVVNFVNTATPSQIAAIAKEYHLTLRPSSDSAFARQEAIYLFDVDANHL GSTRRLVKRLTDEALIEYAHPNYQFQAAFVPNDRLYPQQWNLRAIRMPEAWDISQGEGVTVAVVDTGVTRVPDLAQTQFV KGYDFVDDDEEPEDLNGHGTHVAGTIAQSTNNVLGVAGIAFKAKIMPVRVLDANGFGSLSDVVEGIRYAADHGATIINLS LGSRASAQLMEEAVAYAHSKGVTVIAAAGNENSNQVSYPARYPHVIAVSATGPNGEKAPYSNYGVGVDISAPGGAKTPDH PEYGILQQTINRRNPNEPVFAYFQGTSMATPHVAGVAALIQAQGIKDPDKVEEVLKMSATPVPGDKQNFYGAGRLDAAKA LARATGQQEENPLVLWLKDFLQYLNNNGYLNPRFWFDGGPIALVPKLLMVVGGYIILVLIRWWLAPKRLLQTVPLLAGML LGSAGLFPLQGLAIVGGPRWPFQLAGSSLPELGTAFAQTNALNPLFASVLIPGLLMLLLLGHRRWRWAVIGLCIGMASHL LLSGSLFYEGVLWLGSSAWLGRSFLLFNGLLCLGLAYLGAQAATESQSTATGLALRQ
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI76443679, Length=133, Percent_Identity=34.5864661654135, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25141268, Length=182, Percent_Identity=31.3186813186813, Blast_Score=70, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71983555, Length=182, Percent_Identity=31.3186813186813, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6324576, Length=341, Percent_Identity=30.791788856305, Blast_Score=110, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6320775, Length=240, Percent_Identity=36.6666666666667, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319893, Length=259, Percent_Identity=31.2741312741313, Blast_Score=94, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 66380; Mature: 66380
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRRWLGLCCAGLMALLLTACGKGSAPYDSIVVNFVNTATPSQIAAIAKEYHLTLRPSS CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCC DSAFARQEAIYLFDVDANHLGSTRRLVKRLTDEALIEYAHPNYQFQAAFVPNDRLYPQQW CCHHHHCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC NLRAIRMPEAWDISQGEGVTVAVVDTGVTRVPDLAQTQFVKGYDFVDDDEEPEDLNGHGT CEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC HVAGTIAQSTNNVLGVAGIAFKAKIMPVRVLDANGFGSLSDVVEGIRYAADHGATIINLS EEEEEHHHCCCCEEEEECEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEE LGSRASAQLMEEAVAYAHSKGVTVIAAAGNENSNQVSYPARYPHVIAVSATGPNGEKAPY CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCCC SNYGVGVDISAPGGAKTPDHPEYGILQQTINRRNPNEPVFAYFQGTSMATPHVAGVAALI CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHH QAQGIKDPDKVEEVLKMSATPVPGDKQNFYGAGRLDAAKALARATGQQEENPLVLWLKDF HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHH LQYLNNNGYLNPRFWFDGGPIALVPKLLMVVGGYIILVLIRWWLAPKRLLQTVPLLAGML HHHHCCCCEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LGSAGLFPLQGLAIVGGPRWPFQLAGSSLPELGTAFAQTNALNPLFASVLIPGLLMLLLL HCCCCCCCCCCEEEECCCCCCHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH GHRRWRWAVIGLCIGMASHLLLSGSLFYEGVLWLGSSAWLGRSFLLFNGLLCLGLAYLGA CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH QAATESQSTATGLALRQ HHHCCCCCHHCCCEECC >Mature Secondary Structure MKFRRWLGLCCAGLMALLLTACGKGSAPYDSIVVNFVNTATPSQIAAIAKEYHLTLRPSS CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCC DSAFARQEAIYLFDVDANHLGSTRRLVKRLTDEALIEYAHPNYQFQAAFVPNDRLYPQQW CCHHHHCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC NLRAIRMPEAWDISQGEGVTVAVVDTGVTRVPDLAQTQFVKGYDFVDDDEEPEDLNGHGT CEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC HVAGTIAQSTNNVLGVAGIAFKAKIMPVRVLDANGFGSLSDVVEGIRYAADHGATIINLS EEEEEHHHCCCCEEEEECEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEE LGSRASAQLMEEAVAYAHSKGVTVIAAAGNENSNQVSYPARYPHVIAVSATGPNGEKAPY CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCCC SNYGVGVDISAPGGAKTPDHPEYGILQQTINRRNPNEPVFAYFQGTSMATPHVAGVAALI CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHH QAQGIKDPDKVEEVLKMSATPVPGDKQNFYGAGRLDAAKALARATGQQEENPLVLWLKDF HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHH LQYLNNNGYLNPRFWFDGGPIALVPKLLMVVGGYIILVLIRWWLAPKRLLQTVPLLAGML HHHHCCCCEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LGSAGLFPLQGLAIVGGPRWPFQLAGSSLPELGTAFAQTNALNPLFASVLIPGLLMLLLL HCCCCCCCCCCEEEECCCCCCHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH GHRRWRWAVIGLCIGMASHLLLSGSLFYEGVLWLGSSAWLGRSFLLFNGLLCLGLAYLGA CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH QAATESQSTATGLALRQ HHHCCCCCHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]