| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is maf [C]
Identifier: 86608193
GI number: 86608193
Start: 724155
End: 724748
Strand: Direct
Name: maf [C]
Synonym: CYB_0709
Alternate gene names: 86608193
Gene position: 724155-724748 (Clockwise)
Preceding gene: 86608188
Following gene: 86608201
Centisome position: 23.77
GC content: 61.45
Gene sequence:
>594_bases ATGTTGCCTCCTATCGTACTGGCCTCGCAATCCCCTGCCCGCCGCCAATTGTTAAAGGCTGCCGGGATCCCTTTTCGCGT TCAGCCCAGCTATTTTGACGAAAGCCAAATCAAAAGCTCAGATCCCGTGGAGCTGGTGCAGAAGCTGGCCTCGGCGAAAG CCGAAGTGGTGGCGGCCCAGCAACGGGAGCCCGTCTTGGTCGTGGGGGCCGACTCCGTGCTCTACCTAGATGGCGAGATC CTGGGCAAGCCGCCCAATGCCCTAGAGGCGGAACGGCGCCTGCGGCAAATGCGGGGCGAAGTGGGAGAGCTCTACACAGG CCATGCCTTGATTGACACGAAGCAGAACCGCCGCCTCACCCACTATGCGGTGACGCGGGTGTTTTTTGCCAAGCCCAGCG ACGAGGAAATCCGCGCCTACGTGGCCACCGGTGAGCCGCTCAATTGTGCTGGCTGTTTTGCCATCGATGGTCGTGGCAGC CTGTTTGTGGAGCGGATCGAGGGGTGCCCCGGCAATGTTATCGGGCTGAGCTTGCCCCTGCTGCGGCGCATGATGCAGGA GTTGGGCTATTCCCTCACCGATGCTTGGAGCTAG
Upstream 100 bases:
>100_bases CATCAGGCGCATACTAACTAAGCTAATGGAAACTAGCTCACAGAGCGAACTTCCCCTAAGCAAACGTCCAGGCTTTGGGT GTTAATTAGGTGTTGAGTCG
Downstream 100 bases:
>100_bases CCGTCGAGGTGTTGCTTGAGCAGGTCGTTGGCCAGCTTTGGATCTGCCCGTCCCTGAGTTTTTTTCATCAATTGCCCGAC AAAGTAGCCGAAGAGCTTGG
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MLPPIVLASQSPARRQLLKAAGIPFRVQPSYFDESQIKSSDPVELVQKLASAKAEVVAAQQREPVLVVGADSVLYLDGEI LGKPPNALEAERRLRQMRGEVGELYTGHALIDTKQNRRLTHYAVTRVFFAKPSDEEIRAYVATGEPLNCAGCFAIDGRGS LFVERIEGCPGNVIGLSLPLLRRMMQELGYSLTDAWS
Sequences:
>Translated_197_residues MLPPIVLASQSPARRQLLKAAGIPFRVQPSYFDESQIKSSDPVELVQKLASAKAEVVAAQQREPVLVVGADSVLYLDGEI LGKPPNALEAERRLRQMRGEVGELYTGHALIDTKQNRRLTHYAVTRVFFAKPSDEEIRAYVATGEPLNCAGCFAIDGRGS LFVERIEGCPGNVIGLSLPLLRRMMQELGYSLTDAWS >Mature_197_residues MLPPIVLASQSPARRQLLKAAGIPFRVQPSYFDESQIKSSDPVELVQKLASAKAEVVAAQQREPVLVVGADSVLYLDGEI LGKPPNALEAERRLRQMRGEVGELYTGHALIDTKQNRRLTHYAVTRVFFAKPSDEEIRAYVATGEPLNCAGCFAIDGRGS LFVERIEGCPGNVIGLSLPLLRRMMQELGYSLTDAWS
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=199, Percent_Identity=34.1708542713568, Blast_Score=98, Evalue=6e-21, Organism=Homo sapiens, GI291045183, Length=194, Percent_Identity=32.4742268041237, Blast_Score=82, Evalue=2e-16, Organism=Homo sapiens, GI291045181, Length=135, Percent_Identity=32.5925925925926, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI310133124, Length=135, Percent_Identity=32.5925925925926, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI87081830, Length=189, Percent_Identity=37.037037037037, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1789646, Length=177, Percent_Identity=36.1581920903955, Blast_Score=102, Evalue=1e-23, Organism=Caenorhabditis elegans, GI193202443, Length=186, Percent_Identity=35.4838709677419, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI78706856, Length=182, Percent_Identity=33.5164835164835, Blast_Score=87, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21652; Mature: 21652
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPPIVLASQSPARRQLLKAAGIPFRVQPSYFDESQIKSSDPVELVQKLASAKAEVVAAQ CCCCEEEECCCHHHHHHHHHCCCCEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHC QREPVLVVGADSVLYLDGEILGKPPNALEAERRLRQMRGEVGELYTGHALIDTKQNRRLT CCCCEEEEECCEEEEECCEEECCCCCHHHHHHHHHHHHHHHHCEEECCEEEECCCCCCHH HYAVTRVFFAKPSDEEIRAYVATGEPLNCAGCFAIDGRGSLFVERIEGCPGNVIGLSLPL HHHHHHHEECCCCCHHEEEEEECCCCCCCEEEEEECCCCCEEHEECCCCCCCEEEHHHHH LRRMMQELGYSLTDAWS HHHHHHHHCCCCCCCCC >Mature Secondary Structure MLPPIVLASQSPARRQLLKAAGIPFRVQPSYFDESQIKSSDPVELVQKLASAKAEVVAAQ CCCCEEEECCCHHHHHHHHHCCCCEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHC QREPVLVVGADSVLYLDGEILGKPPNALEAERRLRQMRGEVGELYTGHALIDTKQNRRLT CCCCEEEEECCEEEEECCEEECCCCCHHHHHHHHHHHHHHHHCEEECCEEEECCCCCCHH HYAVTRVFFAKPSDEEIRAYVATGEPLNCAGCFAIDGRGSLFVERIEGCPGNVIGLSLPL HHHHHHHEECCCCCHHEEEEEECCCCCCCEEEEEECCCCCEEHEECCCCCCCEEEHHHHH LRRMMQELGYSLTDAWS HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA